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    RPS4XP3 ribosomal protein S4X pseudogene 3 [ Homo sapiens (human) ]

    Gene ID: 128580, updated on 10-Oct-2023

    Summary

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    Official Symbol
    RPS4XP3provided by HGNC
    Official Full Name
    ribosomal protein S4X pseudogene 3provided by HGNC
    Primary source
    HGNC:HGNC:16251
    See related
    Ensembl:ENSG00000214541 AllianceGenome:HGNC:16251
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RPS4L; RPS4P3; RPS4XL; dJ843L14.2
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    Genomic context

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    See RPS4XP3 in Genome Data Viewer
    Location:
    20q13.31
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (56601648..56602114)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (58379165..58379631)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (55176704..55177170)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904971 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18143 Neighboring gene long intergenic non-protein coding RNA 1716 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:55159734-55160366 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:55170612-55171203 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:55171204-55171796 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr20:55181331-55182530 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:55199862-55200624 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:55202149-55202909 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13058 Neighboring gene Sharpr-MPRA regulatory region 3831 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:55211854-55212614 Neighboring gene transcription factor AP-2 gamma Neighboring gene RNA, U6 small nuclear 1146, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. lnc-Rps4l-encoded peptide RPS4XL regulates RPS6 phosphorylation and inhibits the proliferation of PASMCs caused by hypoxia. Li Y, et al. Mol Ther, 2021 Apr 7. PMID 33429084, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • peptide 40S ribosomal protein S4 X isoform-like
    • ribosomal protein S4 pseudogene 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_000967.4 

      Range
      101..567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      56601648..56602114
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      58379165..58379631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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