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    ARID2 AT-rich interaction domain 2 [ Bos taurus (cattle) ]

    Gene ID: 517876, updated on 6-Jun-2024

    Summary

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    Official Symbol
    ARID2provided by VGNC
    Official Full Name
    AT-rich interaction domain 2provided by VGNC
    Primary source
    VGNC:VGNC:26125
    See related
    Ensembl:ENSBTAG00000011087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ARID2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (34309327..34518006, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 1 Neighboring gene SR-related CTD associated factor 11 Neighboring gene uncharacterized LOC132345273 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene anoctamin 6 Neighboring gene transfer RNA arginine (anticodon ACG)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF superfamily-type complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-rich interactive domain-containing protein 2
    Names
    AT rich interactive domain 2 (ARID, RFX-like)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      34309327..34518006 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002687323.7 → XP_002687369.1  AT-rich interactive domain-containing protein 2

      See identical proteins and their annotated locations for XP_002687369.1

      UniProtKB/TrEMBL
      F1N463
      Related
      ENSBTAP00000014719.6, ENSBTAT00000014719.7
      Conserved Domains (2) summary
      pfam01388
      Location:19 → 101
      ARID; ARID/BRIGHT DNA binding domain
      pfam02257
      Location:521 → 601
      RFX_DNA_binding; RFX DNA-binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials