Alignment last updated: 01/15/2014 17:53:44

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for AC210612.5 and AC208412.4

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AC210612.5 Zea mays chromosome 1 clone CH201-539P4, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces [htgs_limited_order]

Length: 194,542 bp

AC208412.4 Zea mays chromosome 1 clone CH201-172J4, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces [htgs_limited_order]

Length: 175,580 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 118214
Total Length: 15167
Aligned Length: 15167
Percent Identity: 99.9934
Number of Gaps: 0
Number of Mismatches: 1
Source: CtgOverlap Seq-Align

Alignment 1 of 1

 AC210612.5 : + : 179376..194542
 AC208412.4 : + : 1..15167
 Mismatches = 1, Gaps = 0, Length = 15167
 Percent identity = 99.99%
 Score = 2.8e+04 bits (15164), Expect = 0
  7 BAC and 1 Fosmid bridging clones.
  0 BAC and 0 Fosmid concordant clones.
  7 BAC and 1 Fosmid discordant clones.

AC210612.5 >179376  atgcttcctttgcaatttgtagaaaggatagaaaggtgattgctaggaagttaggggcaa 179435 
AC208412.4 >1       ............................................................ 60     

AC210612.5 >179436  aatgcaagggtgataaaacttgcatttgggttcctaagacaattgtgactaaccttgtag 179495 
AC208412.4 >61      ............................................................ 120    

AC210612.5 >179496  gacccaacaagagttgggtacctaagtcccaagcctaaatttgccttgcaggtttatgca 179555 
AC208412.4 >121     ............................................................ 180    

AC210612.5 >179556  tccgggggttaaagctggattatcgacagcggatgcacaaaccatatgacgggggagaag 179615 
AC208412.4 >181     ............................................................ 240    

AC210612.5 >179616  aagatgttcacctcctacgtcaagaataaggattcccaagactcaattatattcggtgat 179675 
AC208412.4 >241     ............................................................ 300    

AC210612.5 >179676  gggaatcaaggcaaggtcaaagggttaggtaaaattgcaatttctaatgagcattctatc 179735 
AC208412.4 >301     ............................................................ 360    

AC210612.5 >179736  tctaatgtatttttagtagagagtcttggatataatttgctatctgttagtcaattatgt 179795 
AC208412.4 >361     ............................................................ 420    

AC210612.5 >179796  catatgggatataactgtctatttacaaatgtagatgtatctgtctttagaagaagtaat 179855 
AC208412.4 >421     ............................................................ 480    

AC210612.5 >179856  ggttcactagcttttaagggtgtattagacggcaaactttatttagttgattttgcaaaa 179915 
AC208412.4 >481     ............................................................ 540    

AC210612.5 >179916  gaagaggccggtctagatgcatgcttaatagctaagactagcatgggctggctgtggcat 179975 
AC208412.4 >541     ............................................................ 600    

AC210612.5 >179976  cgccgcttagcacatgtggggatgaagaaccttcacaagcttctaaagggagaacatgtg 180035 
AC208412.4 >601     ............................................................ 660    

AC210612.5 >180036  ataggtttaactaacgtgcatttcgaaaaagatagaccttgtgcagcttgtcaagcaggt 180095 
AC208412.4 >661     ............................................................ 720    

AC210612.5 >180096  aaacaagtgggaggagcacatcacaacaagaatgtgatgaccacttcaagacccctggag 180155 
AC208412.4 >721     ............................................................ 780    

AC210612.5 >180156  ctgctgcatatggacctcttcggacctgtcgcctatctgagcataggagggagtaagtat 180215 
AC208412.4 >781     ............................................................ 840    

AC210612.5 >180216  ggtctagttattgttgatgacttttcccgcttcacttgggtgttctttttgcaggataag 180275 
AC208412.4 >841     ............................................................ 900    

AC210612.5 >180276  tctgaaacccaagggaccctcaagcgcttcctcaggagagctcaaaatgagtttgagctc 180335 
AC208412.4 >901     ............................................................ 960    

AC210612.5 >180336  aaggtgaagaagataaggagcgacaacgggtccgaattcaagaatcttcaagtggaggag 180395 
AC208412.4 >961     ............................................................ 1020   

AC210612.5 >180396  ttccttgaggaggaagggatcaagcacgagttctccgctccctacacaccacagcaaaat 180455 
AC208412.4 >1021    ............................................................ 1080   

AC210612.5 >180456  ggtgtggtagagaggaagaacaggacgctaatcgatatggcgagaacaatgcttggagaa 180515 
AC208412.4 >1081    ............................................................ 1140   

AC210612.5 >180516  ttcaagacccccgagtgtttttggtcggaagccgtgaacacggcttgccacgccatcaac 180575 
AC208412.4 >1141    ............................................................ 1200   

AC210612.5 >180576  agggtctaccttcatcgcctcctcaagaagacttcgtatgagctactaaccggtaacaaa 180635 
AC208412.4 >1201    ............................................................ 1260   

AC210612.5 >180636  cccaatgtatcttactttcgtgtatttgggagcaagtgctacattctagtgaagaaaggt 180695 
AC208412.4 >1261    ............................................................ 1320   

AC210612.5 >180696  agaaattctaagtttgctcccaaagctgtagaagggtttttgttaggttatgactcaaat 180755 
AC208412.4 >1321    ............................................................ 1380   

AC210612.5 >180756  acaaaggcgtatagagtcttcaacaaatcatcgggtttggttgaagtctctagcgacgtt 180815 
AC208412.4 >1381    ............................................................ 1440   

AC210612.5 >180816  gtatttgatgagactaatggctctccaagagagcaagttgttgattgtgatgatgtagat 180875 
AC208412.4 >1441    ............................................................ 1500   

AC210612.5 >180876  gaagaagatgttccgacggccgctatacgaaccatggcgattggagaagtgcggccacag 180935 
AC208412.4 >1501    ............................................................ 1560   

AC210612.5 >180936  gaacaagatgaacgagatcaaccttcttcctcaactatggtgcatcccccaaccgaagat 180995 
AC208412.4 >1561    ............................................................ 1620   

AC210612.5 >180996  gacgaacaggtacctcaagtggaggcgcttgatcaagggggagcacaagatgatcaagtg 181055 
AC208412.4 >1621    ............................................................ 1680   

AC210612.5 >181056  atggaggaagaagcgcaaccggcacctccaacccaagttcgagcgatgattcaaagggat 181115 
AC208412.4 >1681    ............................................................ 1740   

AC210612.5 >181116  catcccgtcgaccaaattctgggtgacattagcaagggagtaactactcgatctcgatta 181175 
AC208412.4 >1741    ............................................................ 1800   

AC210612.5 >181176  gttaatttttgtgagcattactcctttgtctcttctattgagcctttcagggtagaggag 181235 
AC208412.4 >1801    ............................................................ 1860   

AC210612.5 >181236  gccttggtagatccggactgggtgttggccatgcaggaggagctcaacaacttcaagcgc 181295 
AC208412.4 >1861    ............................................................ 1920   

