U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PFN1 profilin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 607397, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PFN1provided by VGNC
    Official Full Name
    profilin 1provided by VGNC
    Primary source
    VGNC:VGNC:53432
    See related
    Ensembl:ENSCAFG00845003501
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PFN1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (31772763..31775424)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (31807352..31810011)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (31875384..31878044)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (31739303..31741962)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (31699008..31701668)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 7 Neighboring gene enolase 3 Neighboring gene ring finger protein 167 Neighboring gene solute carrier family 25 member 11 Neighboring gene uncharacterized LOC119871838 Neighboring gene glycoprotein Ib platelet subunit alpha

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    profilin-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      31772763..31775424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038665270.1 → XP_038521198.1  profilin-1

      UniProtKB/TrEMBL
      A0A8C0KER4, A0A8C0PGH0, A0A8I3MSY8
      Related
      ENSCAFP00845004958.1, ENSCAFT00845006239.1
      Conserved Domains (1) summary
      smart00392
      Location:2 → 140
      PROF; Profilin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      31739303..31741962
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038475375.1 → XP_038331303.1  profilin-1

      Conserved Domains (1) summary
      smart00392
      Location:2 → 140
      PROF; Profilin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      31699008..31701668
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038600744.1 → XP_038456672.1  profilin-1

      Conserved Domains (1) summary
      smart00392
      Location:2 → 140
      PROF; Profilin

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      31875384..31878044
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038536550.1 → XP_038392478.1  profilin-1

      UniProtKB/TrEMBL
      A0A8C0KER4, A0A8C0PGH0, A0A8I3MSY8
      Conserved Domains (1) summary
      smart00392
      Location:2 → 140
      PROF; Profilin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      31807352..31810011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038514075.1 → XP_038370003.1  profilin-1

      UniProtKB/TrEMBL
      A0A8C0KER4, A0A8C0PGH0, A0A8I3MSY8
      Conserved Domains (1) summary
      smart00392
      Location:2 → 140
      PROF; Profilin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.