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    BCL9 BCL9 transcription coactivator [ Bos taurus (cattle) ]

    Gene ID: 788729, updated on 6-Jun-2024

    Summary

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    Official Symbol
    BCL9provided by VGNC
    Official Full Name
    BCL9 transcription coactivatorprovided by VGNC
    Primary source
    VGNC:VGNC:58092
    See related
    Ensembl:ENSBTAG00000002422
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See BCL9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (22002059..22098080, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344847 Neighboring gene acid phosphatase 6, lysophosphatidic Neighboring gene uncharacterized LOC132344846 Neighboring gene olfactory receptor family 13 subfamily L member 2 Neighboring gene olfactory receptor family 13 subfamily L member 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of beta-catenin-TCF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell CLL/lymphoma 9 protein
    Names
    B cell CLL/lymphoma 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      22002059..22098080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024989978.2 → XP_024845746.1  B-cell CLL/lymphoma 9 protein isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M8P9, E1BPF3
      Related
      ENSBTAP00000003141.6, ENSBTAT00000003141.7
      Conserved Domains (2) summary
      pfam11502
      Location:350 → 388
      BCL9; B-cell lymphoma 9 protein
      cl26464
      Location:571 → 1161
      Atrophin-1; Atrophin-1 family

    2. XM_024989988.2 → XP_024845756.1  B-cell CLL/lymphoma 9 protein isoform X3

      UniProtKB/TrEMBL
      A0A3Q1M8P9
      Conserved Domains (2) summary
      pfam11502
      Location:276 → 314
      BCL9; B-cell lymphoma 9 protein
      cl26464
      Location:497 → 1087
      Atrophin-1; Atrophin-1 family

    3. XM_024989987.2 → XP_024845755.1  B-cell CLL/lymphoma 9 protein isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M8P9
      Related
      ENSBTAP00000064833.2, ENSBTAT00000080372.2
      Conserved Domains (2) summary
      pfam11502
      Location:349 → 387
      BCL9; B-cell lymphoma 9 protein
      cl26464
      Location:570 → 1160
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein Strain
    Heading Accession and Version

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