AC210612.5 >181296  aatgaagtttggacactggtgcctcgtccgaagcaaaatgttgtgggaaccaagtgggtg 181355 
AC208412.4 >1921    ............................................................ 1980   

AC210612.5 >181356  ttccgcaacaaacaggacgagcatggggtggtgacgaggaacaaggctcgacttgtggca 181415 
AC208412.4 >1981    ............................................................ 2040   

AC210612.5 >181416  aaaggttatgcccaagtcgcaggtttggactttgaggagacatttgctcctgtggctagg 181475 
AC208412.4 >2041    ............................................................ 2100   

AC210612.5 >181476  ctagaatcaattcgtatcttgctagcatatgccgctcaccattctttcaggttgcaccaa 181535 
AC208412.4 >2101    ............................................................ 2160   

AC210612.5 >181536  atggatgtgaagagcgctttcctcaacgggccaatcaaggaggaggtgtacgtggagcaa 181595 
AC208412.4 >2161    ............................................................ 2220   

AC210612.5 >181596  ccccctggcttcgaggatgaacggtaccccgaccacgtgtgtaagctctctaaggcgctc 181655 
AC208412.4 >2221    ............................................................ 2280   

AC210612.5 >181656  tatggacttaagcaagccccaagagcatggtatgaatgccttagagactttttaattgct 181715 
AC208412.4 >2281    ............................................................ 2340   

AC210612.5 >181716  aatgctttcaaggttgggaaagccgatccaactctttttacaaagacatgtgatggtgac 181775 
AC208412.4 >2341    ............................................................ 2400   

AC210612.5 >181776  ttgtttgtgtgccaaatttatgtcgatgacataatatttggttctactaaccaaaagtct 181835 
AC208412.4 >2401    ............................................................ 2460   

AC210612.5 >181836  tgtgaagagtttagcagggtgatgacgcagaagttcgagatgtcgatgatgggcgagttg 181895 
AC208412.4 >2461    ............................................................ 2520   

AC210612.5 >181896  aactacttccttgggttccaagtgaagcaactcaaggacggcaccttcatctcccaaaca 181955 
AC208412.4 >2521    ............................................................ 2580   

AC210612.5 >181956  aagtacacgcaagatctgctaaagcggtttgggatgaaggacgccaaaacgcaaagactc 182015 
AC208412.4 >2581    ............................................................ 2640   

AC210612.5 >182016  cgatggggaccgacggacacaccgacctcaacaaaggaggtaagtccgtggatcaaaaag 182075 
AC208412.4 >2641    ............................................................ 2700   

AC210612.5 >182076  cataccggtcaatgataggttctttgctttacttatgtgctagtagaccggatattatgc 182135 
AC208412.4 >2701    ............................................................ 2760   

AC210612.5 >182136  ttagcgtatgcatgtgtgctagatttcaatccgatcctaaggagtgtcacttagtggcgg 182195 
AC208412.4 >2761    ............................................................ 2820   

AC210612.5 >182196  tgaagcgaattcttagatatttggttgctacgccttgcttcgggctctggtatccaaagg 182255 
AC208412.4 >2821    ............................................................ 2880   

AC210612.5 >182256  ggtctacctttgacttagttggatactcagactccgactatgctggatgtaaggtcgata 182315 
AC208412.4 >2881    ............................................................ 2940   

AC210612.5 >182316  ggaagagtacatcggggacgtgccaattcttaggaaggtccctggtgtcatggaactcta 182375 
AC208412.4 >2941    ............................................................ 3000   

AC210612.5 >182376  agaaacaaacctccgttgccctatccaccgctgaggccgagtatgttgccgcaggtcagt 182435 
AC208412.4 >3001    ............................................................ 3060   

AC210612.5 >182436  gttgcgcgcaacttctttggatgaggcaaaccctctgggactttggctacaatctgagca 182495 
AC208412.4 >3061    ............................................................ 3120   

AC210612.5 >182496  aagtcccactcctatgtgataatgagagtgctatccgcatggcggagaatcctgttgagc 182555 
AC208412.4 >3121    ............................................................ 3180   

AC210612.5 >182556  acagccgcacaaagcacatagacatccggcatcactttttgagagaccaccagcaaaagg 182615 
AC208412.4 >3181    ............................................................ 3240   

AC210612.5 >182616  gagatatcgaagtgtttcatgttagcaccgagaaccagctagccgatatcttcactaagc 182675 
AC208412.4 >3241    ............................................................ 3300   

AC210612.5 >182676  ctctagatgagaagaccttttgcaggttgcgtagtgagctaaatgtcttagattcgcgga 182735 
AC208412.4 >3301    ............................................................ 3360   

AC210612.5 >182736  acctggattgaattgtagcatacatgtatttatgcttttgatcatgttcctttttgcatt 182795 
AC208412.4 >3361    ............................................................ 3420   

AC210612.5 >182796  ttgttgcttattatggtgctcaagttgtacaaacactccctggacctcacaagtccgttg 182855 
AC208412.4 >3421    ............................................................ 3480   

AC210612.5 >182856  caaagtgatgcacatgtttagggggagatgtgttacaacttgaccctttgagactaacca 182915 
AC208412.4 >3481    ............................................................ 3540   

AC210612.5 >182916  tgtgcttgagtttgatgatttagtctcgaaggaggattgaaagggaaaaggtggacttgg 182975 
AC208412.4 >3541    ............................................................ 3600   

AC210612.5 >182976  accatgaaagacttccactacactccgatgagagggtaacttattccaagttcatcttta 183035 
AC208412.4 >3601    ............................................................ 3660   

AC210612.5 >183036  gactcttattgcctttgtgttctcatttgaagattttggtaaggcaatggggttaaaagg 183095 
AC208412.4 >3661    ............................................................ 3720   

AC210612.5 >183096  gccaagattgatcccgttttggtgcttgatgccaaagggggagaaaataaaggccaaagc 183155 
AC208412.4 >3721    ............................................................ 3780   

AC210612.5 >183156  gataaatggatcagctaccacttgagagattttgaaaatagtagaatagagtttttgttt 183215 
AC208412.4 >3781    ............................................................ 3840   

AC210612.5 >183216  tgttaaactcttttattgtctcttattgtctctcttgtcaatagttggcttcttgtgggg 183275 
AC208412.4 >3841    ............................................................ 3900   

AC210612.5 >183276  agaagtgttgattatgggaaatagggggagtttttgaaatctttgatcaatctcttttgg 183335 
AC208412.4 >3901    ............................................................ 3960   

AC210612.5 >183336  aatgactctctttatgcttcaacatgtgtgtttgacttagagatagagatttgagtttga 183395 
AC208412.4 >3961    ............................................................ 4020   

AC210612.5 >183396  tttgcaaaaacaaaccaagtggtggcaaaggatgatccatatatgccaaaattgaatcag 183455 
AC208412.4 >4021    ............................................................ 4080   

