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    Spetex-2Fl1 Spetex-2F protein like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360998, updated on 29-Feb-2024

    Summary

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    Official Symbol
    Spetex-2Fl1provided by RGD
    Official Full Name
    Spetex-2F protein like 1provided by RGD
    Primary source
    RGD:1588537
    See related
    Ensembl:ENSRNOG00000062590 AllianceGenome:RGD:1588537
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Adrenal (RPKM 465.4), Brain (RPKM 312.2) and 2 other tissues See more
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    Genomic context

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    Location:
    9q12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (13400240..13428512, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (10076949..10085216)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (12415121..12429048)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480498 Neighboring gene reticulocalbin-1-like Neighboring gene uncharacterized LOC134480501 Neighboring gene uncharacterized LOC134480500

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein Spetex-2Fl1
    Names
    rCG43589-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      13400240..13428512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063267999.1 → XP_063124069.1  uncharacterized protein Spetex-2Fl1 isoform X2

    2. XM_039084445.2 → XP_038940373.2  uncharacterized protein Spetex-2Fl1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases