Alignment last updated: 01/30/2014 22:05:30

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for BX248090.12 and CR392368.7

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BX248090.12 Zebrafish DNA sequence from clone DKEY-156K12 in linkage group 20, complete sequence [htgs_phase3]

Length: 197,908 bp

CR392368.7 Zebrafish DNA sequence from clone DKEY-86E18 in linkage group 20, complete sequence [htgs_phase3]

Length: 87,973 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 119341
Total Length: 2000
Aligned Length: 2000
Percent Identity: 100
Number of Gaps: 0
Number of Mismatches: 0
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
A	197908	85973	+	-	chenhc	Taxid 7955 chrom 20 Primary assembly	2014-01-30 22:05:30.296	114372	119341	GRCz11, GRCz10

Alignment 1 of 1

 BX248090.12 : + : 195909..197908
 CR392368.7 : - : 87973..85974
 Mismatches = 0, Gaps = 0, Length = 2000
 Percent identity = 100%
 Score = 3694 bits (2000), Expect = 0
  15 BAC and 11 Fosmid bridging clones.
  15 BAC and 11 Fosmid concordant clones.
  0 BAC and 0 Fosmid discordant clones.

BX248090.12 >195909  gcaggcctttcacaggctctggcctcaactgggttatgctccactttgataacatccctg 195968 
CR392368.7  <87973   ............................................................ 87914  

BX248090.12 >195969  gcttacaataagatcattctgcaggctgggctttgacagaaaacagcactctgactttgg 196028 
CR392368.7  <87913   ............................................................ 87854  

BX248090.12 >196029  ctacttcaagcggtttgatgtttttctctgtacaagggcacagtttactacaacactggg 196088 
CR392368.7  <87853   ............................................................ 87794  

BX248090.12 >196089  actttccacactgcaacccactaaaggcccagaggttttggatgctaggctagttctcac 196148 
CR392368.7  <87793   ............................................................ 87734  

BX248090.12 >196149  acacagaaacatcacatcacagtccattttcacctacacgaaggtgtaaaaacacacatg 196208 
CR392368.7  <87733   ............................................................ 87674  

BX248090.12 >196209  catgcaaacaagcaaacgcaacagagagatggctgggaaattcaattttgctttttaaat 196268 
CR392368.7  <87673   ............................................................ 87614  

BX248090.12 >196269  gtagtttcacttgtgaccctggatcacaaaatctgttttgaattcaaaactagtgtgggt 196328 
CR392368.7  <87613   ............................................................ 87554  

BX248090.12 >196329  ttattggtggggaaagccaaaaaagtcaaaactatatatatttacattttttaatttttt 196388 
CR392368.7  <87553   ............................................................ 87494  

BX248090.12 >196389  ttttacaaaatattcagaatattaacgtaacacttgttgtacaagccccctagagttaaa 196448 
CR392368.7  <87493   ............................................................ 87434  

BX248090.12 >196449  ccagatatttacattagatgttgcctacgatattgttgtttattggaaggaatgggtcaa 196508 
CR392368.7  <87433   ............................................................ 87374  

BX248090.12 >196509  tagagctgccattttggtacagggtagcgcccctttgaaatgaatgagggagcaaggtgc 196568 
CR392368.7  <87373   ............................................................ 87314  

BX248090.12 >196569  agtggaggactggccatccatatatatgatcaggagttttcccggtggtcagtatgcact 196628 
CR392368.7  <87313   ............................................................ 87254  

BX248090.12 >196629  tttttatatcgatggatctgttatcgcatgggtagggccagacggaatctgcggacgttt 196688 
CR392368.7  <87253   ............................................................ 87194  

BX248090.12 >196689  tttgctatttctgctgagaattttggtaaaaatctgcagatttctgtggaattattttgg 196748 
CR392368.7  <87193   ............................................................ 87134  