AC210612.5 >183456  aatcaatttgagttttatttgaagtgattttgcacttgttctagttgctttatgttgtgt 183515 
AC208412.4 >4081    ............................................................ 4140   

AC210612.5 >183516  tggcataaatcaccaaaaagggggagattgaaagggaaatgtgcccttgggccatttcta 183575 
AC208412.4 >4141    ............................................................ 4200   

AC210612.5 >183576  agtattttggtgattgagtgtcaacacaagtgtttaaatgtgaatctatgcccatgggtg 183635 
AC208412.4 >4201    ............................................................ 4260   

AC210612.5 >183636  aacaaagtgcaaatcaagagcaaaggtatgtttctaagtcttagtacattggttttgtgt 183695 
AC208412.4 >4261    ............................................................ 4320   

AC210612.5 >183696  actaatatatttgtctaagtgttagaaacagaaagaagaagaaaagagaagagttggctg 183755 
AC208412.4 >4321    ............................................................ 4380   

AC210612.5 >183756  tgtacagccaaaaggctggttcggtctggggcaccggactgtccggtggtgcaccggaca 183815 
AC208412.4 >4381    ............................................................ 4440   

AC210612.5 >183816  gtgtctcgtggtgcaccggacagtgtccggtgcgccaggttgcctcgagcgaagtggccg 183875 
AC208412.4 >4441    ............................................................ 4500   

AC210612.5 >183876  ctctcgggaattcgccgacggcgtacggctaaaattcaccggactgtccggtgtgcaccg 183935 
AC208412.4 >4501    ............................................................ 4560   

AC210612.5 >183936  gactgtccggtgagccaacggtcggccgggccaacggtcggtcgcgcgatctgcgcggga 183995 
AC208412.4 >4561    ............................................................ 4620   

AC210612.5 >183996  cacgtggccgagccaacggtcggaagggggcaccggactgtccggtgtgcaccggacatg 184055 
AC208412.4 >4621    ............................................................ 4680   

AC210612.5 >184056  tccggtgcaccaacggctcccgcatctgcaacggtcgactgcgctgtttaaggaaggaaa 184115 
AC208412.4 >4681    ............................................................ 4740   

AC210612.5 >184116  tcgggcaccggacagtgtccggtgcgcaccggactgtccggtgcgcccgacgacagaagg 184175 
AC208412.4 >4741    ............................................................ 4800   

AC210612.5 >184176  caaagatggccttccagatttgttctcaacggctcctagctgccttggggctataaaagg 184235 
AC208412.4 >4801    ............................................................ 4860   

AC210612.5 >184236  gacccctaggcgcatggagggagacaccaagcaacctttgagcattcttgatcatccaca 184295 
AC208412.4 >4861    ............................................................ 4920   

AC210612.5 >184296  ctcagtctttgcgcatccgtttgttattctaagagattcgagctccgttcttgtgagaac 184355 
AC208412.4 >4921    ............................................................ 4980   

AC210612.5 >184356  tttgagatagtctttgagctcgattcttggccgtgtgtgtgcgcatttcgctgtggattt 184415 
AC208412.4 >4981    ............................................................ 5040   

AC210612.5 >184416  gtgtgtgttgcttccctcccttactccgtgcttctttgtgaactttacgtgtaagggcga 184475 
AC208412.4 >5041    ............................................................ 5100   

AC210612.5 >184476  gagactccaatttgtggagattcctcgcgagtgggataaagataagcaaggcaaaacacc 184535 
AC208412.4 >5101    ............................................................ 5160   

AC210612.5 >184536  gtggtattcaagtgggtctttggaccgcttgagaggggttgattgcaaccctcgtccgtt 184595 
AC208412.4 >5161    ............................................................ 5220   

AC210612.5 >184596  gggacgccacaacgtggagtaggcaagttttgtacttggccgaaccacgggataaatcac 184655 
AC208412.4 >5221    ............................................................ 5280   

AC210612.5 >184656  tgtgtcttctctgtgttgaattctttgtgattgtcatattgtgcaagatcccctctttag 184715 
AC208412.4 >5281    ............................................................ 5340   

AC210612.5 >184716  ccacttggcaattattgtgctaacccttaacaagtttttgtggctataagtttaagtttt 184775 
AC208412.4 >5341    ............................................................ 5400   

AC210612.5 >184776  acaggatcacctattcaccccccctctaggtgctctcaggaagtgaggacgatgaagcaa 184835 
AC208412.4 >5401    ............................................................ 5460   

AC210612.5 >184836  gatctcttctctcatcgtccgtcctcttcgttagtggccttttctcctgtgagtttgtcc 184895 
AC208412.4 >5461    ............................................................ 5520   

AC210612.5 >184896  ttcccttcctctccaatgtttgtgtcttagggtttgtgtttcttgctgaggtgtccatgt 184955 
AC208412.4 >5521    ............................................................ 5580   

AC210612.5 >184956  cgaggcgtgctggatggcgtttggcagggcagaggcgactgtctccctccagtgaggtcg 185015 
AC208412.4 >5581    ............................................................ 5640   

AC210612.5 >185016  aggtgaaccacgagttgccgtcatcgtcagagtcgggtcgtcgccaccgccgcacccgca 185075 
AC208412.4 >5641    ............................................................ 5700   

AC210612.5 >185076  ccatcgacgatcgtcgcctcggtccctgtgatgcgactggtggggtctcgaagagcgtgt 185135 
AC208412.4 >5701    ............................................................ 5760   

AC210612.5 >185136  tagctagctattgtgtttggctatgtgtccggttcgttcaccttctctcctagaaagaaa 185195 
AC208412.4 >5761    ............................................................ 5820   

AC210612.5 >185196  cttgcgcagatctcatggagtgctattattgttttgattagtttcttgtcgattctgagt 185255 
AC208412.4 >5821    ............................................................ 5880   

AC210612.5 >185256  gtgcatgaatgtaaagcccaaaaatttgcataagagaaaaataacaaaataaataattac 185315 
AC208412.4 >5881    ............................................................ 5940   

AC210612.5 >185316  agaaaagaaaatgaaccttatgttgagattcttgtattctcatgtttgtattcaaattag 185375 
AC208412.4 >5941    ............................................................ 6000   

AC210612.5 >185376  tgagacaagtttagagggaaggacaataactagagaaaagaattacatattaaattatta 185435 
AC208412.4 >6001    ............................................................ 6060   

AC210612.5 >185436  ttttgcactttcttaaaaacatattaagtaaaatgttcctttcataaagattaaggtaat 185495 
AC208412.4 >6061    ............................................................ 6120   

AC210612.5 >185496  ggatattcattttttacttgaaatttgatcacatactcaaaagtaatattttcttttcta 185555 
AC208412.4 >6121    ............................................................ 6180   

AC210612.5 >185556  aaatgaaatgaatgtgtgcatggcacattttggaccttggtctaaaacaaagaaataaaa 185615 
AC208412.4 >6181    ............................................................ 6240   

