U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TBC1D31 TBC1 domain family member 31 [ Bos taurus (cattle) ]

    Gene ID: 511062, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TBC1D31provided by VGNC
    Official Full Name
    TBC1 domain family member 31provided by VGNC
    Primary source
    VGNC:VGNC:35642
    See related
    BGD:BT15063; Ensembl:ENSBTAG00000021156
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    WDR67
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 14
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (16631180..16698200, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member A Neighboring gene uncharacterized LOC104974006 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene derlin 1 Neighboring gene zinc fingers and homeoboxes 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC137686

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    TBC1 domain family member 31
    Names
    WD repeat domain 67
    WD repeat-containing protein 67

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046073.2 → NP_001039538.1  TBC1 domain family member 31

      See identical proteins and their annotated locations for NP_001039538.1

      Status: PROVISIONAL

      Source sequence(s)
      BC114127
      UniProtKB/Swiss-Prot
      Q29RL0
      UniProtKB/TrEMBL
      A0A3Q1MRM7
      Related
      ENSBTAP00000094903.1, ENSBTAT00000127993.1
      Conserved Domains (6) summary
      COG2319
      Location:44 → 346
      WD40; WD40 repeat [General function prediction only]
      pfam15346
      Location:693 → 849
      ARGLU; Arginine and glutamate-rich 1
      sd00039
      Location:46 → 81
      7WD40; WD40 repeat [structural motif]
      cl02495
      Location:428 → 609
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl02567
      Location:48 → 334
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl23750
      Location:706 → 833
      vATP-synt_E; ATP synthase (E/31 kDa) subunit

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16631180..16698200 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025001497.2 → XP_024857265.1  TBC1 domain family member 31 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MRM7
      Related
      ENSBTAP00000098307.1, ENSBTAT00000097079.1
      Conserved Domains (5) summary
      sd00039
      Location:46 → 81
      7WD40; WD40 repeat [structural motif]
      pfam05672
      Location:690 → 794
      MAP7; MAP7 (E-MAP-115) family
      cl02495
      Location:428 → 605
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl25539
      Location:48 → 334
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:690 → 982
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_005215359.5 → XP_005215416.1  TBC1 domain family member 31 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MRM7, A0A3Q1MZD4
      Related
      ENSBTAP00000061560.1, ENSBTAT00000074159.2
      Conserved Domains (6) summary
      COG2319
      Location:44 → 346
      WD40; WD40 repeat [General function prediction only]
      pfam15346
      Location:690 → 850
      ARGLU; Arginine and glutamate-rich 1
      sd00039
      Location:46 → 81
      7WD40; WD40 repeat [structural motif]
      cl02495
      Location:428 → 609
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl02567
      Location:48 → 334
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl23750
      Location:706 → 834
      vATP-synt_E; ATP synthase (E/31 kDa) subunit

    3. XM_059893183.1 → XP_059749166.1  TBC1 domain family member 31 isoform X2

    4. XM_005215358.5 → XP_005215415.1  TBC1 domain family member 31 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRM7
      Related
      ENSBTAP00000028197.4, ENSBTAT00000028197.5
      Conserved Domains (6) summary
      COG2319
      Location:44 → 346
      WD40; WD40 repeat [General function prediction only]
      pfam15346
      Location:693 → 850
      ARGLU; Arginine and glutamate-rich 1
      sd00039
      Location:46 → 81
      7WD40; WD40 repeat [structural motif]
      cl02495
      Location:428 → 609
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl02567
      Location:48 → 334
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl23750
      Location:706 → 834
      vATP-synt_E; ATP synthase (E/31 kDa) subunit

    5. XM_059893184.1 → XP_059749167.1  TBC1 domain family member 31 isoform X6

    6. XM_010811949.4 → XP_010810251.1  TBC1 domain family member 31 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MRM7
      Conserved Domains (4) summary
      sd00039
      Location:29 → 65
      7WD40; WD40 repeat [structural motif]
      cl02495
      Location:327 → 504
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl25539
      Location:14 → 233
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl25732
      Location:589 → 882
      SMC_N; RecF/RecN/SMC N terminal domain

    7. XM_059893186.1 → XP_059749169.1  TBC1 domain family member 31 isoform X7

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29RL0.1 GenPept UniProtKB/Swiss-Prot:Q29RL0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.