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    LOC106570382 proteasome subunit alpha type-2 [ Salmo salar (Atlantic salmon) ]

    Gene ID: 106570382, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC106570382
    Gene description
    proteasome subunit alpha type-2
    See related
    Ensembl:ENSSSAG00000026601
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Also known as
    PSA2
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    Genomic context

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    Location:
    chromosome: ssa14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current Ssal_v3.1 (GCF_905237065.1) ssa14 NC_059455.1 (79368894..79376793)
    100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa14 NC_027313.1 (72798127..72806029)

    Chromosome ssa14 - NC_059455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106570379 Neighboring gene succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Neighboring gene coiled-coil domain containing 127b Neighboring gene spore coat protein SP85-like Neighboring gene basic salivary proline-rich protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome core complex, alpha-subunit complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit alpha type-2
    XP_013998121.1
    XP_013998122.1
    XP_013998123.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ssal_v3.1

    Genomic

    1. NC_059455.1 Reference Ssal_v3.1

      Range
      79368894..79376793
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014142647.2 → XP_013998122.1  proteasome subunit alpha type-2

      UniProtKB/TrEMBL
      B5X5N7, B5X8S5
      Conserved Domains (1) summary
      cd03750
      Location:26 → 251
      proteasome_alpha_type_2; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

    2. XM_014142646.2 → XP_013998121.1  proteasome subunit alpha type-2

      UniProtKB/TrEMBL
      B5X5N7, B5X8S5
      Related
      ENSSSAP00000026289.1, ENSSSAT00000043084.2
      Conserved Domains (1) summary
      cd03750
      Location:26 → 251
      proteasome_alpha_type_2; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

    3. XM_014142648.2 → XP_013998123.1  proteasome subunit alpha type-2

      UniProtKB/TrEMBL
      B5X5N7, B5X8S5
      Related
      ENSSSAP00000075313.2, ENSSSAT00000108714.2
      Conserved Domains (1) summary
      cd03750
      Location:26 → 251
      proteasome_alpha_type_2; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
    Nucleotide Protein
    Heading Accession and Version

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