AC210612.5 >185616  taattaatataaatatatgaaaatatgtactttgaattcatattgtagcatctgaacgca 185675 
AC208412.4 >6241    ............................................................ 6300   

AC210612.5 >185676  aattcagatttttgatttcttttatgtgaatttgaaaactgaaaagcaaacaaaaagaaa 185735 
AC208412.4 >6301    ............................................................ 6360   

AC210612.5 >185736  agaaaacaggaaaaataaaagaaaaggacaaaagcctcagctgggctggttttcctcctg 185795 
AC208412.4 >6361    ............................................................ 6420   

AC210612.5 >185796  tcggcccacttccacttcatcccgcgcccgcagcccagctccacattcacgcccgcgatc 185855 
AC208412.4 >6421    ............................................................ 6480   

AC210612.5 >185856  ctgtttggcgacactggcaggcagggcccacaacccagtctcgtctccactgcgggtgcg 185915 
AC208412.4 >6481    ............................................................ 6540   

AC210612.5 >185916  aactcggtcattgacatgcgggaccatctcatcagcgccatcttctccctgccgtagccg 185975 
AC208412.4 >6541    ............................................................ 6600   

AC210612.5 >185976  acatcgccgaatccaccgccgcggtttctgcggggccgttgtggccaatcccgcagaccc 186035 
AC208412.4 >6601    ............................................................ 6660   

AC210612.5 >186036  ggccttcctccgctataaacctctggtcgcttgtgaccttagccaagcccagctcctgcg 186095 
AC208412.4 >6661    ............................................................ 6720   

AC210612.5 >186096  taggggaacaccaccgtcagagagaagaaaaggtgaggagaagatttggtcgccgtcgtc 186155 
AC208412.4 >6721    ............................................................ 6780   

AC210612.5 >186156  gtgcgcgagttcgggtgccgccaggagttcggtggcaggtcgaggggttgctcgccgggg 186215 
AC208412.4 >6781    ............................................................ 6840   

AC210612.5 >186216  tctggggatctggcttgtagtgtattggactttgggggtgctcgcgaccgtgaagaattt 186275 
AC208412.4 >6841    ............................................................ 6900   

AC210612.5 >186276  ctcaccggagttgattctaccccgcctggccgccatacccagtgcacaacaccaccctct 186335 
AC208412.4 >6901    ............................................................ 6960   

AC210612.5 >186336  gccaatcggaggtaattgcgccacccatgggattcccctttatctgttctacgtatagca 186395 
AC208412.4 >6961    ............................................................ 7020   

AC210612.5 >186396  ccctcgggtttgtagagtagtgcgtgggagctttgaatcgggtaatgccggcgtgtgcgc 186455 
AC208412.4 >7021    ............................................................ 7080   

AC210612.5 >186456  caccgtggggatgtggcggcgccgctgctcggtgtcgtcgattagtgaggatggggtggc 186515 
AC208412.4 >7081    ............................................................ 7140   

AC210612.5 >186516  tgccgtcggatttgtggcggacgcgtaggattgggggtgtcagcatggttttgtttcgtg 186575 
AC208412.4 >7141    ............................................................ 7200   

AC210612.5 >186576  tgatctcgtccgttgatcgcagtgtgggtggctccgagttagaagccgtgtgcaccgttg 186635 
AC208412.4 >7201    ............................................................ 7260   

AC210612.5 >186636  gttccaaaatgggcggtccagatttgacccgtgatgccccattaccgggttccgatctga 186695 
AC208412.4 >7261    ............................................................ 7320   

AC210612.5 >186696  ccattgatcctagatcaagcgggtcctatgcgatctgggatgttttaaacccatgccgtt 186755 
AC208412.4 >7321    ............................................................ 7380   

AC210612.5 >186756  gatctttgcgtggtcgggctagattggaaagggaataacgattcgcttgtgttgaccgtg 186815 
AC208412.4 >7381    ............................................................ 7440   

AC210612.5 >186816  gtcgtcgatcggtgatcccaggtccatgtcccataccccttcgtgatctaatctgaactc 186875 
AC208412.4 >7441    ............................................................ 7500   

AC210612.5 >186876  ttcgttttggatccagcggcgggatcgcgcccgtgtgtaagccgcctcgccaatttgcaa 186935 
AC208412.4 >7501    ............................................................ 7560   

AC210612.5 >186936  atgagccctgggattttggtaaatcaacccgtcgtctgtactgagtatagaaacattaca 186995 
AC208412.4 >7561    ............................................................ 7620   

AC210612.5 >186996  aataagttcgagttcttctaatttagtctctagattccttaaaagctgtaacactataaa 187055 
AC208412.4 >7621    ............................................................ 7680   

AC210612.5 >187056  aattattaaataaaataatgcatttagttattaatggtatttatggtaataaattttctt 187115 
AC208412.4 >7681    ............................................................ 7740   

AC210612.5 >187116  ttaagtgtttgttatttacttgcatttggaatgatttttgattgctcagaattgattttg 187175 
AC208412.4 >7741    ............................................................ 7800   

AC210612.5 >187176  gatattgaataacatttctttttaaatggaaatccaaataaataatataattattagtaa 187235 
AC208412.4 >7801    ............................................................ 7860   

AC210612.5 >187236  aaaataaatattttatttataaatatttttggtttaattattatgaatttcagggttatt 187295 
AC208412.4 >7861    ............................................................ 7920   

AC210612.5 >187296  tgaaaatatattttgaattagaaagaaaaaaaagaaaaagaaaaagaaacccttgtctga 187355 
AC208412.4 >7921    ............................................................ 7980   

AC210612.5 >187356  ttcttcgtctatcagaaggtactaatgagaagcattgcaagatgatcaagctaggattgc 187415 
AC208412.4 >7981    ............................................................ 8040   

AC210612.5 >187416  agaacttgaagtgaagtttgccagaagaaaccctttcaaagctattgacgatgccctatt 187475 
AC208412.4 >8041    ............................................................ 8100   

AC210612.5 >187476  ttctgtcttatccccactccgcaagaagttttgttatggatcccgtagatctattaattg 187535 
AC208412.4 >8101    ............................................................ 8160   

AC210612.5 >187536  acttcttggttaggttgataggattgttctttagtattaagattttcgactagatcggta 187595 
AC208412.4 >8161    ............................................................ 8220   

AC210612.5 >187596  atggcgatattatattatagtggttttctaatccctaatattgctatataacccttgact 187655 
AC208412.4 >8221    ............................................................ 8280   

AC210612.5 >187656  tcttatatttttgttttcttaccattgtattgccacccttgcgcaatatctactttgata 187715 
AC208412.4 >8281    ............................................................ 8340   

AC210612.5 >187716  tattaaacctttgcctctctacttttctccttgataacactttctccctaacttcatatc 187775 
AC208412.4 >8341    ............................................................ 8400   

AC210612.5 >187776  cttggttgtatcatttatcctcactttaatagttcatggttatcttatttcactcttggc 187835 
AC208412.4 >8401    ............................................................ 8460   