BX248090.12 >196749  gagcatcataactaaaacccaaatatatgaaataaaaaataatattattttaacttttat 196808 
CR392368.7  <87133   ............................................................ 87074  

BX248090.12 >196809  ttaatgtttaaaatgcaaatccatttagattcactttatttggtaaacgaagcaaagcat 196868 
CR392368.7  <87073   ............................................................ 87014  

BX248090.12 >196869  atacgtaatatctctactaaaaaatattgctttacaaactgcattgtacataaattagat 196928 
CR392368.7  <87013   ............................................................ 86954  

BX248090.12 >196929  gaacattttcacattaatcaataatattactgtaattaatttaaaaactaaataaatgat 196988 
CR392368.7  <86953   ............................................................ 86894  

BX248090.12 >196989  gggctaaaaatctgctgaaatcagtggtaaatctgcgaaattctgcgtgcgcagatttcg 197048 
CR392368.7  <86893   ............................................................ 86834  

BX248090.12 >197049  tgtgggcctacgcatgggcttgcatgggaagagcgtgtgtttgagtgcatggaaatgtat 197108 
CR392368.7  <86833   ............................................................ 86774  

BX248090.12 >197109  taaccatcctcccttgatctaatccatgtcctgaaacacacccccgctcttgctttcacg 197168 
CR392368.7  <86773   ............................................................ 86714  

BX248090.12 >197169  tttcattctaccggaggacacgattagtttgtgaatgaatttccattatgaacgactctc 197228 
CR392368.7  <86713   ............................................................ 86654  

BX248090.12 >197229  cattatgaatgactaaaaactcaactatttagtctccacttcacttcctaatctgcaatt 197288 
CR392368.7  <86653   ............................................................ 86594  

BX248090.12 >197289  tcctctctgaatatagcactaactgtgtttaaaaaaaaaaaaaaaaaaaaattactactg 197348 
CR392368.7  <86593   ............................................................ 86534  

BX248090.12 >197349  ctttccttcttagactttacagagctttggataaaagtgtctgctaaatgactaaatgta 197408 
CR392368.7  <86533   ............................................................ 86474  

BX248090.12 >197409  aatgactaaatgtgtgaaccatcaatacccctgtgtctcaacgtgtacctttctgatcta 197468 
CR392368.7  <86473   ............................................................ 86414  

BX248090.12 >197469  aatggtataacatttgtagtattcactaatttatggtggacagtatgcacactgaggcac 197528 
CR392368.7  <86413   ............................................................ 86354  

BX248090.12 >197529  aggcactgttatgttgtcaggcactcttataagttacttcaaaaactagccgttgcttca 197588 
CR392368.7  <86353   ............................................................ 86294  

BX248090.12 >197589  cttagccgacaataatacaagtttctggcactgcagcatcttggagatatttcatttaca 197648 
CR392368.7  <86293   ............................................................ 86234  

BX248090.12 >197649  ttgttttcttaatttatttaccaaaactagcataagcctatagaatttagtgcaagttgg 197708 
CR392368.7  <86233   ............................................................ 86174  

BX248090.12 >197709  ttctactttgccttatggtcgctatgcgatatgtatatatttatagagttaaacagctga 197768 
CR392368.7  <86173   ............................................................ 86114  

BX248090.12 >197769  gttatatctttttgcatacatttagcagatttctgttgggtgggagcttctttagcttag 197828 
CR392368.7  <86113   ............................................................ 86054  

BX248090.12 >197829  cctagcataaatcattgaatcggattagaccattagcacctcgttcaaaaagagctttga 197888 
CR392368.7  <86053   ............................................................ 85994  

BX248090.12 >197889  taattttcttattaaagctt 197908 
CR392368.7  <85993   .................... 85974

