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    PEX10 peroxisomal biogenesis factor 10 [ Bos taurus (cattle) ]

    Gene ID: 614539, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PEX10provided by VGNC
    Official Full Name
    peroxisomal biogenesis factor 10provided by VGNC
    Primary source
    VGNC:VGNC:106861
    See related
    BGD:BT14582; Ensembl:ENSBTAG00000009309
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (50437169..50442759)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 4 (inactive) Neighboring gene phospholipase C eta 2 Neighboring gene retention in endoplasmic reticulum sorting receptor 1 Neighboring gene MORN repeat containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC143025

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into peroxisome matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisome biogenesis factor 10
    NP_001069801.1
    XP_005217172.1
    XP_024832224.1
    XP_024832225.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076333.1 → NP_001069801.1  peroxisome biogenesis factor 10

      See identical proteins and their annotated locations for NP_001069801.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120410
      UniProtKB/TrEMBL
      Q0VC07
      Related
      ENSBTAP00000012262.5, ENSBTAT00000012262.7
      Conserved Domains (1) summary
      pfam04757
      Location:18 → 210
      Pex2_Pex12; Pex2 / Pex12 amino terminal region

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      50437169..50442759
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024976457.2 → XP_024832225.1  peroxisome biogenesis factor 10 isoform X2

      Related
      ENSBTAP00000103523.1, ENSBTAT00000108133.1
      Conserved Domains (2) summary
      pfam04757
      Location:18 → 235
      Pex2_Pex12; Pex2 / Pex12 amino terminal region
      cd16527
      Location:290 → 328
      RING-HC_PEX10; RING finger, HC subclass, found in peroxin-10 (PEX10) and similar proteins

    2. XM_024976456.2 → XP_024832224.1  peroxisome biogenesis factor 10 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M343
      Conserved Domains (1) summary
      pfam04757
      Location:18 → 222
      Pex2_Pex12; Pex2 / Pex12 amino terminal region

    3. XM_005217115.4 → XP_005217172.1  peroxisome biogenesis factor 10 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LTU2
      Related
      ENSBTAP00000060516.1, ENSBTAT00000083916.2
      Conserved Domains (2) summary
      pfam04757
      Location:18 → 216
      Pex2_Pex12; Pex2 / Pex12 amino terminal region
      pfam13639
      Location:271 → 309
      zf-RING_2; Ring finger domain
    Nucleotide Protein Strain
    Heading Accession and Version

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