AC210612.5 >187836  caccaacaaatatgtcttgtctaactccttgatgattcttacccaactccttgatgttat 187895 
AC208412.4 >8461    ............................................................ 8520   

AC210612.5 >187896  aatatctttcttaatcttgtgtcaccttttgttttggttgaacgagtagaattggattgt 187955 
AC208412.4 >8521    ............................................................ 8580   

AC210612.5 >187956  gttgtgctggtatgtttgaattcattgtcccttgtgttcatgattgatttgcttctttga 188015 
AC208412.4 >8581    ............................................................ 8640   

AC210612.5 >188016  aatgattgttggtgtattgtgtgacttttgtccacaatggcattagttagctaggtaaaa 188075 
AC208412.4 >8641    ............................................................ 8700   

AC210612.5 >188076  ccttagatagatgggttttctctactctctataattcgtctttgctcaaccctttcgtcc 188135 
AC208412.4 >8701    ............................................................ 8760   

AC210612.5 >188136  cttccattcttccatacccatacagatgtcagaccttggaatgtcaactacaagtgatgt 188195 
AC208412.4 >8761    ............................................................ 8820   

AC210612.5 >188196  cactaaatgcaaagaatgcggtgtgttggcaagtcaaaacaacactataaataaaacagc 188255 
AC208412.4 >8821    ............................................................ 8880   

AC210612.5 >188256  tgatgaacagacatttaagacaaaaaaggatgcacaaccaaaccaaccgacaagtgacct 188315 
AC208412.4 >8881    ............................................................ 8940   

AC210612.5 >188316  tggaacatgttgttgttgtgagtactatggaattccttgtcaccaaatcaatgcaaacaa 188375 
AC208412.4 >8941    ............................................................ 9000   

AC210612.5 >188376  aagtgaaactacaaaacaaaagagccatattttattttctggcgttaaaagacagatgtc 188435 
AC208412.4 >9001    ............................................................ 9060   

AC210612.5 >188436  tccccaagaacaactaataacagattctctcatacctaatgcactatcagttgatgaatt 188495 
AC208412.4 >9061    ............................................................ 9120   

AC210612.5 >188496  gcaaagtattacaaaaaggaaacatcacaaggatgcccagccccaagaagaaacacatga 188555 
AC208412.4 >9121    ............................................................ 9180   

AC210612.5 >188556  atgttacattgatggatggactattacttgcacacagtttcagcctcatggtcgcatcag 188615 
AC208412.4 >9181    ............................................................ 9240   

AC210612.5 >188616  gtccaagaaacaaaaagggaaacatggaaaaagtcaagaaataacttcaagaaaagcttg 188675 
AC208412.4 >9241    ............................................................ 9300   

AC210612.5 >188676  ctatcaatgtggacgtgaaggtcattacttccgtaactgtcctgagaagagtttactaca 188735 
AC208412.4 >9301    ............................................................ 9360   

AC210612.5 >188736  aatcacctccgagatgaagctatcttagtcttcagacatggaatatgaacaaaaatgtat 188795 
AC208412.4 >9361    ............................................................ 9420   

AC210612.5 >188796  agaaacttctaccaacaatgtaaagacaactccaccatgtaacttatcaagtcgtgcttg 188855 
AC208412.4 >9421    ............................................................ 9480   

AC210612.5 >188856  ctttggctgtggtgaaatcgaccatcttcttaatagttgtcctaagaaggatgtggagat 188915 
AC208412.4 >9481    ............................................................ 9540   

AC210612.5 >188916  caataagatccaaaagaaaatatgatagtcgcctagagggggggtgaatagggcgaaact 188975 
AC208412.4 >9541    ............................................................ 9600   

AC210612.5 >188976  gaaatttacaaatataaacacaactacaagccggggttagcgttagtaataataaacgag 189035 
AC208412.4 >9601    ............................................................ 9660   

AC210612.5 >189036  tccgcaagagagggcgcaaaacaaatcccaagtgaaaaggcaagtgagacacggagattt 189095 
AC208412.4 >9661    ............................................................ 9720   

AC210612.5 >189096  gttttaccgaggttcggttcttgcaaacctactccccgttgaggaggccacaaaggccgg 189155 
AC208412.4 >9721    ............................................................ 9780   

AC210612.5 >189156  gtctctttcaacccttccctctctcaaacggtcccttggaccgagtgagcttctcttctc 189215 
AC208412.4 >9781    ............................................................ 9840   

AC210612.5 >189216  aaatcaaagccgggaacaaaacttccccgcaagggccaccacacaattggtgcctcttgc 189275 
AC208412.4 >9841    ............................................................ 9900   

AC210612.5 >189276  cttgattacaatggagttgtgatctcaagaacaagtgagaaagaaaagaagcaatccaag 189335 
AC208412.4 >9901    ............................................................ 9960   

AC210612.5 >189336  cgcaagagctcaaatgaacacggcaaatcactctcactagtcactagggctttgtgtgga 189395 
AC208412.4 >9961    ............................................................ 10020  

AC210612.5 >189396  attggagaggatttgatctctttagtgtgtctagaattgaatgctagagctcttgtagta 189455 
AC208412.4 >10021   ............................................................ 10080  

AC210612.5 >189456  gttgagaagtggaaaacttggatgcaatgaatggtggggtggttggggtatttatagccc 189515 
AC208412.4 >10081   ............................................................ 10140  

AC210612.5 >189516  caaccaccaaacttgaccgttggctggaggcgtctgctcgatggcgcaccggacagtccg 189575 
AC208412.4 >10141   ............................................................ 10200  

AC210612.5 >189576  gtgcacaccggacagtccggtgcccctgccacgtcatcactgccgttggattctgaccgt 189635 
AC208412.4 >10201   ............................................................ 10260  

AC210612.5 >189636  tggagcttctgacttgtgggcccgcctgggtgtccggtgcacaccggacaggtactgttt 189695 
AC208412.4 >10261   ............................................................ 10320  

AC210612.5 >189696  gctgtccggtgtgccagcatgggcgattctgacttctgcgcgcgcagagggcgcattaaa 189755 
AC208412.4 >10321   ............................................................ 10380  

AC210612.5 >189756  tgcgcggcagagagccgttggcgcggagatgaccgttgctccggaggcgcaccggacagt 189815 
AC208412.4 >10381   ............................................................ 10440  

AC210612.5 >189816  ccggtgcacaccggacagtccggtgaattttagcgggttagccgttggcgtttcccgaag 189875 
AC208412.4 >10441   ............................................................ 10500  

AC210612.5 >189876  ctggcgagttcctgaggccgacctcccttggcgcaccggacactgtccggtgtacaccgg 189935 
AC208412.4 >10501   ............................................................ 10560  

AC210612.5 >189936  acagtccggtgaattatagccgagtcgtcctggaaattcccgaaggtggcgagtttgagt 189995 
AC208412.4 >10561   ............................................................ 10620  