Events

Type

Date

Whodid

Comment

298443

InitHasAlign

01/30/2014 22:03:24

cgi_chen

find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Jan 16 2014. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 576938310
Info: Running Blast Filter: 
Info: CBlastAligner found 1 hits.
Info: Determined ID: gi|576938310 needs Merging.
Info: Merged into 0 alignments.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|576938310 needs Merging.
Info: Merged into 0 alignments.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|576938310 needs Merging.
Info: Merged into 0 alignments.
Info: Best Rank: 0 in  for 576938310 of 1
Info:  NG returned 1 alignments

f_cron_job

298510

CreateSwitchPt

01/30/2014 22:05:30

chenhc

tpf_m_BuilderId: t Toolkit wrapper version: built Dec 11 2013 using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH211-107M3	BX248090.12	99.62%	pos 125016 (R+)	BX248090.12	100%	pos 144829 (F-)
CH211-114C2				BX248090.12	100%	pos 100861 (F-)
CH211-114J23	BX248090.12	100%	pos 148505 (R+)
CH211-120A10	BX248090.12	100%	pos 174356 (R-)	BX248090.12	100%	pos 123 (F+)
CH211-122O4	BX248090.12	100%	pos 66391 (R+)
CH211-127B20	BX248090.12	100%	pos 120549 (R-)
CH211-13L18				BX248090.12	99.5%	pos 120878 (F-)
CH211-160I21	CR392368.7	100%	pos 7118 (R-)
CH211-170M23				CR392368.7	99.26%	pos 16817 (F-)
CH211-172H10	BX248090.12	99.77%	pos 120866 (R-)
CH211-172N10				BX248090.12	99.86%	pos 139517 (F+)
CH211-178C3				BX248090.12	99.84%	pos 12795 (F-)
CH211-1G11				BX248090.12	99.6%	pos 125038 (F+)
CH211-203M1				BX248090.12	100%	pos 65661 (F-)
CH211-210I13				CR392368.7	98.72%	pos 12131 (F-)
CH211-23H20				BX248090.12	100%	pos 67545 (F-)
CH211-247P24				BX248090.12	100%	pos 118733 (F-)
CH211-253P1	BX248090.12	100%	pos 14018 (R+)	BX248090.12	98.97%	pos 174679 (F-)
CH211-258G15				CR392368.7	100%	pos 48862 (F-)
CH211-278M24	BX248090.12	100%	pos 120716 (R-)
CH211-51E7	BX248090.12	99.68%	pos 17711 (R+)	BX248090.12	100%	pos 192960 (F-)
CH211-5O7				CR392368.7	99.83%	pos 11795 (F-)
CH211-71N3				BX248090.12	100%	pos 12956 (F-)
CH211-78B23	BX248090.12	100%	pos 31441 (R-)
CH211-80A13	BX248090.12	99.68%	pos 138892 (R-)
CH211-87K17	BX248090.12	100%	pos 12669 (R-)
CH211-8A15				CR392368.7	99.66%	pos 56632 (F+)
CH211-97H7				BX248090.12	99.31%	pos 145150 (F-)
CH211-97H7				BX248090.12	99.65%	pos 145059 (F-)
CH73-100P2				BX248090.12	97.16%	pos 30559 (F+)
CH73-141L7	BX248090.12	97.91%	pos 188154 (R+)
