Protein Family Models for Protein (Select 1175823501) - Protein Family Models

Select item 3909621.

LysR substrate-binding domain-containing protein

The structure of this domain is known and is similar to the periplasmic binding proteins [1]. This domain binds a variety of ligands that caries in size and structure, such as amino acids, sugar phosphates, organic acids, metal cations, flavonoids, C6-ring carboxylic acids, H2O2, HOCl, homocysteine, NADPH, ATP, sulphate, muropeptides, acetate, salicylate, citrate, phenol- and quinolone derivatives, acetylserines, fatty acid CoA, shikimate, chorismate, homocysteine, indole-3-acetic acid, Na(I), c-di-GMP, ppGpp and hydrogen peroxide (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). [1]. 9309218. The structure of the cofactor-binding fragment of the LysR. family member, CysB: a familiar fold with a surprising subunit. arrangement.. Tyrrell R, Verschueren KH, Dodson EJ, Murshudov GN, Addy C,. Wilkinson AJ;. Structure 1997;5:1017-1032. (from Pfam)

Date:: 2024-04-03

Family Accession:: NF015431.4
Method:: HMM

Select item 3884912.

LysR family transcriptional regulator

GO Terms:

Molecular Function:: DNA-binding transcription factor activity (GO:0003700)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Date:: 2023-12-12

Family Accession:: NF012354.4
Method:: HMM

Select item 3500713.

new record, indexing in progress

Family Accession:

Select item 3470574.

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Family Accession:

Select item 3179485.

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Family Accession:

Select item 3159426.

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Family Accession:

Select item 776077.

LysR family transcriptional regulator

LysR family transcriptional regulator, similar to Escherichia coli PgrR/YcjZ a regulator of peptide glycan recycling, and to the putative LysR-type transcriptional regulator Escherichia coli YcaN

GO Terms:

Molecular Function:: DNA-binding transcription activator activity (GO:0001216)

Date:: 2022-07-20

Family Accession:: 10444115
Method:: Sparcle

Select item 376588.

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Family Accession:

Select item 375479.

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Family Accession:

Select item 1339110.

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Family Accession:

Select item 1277911.

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Family Accession:

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