AC210612.5 >189996  ctgagtcccctggtgcaccggacaggtactgttcactgtccggtggcacaccggacagtc 190055 
AC208412.4 >10621   ............................................................ 10680  

AC210612.5 >190056  cggtgcgccagaccaggggtgccttcggtttcccctttgctcctttattgaatccaaaac 190115 
AC208412.4 >10681   ............................................................ 10740  

AC210612.5 >190116  ttggtctttttattggctgagtgtgaaccttttacacctgtataatctacacacttgggc 190175 
AC208412.4 >10741   ............................................................ 10800  

AC210612.5 >190176  aaactagttagtccaatcatttgtgttgggcaattcaaccaccaaaattatttaggaact 190235 
AC208412.4 >10801   ............................................................ 10860  

AC210612.5 >190236  aggtgtaagcctaattccctttcaatctccccctttttggtgattgatgccaacacaaac 190295 
AC208412.4 >10861   ............................................................ 10920  

AC210612.5 >190296  caaagcaaacagagatgtgcataattgaactagtttgcataacgtaagtgtaaaggttgc 190355 
AC208412.4 >10921   ............................................................ 10980  

AC210612.5 >190356  ttggaattgagccaatatagctacttacaagatatgcatggaatgtttctttcttattta 190415 
AC208412.4 >10981   ............................................................ 11040  

AC210612.5 >190416  gtattttggaccacttttgcaccaaatgttttgtttttgcaaaattttttttttgtaaat 190475 
AC208412.4 >11041   ............................................................ 11100  

AC210612.5 >190476  tcatttcaaagatcttttgcaaatagtcaaaggtaaatgaataaaagtttgcaaagcatt 190535 
AC208412.4 >11101   ............................................................ 11160  

AC210612.5 >190536  ttcaagatttgaaattttctccctttgtttcaaatgcttttcctttgactaaacaaaact 190595 
AC208412.4 >11161   ............................................................ 11220  

AC210612.5 >190596  ccccctaaattaaatcctcctcttagtgttcaagagggttttgatataccattttgaaat 190655 
AC208412.4 >11221   ............................................................ 11280  

AC210612.5 >190656  actactttctcccccttttgaacacaacaggatcccaattgataaatacttttggaaaac 190715 
AC208412.4 >11281   ............................................................ 11340  

AC210612.5 >190716  actaagtttttgaatttggtggtggtggtgcggtccttttgctttgggctcatttctccc 190775 
AC208412.4 >11341   ............................................................ 11400  

AC210612.5 >190776  cctttttggcatgaatcgccaaaaacggaatcattagagcccttatgtactatcttcccc 190835 
AC208412.4 >11401   ............................................................ 11460  

AC210612.5 >190836  tttggtcataagtaaatgagttaagattataccaaagacgaagtccttttgctttgaatt 190895 
AC208412.4 >11461   ............................................................ 11520  

AC210612.5 >190896  ctcatttctccccaaagaatagagagatgcttggagtgatggcaaagtatgagttacgga 190955 
AC208412.4 >11521   ............................................................ 11580  

AC210612.5 >190956  gtggaagcctttgtctttgccgaagactccaatttcctttcaatatacctatgacttggt 191015 
AC208412.4 >11581   ............................................................ 11640  

AC210612.5 >191016  ttgaaatagacttgaaaacacattagtcatagcatataaaagagatataattaaaggtat 191075 
AC208412.4 >11641   ............................................................ 11700  

AC210612.5 >191076  tcaaatgagctatgtgtgcaagctagcaaaagaaatttctagaatcaagaatattgagct 191135 
AC208412.4 >11701   ............................................................ 11760  

AC210612.5 >191136  catgcctaagtctggtaaaagattgttcatcaagaggcttggtaaagatatcggctaatt 191195 
AC208412.4 >11761   ............................................................ 11820  

AC210612.5 >191196  gatctttagtgttaatgtaagaaatctcgatatctcccttttgttggtgatccctaagaa 191255 
AC208412.4 >11821   ............................................................ 11880  

AC210612.5 >191256  aatgataccgaatggctatgtgcttagtgcggctatgctcaacgggattgtcggccattt 191315 
AC208412.4 >11881   ............................................................ 11940  

AC210612.5 >191316  tgattgcactctcattatcacatagcaaagggactttggttaatttgtaaccatagtccc 191375 
AC208412.4 >11941   ............................................................ 12000  

AC210612.5 >191376  gcagggtttgcctcatccaaagcaattgcgcgcaacaatgacctgcggcaatgtactcgg 191435 
AC208412.4 >12001   ............................................................ 12060  

AC210612.5 >191436  cttcggcggtggaaagagcgaccgaattttgcttctttgaagcccaagacaccaaggatc 191495 
AC208412.4 >12061   ............................................................ 12120  

AC210612.5 >191496  gtcccaagaactggcaagtccccgatgtgctcttcctattgattttacaccccgcccaat 191555 
AC208412.4 >12121   ............................................................ 12180  

AC210612.5 >191556  cggcatccgaataaccaatcaaatcaaatgtggatccccgagggtaccaaagcccaaact 191615 
AC208412.4 >12181   ............................................................ 12240  

AC210612.5 >191616  taggagtataagctaaatatctcaagattcgttttacggccgtaaggtgggattccttag 191675 
AC208412.4 >12241   ............................................................ 12300  

AC210612.5 >191676  ggtcggattggaatcttgcacacatgcaaacggaaagaataatgtccggtcgagatgcac 191735 
AC208412.4 >12301   ............................................................ 12360  

AC210612.5 >191736  ataaataaagcaatgaaccaatcatcgaccggtataccttttgatccacggacttacctc 191795 
AC208412.4 >12361   ............................................................ 12420  

AC210612.5 >191796  ccgtgtcgaggtcgagatgcccattggttcccatgggtgtcttgatgggcttggcatcct 191855 
AC208412.4 >12421   ............................................................ 12480  

AC210612.5 >191856  tcattccaaacttggttagaatgtcttgagtgtacttcgtttggcaaatgaaggtgccct 191915 
AC208412.4 >12481   ............................................................ 12540  

AC210612.5 >191916  cttggagttgcttgacttggaatcctagaaaatacttcaactcccccatcatcgacatct 191975 
AC208412.4 >12541   ............................................................ 12600  

AC210612.5 >191976  cgaatttctgtgtcatgatcctactaaattcttcacatgtagactcgttagtagacccaa 192035 
AC208412.4 >12601   ............................................................ 12660  

AC210612.5 >192036  atataatatcatcaacataaatttggcatacaaacaagtcattttcaagagttttagtaa 192095 
AC208412.4 >12661   ............................................................ 12720  

AC210612.5 >192096  agagtgtaggatcggccttgccaactttgaagccattagaaataaggaaatctcttaggc 192155 
AC208412.4 >12721   .........................................................c.. 12780  

AC210612.5 >192156  attcataccatgctcttggggcttgcttgagcccataaagcgccttagagagcctataga 192215 
AC208412.4 >12781   ............................................................ 12840  

AC210612.5 >192216  catggttagggtactcactgtcttcaaagccgggaggttgctcaacatagacctcttcct 192275 
AC208412.4 >12841   ............................................................ 12900  

AC210612.5 >192276  tgattggtccgttgaggaaggcactcttcacgtccattcgataaagcttgaagccatggt 192335 
AC208412.4 >12901   ............................................................ 12960  

AC210612.5 >192336  aagtagcataggctaataatatgcgaattgactcaagcctagctacgggtgcataggttt 192395 
AC208412.4 >12961   ............................................................ 13020  

AC210612.5 >192396  caccaaaatccaaaccttcgacttgtgaataccccttggccacgagtcgagctttgttcc 192455 
AC208412.4 >13021   ............................................................ 13080  

AC210612.5 >192456  ttgtcaccacaccatgctcgtcttgcttgttgcggaagacccacttggttcctacaacat 192515 
AC208412.4 >13081   ............................................................ 13140  

AC210612.5 >192516  tttgattaggacgtggaactaaatgccatacctcattcctcgtgaaattgttgagctcct 192575 
AC208412.4 >13141   ............................................................ 13200  

AC210612.5 >192576  cttgcatcgccattatccaatccgcatcttggagtgcttcctctaccctgtgtggctcaa 192635 
AC208412.4 >13201   ............................................................ 13260  

AC210612.5 >192636  tagaggaaacaaaagagtaatgttcacaaaaatgtgcaacccaagattgagtagttaccc 192695 
AC208412.4 >13261   ............................................................ 13320  

AC210612.5 >192696  ccttatgaatgtcgccgaggatggtgtcgacggggtgatctcgttggattgcttggtgga 192755 
AC208412.4 >13321   ............................................................ 13380  

AC210612.5 >192756  ctcttgggtgtggcggccttggctcttcctcatcctccttttcttgatcaattgcatctc 192815 
AC208412.4 >13381   ............................................................ 13440  

AC210612.5 >192816  ccccttgatcattgccatcatcttgaggtggctcatcttcttgattttgcccttcatcaa 192875 
AC208412.4 >13441   ............................................................ 13500  

AC210612.5 >192876  cttgagcttcatcctcattttgagttggtggagatgcttgcatggaggaggacggttgat 192935 
AC208412.4 >13501   ............................................................ 13560  

AC210612.5 >192936  cttgtgctcttgaaggctcttcggattccttaggacacacgtccccaatggacatgttcc 192995 
AC208412.4 >13561   ............................................................ 13620  

AC210612.5 >192996  ttagcgctatgcatggggcctcttcattacctatctcatcaagatcaacttgctctactt 193055 
AC208412.4 >13621   ............................................................ 13680  

AC210612.5 >193056  gagagccgttagtttcatcaaacacaacgtcacatgagacttcaactagtccagtggact 193115 
AC208412.4 >13681   ............................................................ 13740  

AC210612.5 >193116  tgttaaagaccctatatgcccttgtgtttgagtcataaccaagtaaaaagccttctacag 193175 
AC208412.4 >13741   ............................................................ 13800  

AC210612.5 >193176  ttttaggagcaaatttagattttctacctcttttaacaagaataaagcatttgctaccaa 193235 
AC208412.4 >13801   ............................................................ 13860  

AC210612.5 >193236  aaactttaaagtatgaaatgttgggctttttaccggttaggagttcatatgatgtcttct 193295 
AC208412.4 >13861   ............................................................ 13920  

AC210612.5 >193296  tgaggattcggtgaagatataaccggttgatggcgtagcaggcggtgttgaccgcttcgg 193355 
AC208412.4 >13921   ............................................................ 13980  

AC210612.5 >193356  cccaaaaccggtccggtgtcttgaactcatcaagcatggttcttgccatgtccaatagag 193415 
AC208412.4 >13981   ............................................................ 14040  

AC210612.5 >193416  ttcgattctttctctctactacaccattttgttgtggcgtgtagggagaggagaactcat 193475 
AC208412.4 >14041   ............................................................ 14100  

AC210612.5 >193476  gcttgatgccctcctcctcaaggaagccttcaatttgtgagttcttgaacttcgtcccgt 193535 
AC208412.4 >14101   ............................................................ 14160  

AC210612.5 >193536  tgtcgcttcttattttcttgatccttaaggcgaactcattttgagcccgtctcaagaatc 193595 
AC208412.4 >14161   ............................................................ 14220  

AC210612.5 >193596  cctttaaagtctcttgggtttgagatttttcctgtaaaaagaatacccaagtgaagcgag 193655 
AC208412.4 >14221   ............................................................ 14280  

AC210612.5 >193656  aataatcatccactattacaagacaatacttactcccgccgatgcttatgtaagcaatcg 193715 
AC208412.4 >14281   ............................................................ 14340  

AC210612.5 >193716  ggccgaatagatccatgtggagtagctcaagcggcctgtcggtcgtcatgatgttcttgt 193775 
AC208412.4 >14341   ............................................................ 14400  

AC210612.5 >193776  gtggatgatggactccaacttgcttccctgcctggcatgcgctacaaatcctgtctttct 193835 
AC208412.4 >14401   ............................................................ 14460  

AC210612.5 >193836  caaaatgaacatttgttaatcctaaaatgtgttctccctttagaagcttgtgaagattct 193895 
AC208412.4 >14461   ............................................................ 14520  

AC210612.5 >193896  tcatcccaacatgggctagtcggcggtgccagagccaacccatgttagtcttagcaatta 193955 
AC208412.4 >14521   ............................................................ 14580  

AC210612.5 >193956  agcaagtgtcgagttcagctctatcaaaatctaccaagtatagctgaccctctaacactc 194015 
AC208412.4 >14581   ............................................................ 14640  

AC210612.5 >194016  ccttaaaagctattgaatcatcacttcttctaaagacagtgacacctatatcagtaaaaa 194075 
AC208412.4 >14641   ............................................................ 14700  

AC210612.5 >194076  gacagttgtagcccatttgacataattgggaaacagaaagcaagttgtaatctaaagaat 194135 
AC208412.4 >14701   ............................................................ 14760  

AC210612.5 >194136  caacaagaaaaacattggaaatagaatggtcaggagacatagcaattttaccaagtcctt 194195 
AC208412.4 >14761   ............................................................ 14820  

AC210612.5 >194196  tgaccaaaccttgatttccatccccgaatgtgatagctcgttggggatcttggtttttct 194255 
AC208412.4 >14821   ............................................................ 14880  

AC210612.5 >194256  catatgaggagaacatccttttctcccctgtcatgtggtttgtgcacccgctgtcgagta 194315 
AC208412.4 >14881   ............................................................ 14940  

AC210612.5 >194316  tccaacttgagcccccggatgcataaacctacaaaacaattttagttcttgactttaggt 194375 
AC208412.4 >14941   ............................................................ 15000  