CH73-141O9	CR392368.7	98.69%	pos 24721 (R-)
CH73-165I2				BX248090.12	100%	pos 145498 (F+)
CH73-176J6	CR392368.7	98.36%	pos 34997 (R+)	BX248090.12	99.72%	pos 148633 (F+)
CH73-182F19	CR392368.7	98.23%	pos 34987 (R+)	BX248090.12	99.75%	pos 148584 (F+)
CH73-183F19	CR392368.7	98.39%	pos 34947 (R+)	BX248090.12	99.88%	pos 148584 (F+)
CH73-192I19	CR392368.7	98.12%	pos 24721 (R-)
CH73-192J9				BX248090.12	97.88%	pos 232 (F+)
CH73-201H14	BX248090.12	98.53%	pos 187162 (R-)
CH73-203L20	BX248090.12	98.83%	pos 137296 (R+)
CH73-224J18	CR392368.7	97.69%	pos 47872 (R+)	BX248090.12	99.23%	pos 145458 (F+)
CH73-26D19				BX248090.12	99.32%	pos 125132 (F+)
CH73-271A12	BX248090.12	99.32%	pos 153194 (R+)	CR392368.7	97.66%	pos 47872 (F+)
CH73-273L17	BX248090.12	98.31%	pos 138933 (R-)	BX248090.12	98.08%	pos 41915 (F+)
CH73-28B20				BX248090.12	97.38%	pos 118945 (F+)
CH73-2L8	BX248090.12	97.11%	pos 121422 (R+)	CR392368.7	97.6%	pos 34955 (F+)
CH73-306G9	BX248090.12	98.15%	pos 54794 (R-)
CH73-310L22	BX248090.12	98.84%	pos 42760 (R+)	BX248090.12	100%	pos 147705 (F-)
CH73-320J23	BX248090.12	97.93%	pos 120462 (R-)
CH73-369G20	BX248090.12	99.82%	pos 153199 (R+)
CH73-39J23	BX248090.12	99.16%	pos 125130 (R+)	CR392368.7	98.19%	pos 34947 (F+)
CH73-40M9	BX248090.12	98.7%	pos 193730 (R+)
CH73-52O23				BX248090.12	97.27%	pos 118943 (F+)
CH73-67D12	CR392368.7	98.47%	pos 34947 (R+)	BX248090.12	99.6%	pos 153243 (F+)
CH73-71H20	BX248090.12	99.64%	pos 145833 (R+)
CH73-89K10	BX248090.12	97.71%	pos 41915 (R+)
DKEY-112N14	CR392368.7	99.82%	pos 2676 (R-)
DKEY-124G8	CR392368.7	100%	pos 60213 (R+)	BX248090.12	100%	pos 38483 (F+)
DKEY-149J11				BX248090.12	100%	pos 61727 (F-)
DKEY-156K12	BX248090.12	100%	pos 197380 (R-)
DKEY-156K12	CR392368.7	100%	pos 86001 (R+)
DKEY-175L2	BX248090.12	100%	pos 195340 (R-)
DKEY-190M8	CR392368.7	100%	pos 1226 (R+)	BX248090.12	100%	pos 74008 (F+)
DKEY-199L18	BX248090.12	100%	pos 126046 (R-)
DKEY-204A8	CR392368.7	100%	pos 60215 (R+)
DKEY-224P18				BX248090.12	100%	pos 129637 (F-)
DKEY-226O13	BX248090.12	100%	pos 62491 (R+)
DKEY-231I24	CR392368.7	100%	pos 1221 (R+)
DKEY-238N15	BX248090.12	99.86%	pos 62379 (R+)	CR392368.7	100%	pos 54003 (F+)
DKEY-242M11				BX248090.12	100%	pos 115020 (F-)
DKEY-244E22	CR392368.7	100%	pos 30 (R+)	BX248090.12	100%	pos 101015 (F+)
DKEY-245N9	BX248090.12	100%	pos 9920 (R+)	BX248090.12	99.86%	pos 173440 (F-)
DKEY-261M17	BX248090.12	100%	pos 37633 (R-)
