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    SLC44A1 solute carrier family 44 member 1 [ Bos taurus (cattle) ]

    Gene ID: 538887, updated on 6-Jun-2024

    Summary

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    Official Symbol
    SLC44A1provided by VGNC
    Official Full Name
    solute carrier family 44 member 1provided by VGNC
    Primary source
    VGNC:VGNC:56984
    See related
    BGD:BT30179; Ensembl:ENSBTAG00000007163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SLC44A1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (95034588..95266928)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL18-like Neighboring gene large ribosomal subunit protein uL18-like Neighboring gene uncharacterized LOC132346000 Neighboring gene fibronectin type III and SPRY domain containing 1 like Neighboring gene fukutin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables choline transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in choline transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    choline transporter-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      95034588..95266928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996304.2 → XP_024852072.1  choline transporter-like protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1M0P0, A0AAA9S7S9
      Related
      ENSBTAP00000079991.1, ENSBTAT00000112575.1
      Conserved Domains (1) summary
      pfam04515
      Location:293 → 603
      Choline_transpo; Plasma-membrane choline transporter

    2. XM_024996303.2 → XP_024852071.1  choline transporter-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAA9T4C9, A0AAA9TAB2
      Related
      ENSBTAP00000092913.1, ENSBTAT00000094498.1
      Conserved Domains (1) summary
      pfam04515
      Location:293 → 603
      Choline_transpo; Plasma-membrane choline transporter

    3. XM_059889516.1 → XP_059745499.1  choline transporter-like protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1M0P0
      Related
      ENSBTAP00000009435.7, ENSBTAT00000009435.7

    4. XM_024996305.2 → XP_024852073.1  choline transporter-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T4C9
      Conserved Domains (1) summary
      pfam04515
      Location:293 → 603
      Choline_transpo; Plasma-membrane choline transporter
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials