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    BLNK B cell linker [ Bos taurus (cattle) ]

    Gene ID: 510393, updated on 11-Apr-2024

    Summary

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    Official Symbol
    BLNKprovided by VGNC
    Official Full Name
    B cell linkerprovided by VGNC
    Primary source
    VGNC:VGNC:26506
    See related
    BGD:BT15254; Ensembl:ENSBTAG00000021358
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See BLNK in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (17515979..17607169, complement)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104975956 Neighboring gene zinc finger protein 518A Neighboring gene DNA nucleotidylexotransferase Neighboring gene oligodendrocytic myelin paranodal and inner loop protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC127870

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell linker protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046054.2 → NP_001039519.1  B-cell linker protein

      See identical proteins and their annotated locations for NP_001039519.1

      Status: PROVISIONAL

      Source sequence(s)
      BC105353
      UniProtKB/TrEMBL
      F1MDI4, Q2KJG7
      Related
      ENSBTAP00000051686.1, ENSBTAT00000056369.2
      Conserved Domains (1) summary
      cd09929
      Location:339 → 457
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17515979..17607169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005225502.5 → XP_005225559.1  B-cell linker protein isoform X3

      UniProtKB/TrEMBL
      F1MDI4
      Related
      ENSBTAP00000072046.2, ENSBTAT00000076556.2
      Conserved Domains (1) summary
      cd09929
      Location:315 → 433
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

    2. XM_005225501.5 → XP_005225558.1  B-cell linker protein isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M9A4, F1MDI4
      Conserved Domains (1) summary
      cd09929
      Location:336 → 454
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)

    3. XM_005225500.5 → XP_005225557.1  B-cell linker protein isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MXN3, F1MDI4
      Related
      ENSBTAP00000060547.1, ENSBTAT00000072550.2
      Conserved Domains (1) summary
      cd09929
      Location:360 → 478
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
    Nucleotide Protein Strain
    Heading Accession and Version

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