DKEY-272M9				CR392368.7	100%	pos 35970 (F-)
DKEY-275A12	CR392368.7	100%	pos 71502 (R+)
DKEY-57E9	BX248090.12	100%	pos 174585 (R-)
DKEY-64B24	CR392368.7	100%	pos 68676 (R-)
DKEY-84C18	CR392368.7	100%	pos 19825 (R-)
DKEY-86E18	CR392368.7	100%	pos 30 (R+)	BX248090.12	100%	pos 127642 (F+)
DKEY-87J9	BX248090.12	100%	pos 148053 (R-)
DKEY-97O15	BX248090.12	100%	pos 37573 (R-)
DKEYP-12G23	BX248090.12	100%	pos 126729 (R+)
DKEYP-14D2	BX248090.12	100%	pos 189508 (R-)
DKEYP-1F5				CR392368.7	100%	pos 84852 (F+)
DKEYP-25P1	BX248090.12	100%	pos 172620 (R+)
DKEYP-36I17				BX248090.12	100%	pos 37981 (F-)
DKEYP-3O10				BX248090.12	99.8%	pos 43255 (F+)
DKEYP-49D1				BX248090.12	100%	pos 129611 (F-)
DKEYP-75G2	BX248090.12	99.8%	pos 64550 (R-)
RP71-30A19	BX248090.12	100%	pos 125023 (R+)	CR392368.7	100%	pos 17268 (F+)
RP71-30C11	BX248090.12	100%	pos 125023 (R+)	CR392368.7	99.83%	pos 17254 (F+)
RP71-85E18				BX248090.12	100%	pos 31089 (F-)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH1073-129J7	BX248090.12	98.34%	pos 26947 (R+)	BX248090.12	97.83%	pos 58496 (F-)
CH1073-140E2	BX248090.12	98.59%	pos 50347 (R+)	BX248090.12	98.87%	pos 81453 (F-)
CH1073-147P7	BX248090.12	99.43%	pos 43082 (R-)	BX248090.12	98.92%	pos 12374 (F+)
CH1073-185L21				BX248090.12	99.12%	pos 74071 (F+)
CH1073-194L7				BX248090.12	98.85%	pos 8256 (F-)
CH1073-198D15				CR392368.7	99.67%	pos 57509 (F-)
CH1073-210J4				BX248090.12	99.11%	pos 49285 (F+)
CH1073-237I11				CR392368.7	99.22%	pos 57246 (F-)
CH1073-239J9	BX248090.12	98.19%	pos 110880 (R-)	BX248090.12	98.89%	pos 77916 (F+)
CH1073-243B6	BX248090.12	98.37%	pos 179252 (R+)	CR392368.7	97.6%	pos 70447 (F+)
CH1073-247A3	BX248090.12	99.16%	pos 179700 (R+)
CH1073-257C10				BX248090.12	99.11%	pos 105797 (F+)
CH1073-257C12	BX248090.12	100%	pos 145123 (R-)
CH1073-267B10				CR392368.7	98.2%	pos 38051 (F-)
CH1073-310F6				CR392368.7	98.44%	pos 38111 (F+)
CH1073-31F13	BX248090.12	99.34%	pos 192846 (R+)	CR392368.7	98.73%	pos 60960 (F+)
CH1073-320J15	BX248090.12	98.51%	pos 183203 (R+)	CR392368.7	100%	pos 63346 (F+)
CH1073-326D3	BX248090.12	97.12%	pos 108421 (R+)	BX248090.12	97.84%	pos 140367 (F-)
CH1073-328G18	CR392368.7	100%	pos 25836 (R+)
CH1073-328G18	CR392368.7	100%	pos 25853 (R+)
CH1073-347C12	BX248090.12	99.11%	pos 83629 (R+)
CH1073-372A1				CR392368.7	97.06%	pos 25024 (F+)
CH1073-383F6	BX248090.12	100%	pos 151719 (R-)	BX248090.12	97.3%	pos 117037 (F+)
CH1073-404K18	BX248090.12	98.19%	pos 165278 (R-)
CH1073-423P5				BX248090.12	98.1%	pos 111037 (F-)
CH1073-429H1	BX248090.12	97.38%	pos 44732 (R+)
CH1073-429H2	BX248090.12	97.23%	pos 44732 (R+)
CH1073-436H18				BX248090.12	99.09%	pos 89422 (F-)
CH1073-441C23	BX248090.12	97.52%	pos 59597 (R+)
CH1073-446I10				BX248090.12	99.51%	pos 89422 (F-)
CH1073-448I23				CR392368.7	98.48%	pos 38808 (F-)
CH1073-463I2	BX248090.12	98.67%	pos 170720 (R+)	CR392368.7	97.84%	pos 71538 (F+)
CH1073-474B1	BX248090.12	98.03%	pos 44683 (R+)
CH1073-497H11	BX248090.12	97.29%	pos 197464 (R+)	CR392368.7	99.16%	pos 60075 (F+)
CH1073-505D13	CR392368.7	98.5%	pos 24721 (R-)
CH1073-520D6	CR392368.7	98.48%	pos 24729 (R-)
CH1073-530F6	BX248090.12	99.24%	pos 129173 (R-)
CH1073-530H6	CR392368.7	98.81%	pos 50890 (R+)	CR392368.7	98.02%	pos 83700 (F-)
CH1073-547H3	BX248090.12	97.85%	pos 95540 (R-)
CH1073-549D11				BX248090.12	98.52%	pos 108054 (F-)
CH1073-551M19	BX248090.12	99.56%	pos 183582 (R-)	BX248090.12	98.44%	pos 154468 (F+)
CH1073-553F3				BX248090.12	99.19%	pos 32692 (F-)
CH1073-553M9				CR392368.7	99.68%	pos 57610 (F-)
CH1073-558A11				BX248090.12	99.15%	pos 62951 (F+)
CH1073-561N6	BX248090.12	98.63%	pos 31419 (R-)
CH1073-577N16	BX248090.12	99.5%	pos 191482 (R-)	BX248090.12	97.84%	pos 162273 (F+)
CH1073-579H3	BX248090.12	98.81%	pos 31949 (R-)
CH1073-580E10	BX248090.12	98.83%	pos 22802 (R+)
CH1073-580F10	BX248090.12	98.66%	pos 22946 (R+)
CH1073-60F24	BX248090.12	98.54%	pos 77259 (R-)
CH1073-642I4				CR392368.7	97.9%	pos 71607 (F+)
CH1073-654M24				BX248090.12	100%	pos 178175 (F+)
CH1073-674E15	CR392368.7	98.55%	pos 81960 (R+)	BX248090.12	100%	pos 177933 (F+)
CH1073-674P8	BX248090.12	97.97%	pos 76109 (R-)	BX248090.12	97.72%	pos 43780 (F+)
CH1073-694J1				BX248090.12	99.27%	pos 73808 (F+)
CH1073-69L8	CR392368.7	97.85%	pos 36834 (R+)	CR392368.7	98.14%	pos 37012 (F+)
CH1073-6M12	BX248090.12	97.36%	pos 121352 (R-)	BX248090.12	97.04%	pos 121276 (F-)
CH1073-705G7	BX248090.12	99.02%	pos 153353 (R-)
CH1073-706E1				BX248090.12	100%	pos 149289 (F+)
CH1073-71C6	CR392368.7	98.82%	pos 79277 (R+)	CR392368.7	98.97%	pos 79181 (F+)
CH1073-71C6	BX248090.12	99.19%	pos 169260 (R+)
CH1073-742C18	BX248090.12	98.88%	pos 54988 (R-)
CH1073-751D19	BX248090.12	98.42%	pos 27770 (R+)
CH1073-761H8				CR392368.7	99.11%	pos 66255 (F-)
CH1073-775G17	BX248090.12	98.79%	pos 193306 (R+)	CR392368.7	99.58%	pos 62079 (F+)
