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    LOC106588671 DNA topoisomerase 2-beta-like [ Salmo salar (Atlantic salmon) ]

    Gene ID: 106588671, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC106588671
    Gene description
    DNA topoisomerase 2-beta-like
    See related
    Ensembl:ENSSSAG00000054874
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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    Genomic context

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    Location:
    chromosome: ssa27
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    102 current Ssal_v3.1 (GCF_905237065.1) ssa27 NC_059468.1 (20689135..20719614, complement)
    100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa27 NC_027326.1 (20249142..20278516, complement)

    Chromosome ssa27 - NC_059468.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1 group D member 2-like Neighboring gene thyroid hormone receptor beta Neighboring gene retinoic acid receptor alpha-A-like Neighboring gene peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like Neighboring gene leucine-rich repeat-containing protein 3B-like Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA topological change IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in resolution of meiotic recombination intermediates IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sister chromatid segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA topoisomerase 2-beta-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ssal_v3.1

    Genomic

    1. NC_059468.1 Reference Ssal_v3.1

      Range
      20689135..20719614 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014177891.2 → XP_014033366.2  DNA topoisomerase 2-beta-like isoform X3

      Related
      ENSSSAP00000084842.2, ENSSSAT00000118676.2

    2. XM_014177893.2 → XP_014033368.2  DNA topoisomerase 2-beta-like isoform X5

      Related
      ENSSSAP00000084673.2, ENSSSAT00000118505.2

    3. XM_014177892.2 → XP_014033367.2  DNA topoisomerase 2-beta-like isoform X4

      Related
      ENSSSAP00000085553.2, ENSSSAT00000119418.2

    4. XM_014177890.2 → XP_014033365.2  DNA topoisomerase 2-beta-like isoform X2

      Related
      ENSSSAP00000085039.2, ENSSSAT00000118876.2

    5. XM_014177889.2 → XP_014033364.2  DNA topoisomerase 2-beta-like isoform X1

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases