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    TVAGG3_1045110 SNAP receptor protein [ Trichomonas vaginalis G3 ]

    Gene ID: 5468953, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_1045110
    Gene description
    SNAP receptor protein
    Primary source
    TrichDB:TVAGG3_1045110
    Locus tag
    TVAGG3_1045110
    See related
    VEuPathDB:TVAGG3_1045110
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v1045110
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    Genomic context

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    See TVAGG3_1045110 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_067203.1 (24730782..24731836)

    Chromosome I - NC_067203.1Genomic Context describing neighboring genes Neighboring gene universal ribosomal protein uL13 family Neighboring gene armadillo (ARM) repeat-containing protein family Neighboring gene SH3 domain binding Neighboring gene ankyrin repeat domain-containing protein 49 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067203.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • replaces TrichDB:TVAG_070550

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SNAP receptor protein
    XP_001584378.1
    • eggNOG seed ortholog:5722.XP_001584378.1;replaces TrichDB:TVAG_070550

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067203.1 Reference assembly

      Range
      24730782..24731836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001584328.2 → XP_001584378.1  SNAP receptor protein [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001584378.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2D7V9
      Conserved Domains (3) summary
      cd15848
      Location:198 → 259
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins
      pfam00804
      Location:47 → 234
      Syntaxin; Syntaxin
      cl00143
      Location:45 → 182
      SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    Nucleotide Protein
    Heading Accession and Version

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