CH1073-782N2	BX248090.12	97.08%	pos 163797 (R+)	CR392368.7	97.24%	pos 87027 (F+)
CH1073-782N2				BX248090.12	97.24%	pos 196202 (F-)
CH1073-821H24				CR392368.7	99.03%	pos 46466 (F+)
CH1073-836L3				BX248090.12	98.49%	pos 49762 (F-)
CH1073-855J7	BX248090.12	98.46%	pos 79184 (R-)	BX248090.12	99.07%	pos 49203 (F+)
CH1073-901I4	CR392368.7	98.09%	pos 56136 (R-)
CH1073-909B9	BX248090.12	98.15%	pos 79304 (R-)
CH1073-909C10	BX248090.12	97.46%	pos 62234 (R-)
CH1073-935M20	BX248090.12	97.3%	pos 92453 (R-)
CH1073-939L2				CR392368.7	98.64%	pos 24205 (F+)
CH1073-946H23				BX248090.12	98.56%	pos 49991 (F+)
CH1073-946H23				BX248090.12	98.54%	pos 49991 (F+)
CH1073-94G20				BX248090.12	97.51%	pos 99405 (F+)
CH1073-95K3	BX248090.12	97.02%	pos 163094 (R+)
ZFOS-114A2				CR392368.7	100%	pos 28418 (F-)
ZFOS-1364H3				CR392368.7	99.14%	pos 37309 (F-)
ZFOS-1400B8	BX248090.12	98.26%	pos 47288 (R-)
ZFOS-1408G1	CR392368.7	100%	pos 63572 (R-)
ZFOS-1458A2	CR392368.7	100%	pos 18313 (R-)
ZFOS-1474A7	BX248090.12	98.76%	pos 62884 (R-)
ZFOS-1607H1	BX248090.12	99.68%	pos 38587 (R-)
ZFOS-1680F7				BX248090.12	98.16%	pos 131753 (F-)
ZFOS-184F12	CR392368.7	100%	pos 70228 (R+)	BX248090.12	99.85%	pos 174374 (F+)
ZFOS-2497G9	BX248090.12	100%	pos 21169 (R+)	BX248090.12	99.51%	pos 63972 (F-)
ZFOS-2500G4	BX248090.12	99.87%	pos 36102 (R+)	BX248090.12	99.81%	pos 72255 (F-)
ZFOS-2622B7	BX248090.12	100%	pos 144730 (R-)
ZFOS-2701A9	BX248090.12	100%	pos 59658 (R-)	BX248090.12	100%	pos 20302 (F+)
ZFOS-2804B7	BX248090.12	100%	pos 133793 (R+)	BX248090.12	100%	pos 173912 (F-)
ZFOS-287A1				BX248090.12	100%	pos 22130 (F-)
ZFOS-2946D3	BX248090.12	100%	pos 186210 (R+)
ZFOS-339E6	BX248090.12	100%	pos 62182 (R-)	BX248090.12	100%	pos 25483 (F+)
ZFOS-391E11	BX248090.12	99.3%	pos 170180 (R-)	BX248090.12	98.16%	pos 131666 (F+)
ZFOS-470G5				BX248090.12	97.54%	pos 44607 (F+)
ZFOS-621A2	BX248090.12	99.01%	pos 134282 (R-)
ZFOS-635B3	BX248090.12	99.18%	pos 22692 (R-)
ZFOS-780G7	BX248090.12	98.14%	pos 131645 (R-)
ZFOS-786C2				BX248090.12	98.4%	pos 133639 (F-)
ZFOS-863H8	BX248090.12	99.69%	pos 132840 (R-)
ZFOS-867F4	BX248090.12	99.82%	pos 132987 (R-)
ZFOS-91D12	BX248090.12	98.92%	pos 156420 (R+)	BX248090.12	98.66%	pos 195908 (F-)
ZFOS-99G4	CR392368.7	99.8%	pos 65734 (R+)	BX248090.12	99.64%	pos 178828 (F+)

Repeats

Too repeats, not showing repeat table.

Join Legend

Curator Links

Alignment for BX248090.12 and CR392368.7

Alignment Summary

Alignment 1 of 1