AC210612.5 >194376  acccaaatggttttgggtcctttggcattagacacaagaactttgggtacccaaacacaa 194435 
AC208412.4 >15001   ............................................................ 15060  

AC210612.5 >194436  gtcttggaactcttgtgtttgcccccaacaaacttggcaactaccttgccggatttgtta 194495 
AC208412.4 >15061   ............................................................ 15120  

AC210612.5 >194496  gtaagcacataagaagcatcaaaagttttaaatgaaatggcatgatc 194542 
AC208412.4 >15121   ............................................... 15167

Events

Type

Date

Whodid

Comment

296940

InitHasAlign

01/15/2014 17:53:44

cgi_chen

find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Aug  1 2013. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 545251919
Info: Running Blast Filter: 0
Info: Determined ID: gi|545251919 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545251919 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545251919 needs Merging.
Info: Best Rank: 1 in  for 545251919 of 1
Info:  NG returned 1 alignments

tpf_solo for TPF_updated_1_v2

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH201-102K21	AC210612.5	100%	pos 154525 (R+)
CH201-126M20	AC210612.5	99.01%	pos 83334 (R-)	AC208412.4	99.38%	pos 163962 (F-)
CH201-142F8	AC210612.5	100%	pos 184736 (R+)
CH201-142F8	AC208412.4	100%	pos 5361 (R+)
CH201-145D5	AC208412.4	99.83%	pos 82087 (R+)
CH201-152D5	AC208412.4	100%	pos 82154 (R+)
CH201-17P22	AC208412.4	99.83%	pos 33631 (R+)
CH201-228D11	AC210612.5	100%	pos 184861 (R+)
CH201-228D11	AC208412.4	100%	pos 5486 (R+)
CH201-230J21				AC208412.4	99.08%	pos 81299 (F-)
CH201-292E13	AC210612.5	100%	pos 100682 (R-)
CH201-299E6				AC210612.5	100%	pos 64243 (F+)
CH201-301A3				AC208412.4	99.6%	pos 158982 (F+)
CH201-303J19	AC210612.5	99.13%	pos 102650 (R+)
CH201-310F18	AC208412.4	100%	pos 80861 (R-)	AC210612.5	100%	pos 127333 (F-)
CH201-310F18				AC210612.5	99.86%	pos 126800 (F-)
CH201-316I3	AC208412.4	99.37%	pos 98240 (R+)
CH201-318A21	AC210612.5	97.03%	pos 137294 (R-)	AC208412.4	100%	pos 125611 (F-)
CH201-31J8	AC208412.4	100%	pos 33722 (R+)
CH201-326B23				AC208412.4	100%	pos 120084 (F+)
CH201-396O15	AC208412.4	100%	pos 78585 (R+)
CH201-399A5	AC210612.5	100%	pos 62437 (R-)
CH201-399A5	AC210612.5	100%	pos 62012 (R-)
CH201-449N15	AC210612.5	100%	pos 160267 (R+)
CH201-475H22				AC210612.5	100%	pos 102650 (F+)
CH201-475H22				AC210612.5	100%	pos 102687 (F+)
CH201-485A10	AC210612.5	99.73%	pos 161322 (R-)	AC208412.4	100%	pos 64950 (F-)
CH201-485A10	AC210612.5	100%	pos 161798 (R-)	AC208412.4	100%	pos 64919 (F-)
CH201-51G17	AC208412.4	100%	pos 78797 (R+)
CH201-535E11				AC208412.4	100%	pos 97236 (F+)
CH201-539P4				AC210612.5	99.48%	pos 521 (F+)
CH201-548P16	AC208412.4	100%	pos 114952 (R+)
CH201-548P16	AC208412.4	100%	pos 114625 (R+)
CH201-553H5				AC208412.4	100%	pos 43812 (F-)
CH201-553H5				AC208412.4	100%	pos 44329 (F-)
ZMMBBb-135P13	AC210612.5	98.65%	pos 165969 (R+)
ZMMBBb-141L14	AC208412.4	99.23%	pos 129338 (R+)
ZMMBBb-198L22				AC208412.4	98.43%	pos 131362 (F+)
ZMMBBb-217D11				AC208412.4	97.58%	pos 35452 (F-)
ZMMBBb-251N4	AC208412.4	99.3%	pos 80610 (R+)
ZMMBBb-260J24	AC208412.4	99.1%	pos 42734 (R-)	AC210612.5	99.84%	pos 165260 (F-)
ZMMBBb-261J4	AC208412.4	99.85%	pos 29838 (R-)
ZMMBBb-261P16				AC208412.4	98.44%	pos 36166 (F+)
ZMMBBb-329K4				AC208412.4	98.02%	pos 155711 (F-)
ZMMBBb-386F14	AC208412.4	97.57%	pos 35405 (R-)	AC210612.5	98.43%	pos 163826 (F-)
ZMMBBb-397C14				AC208412.4	99.27%	pos 30268 (F-)
ZMMBBb-3D23				AC208412.4	100%	pos 105392 (F+)
ZMMBBb-3L6				AC210612.5	99.87%	pos 21553 (F-)
ZMMBBb-402J15				AC210612.5	97.83%	pos 26675 (F-)
ZMMBBb-429C4				AC208412.4	99.6%	pos 133517 (F+)
ZMMBBb-482C13				AC210612.5	98.55%	pos 188321 (F-)
ZMMBBb-482C13				AC208412.4	98.55%	pos 8946 (F-)
ZMMBBb-494B17	AC208412.4	98.65%	pos 26391 (R+)
ZMMBBb-506M17	AC208412.4	98.26%	pos 24322 (R-)	AC210612.5	97.73%	pos 151588 (F-)
ZMMBBb-519D2	AC208412.4	99.3%	pos 42366 (R+)
ZMMBBb-535P12	AC208412.4	97.46%	pos 155311 (R-)
ZMMBBb-555P9				AC208412.4	98.04%	pos 156235 (F+)
ZMMBBb-560K8	AC208412.4	97.27%	pos 31378 (R-)
ZMMBBb-580E4				AC208412.4	98.8%	pos 42387 (F+)
ZMMBBb-602I9	AC208412.4	97.99%	pos 45768 (R+)
ZMMBBb-611F18	AC208412.4	97.05%	pos 77431 (R-)
ZMMBBb-621F15				AC208412.4	98.77%	pos 155431 (F-)
ZMMBBb-624H18				AC208412.4	97.96%	pos 81358 (F+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
Z_AI-1028I18	AC210612.5	100%	pos 14429 (R-)
Z_AI-1044A13	AC210612.5	100%	pos 84271 (R+)
Z_AI-1048F24	AC208412.4	98.26%	pos 164943 (R+)
Z_AI-1062P21	AC210612.5	99.72%	pos 4874 (R-)
Z_AI-1194N6	AC210612.5	100%	pos 80321 (R-)
Z_AI-1245F23	AC210612.5	100%	pos 80424 (R+)	AC210612.5	100%	pos 122586 (F-)
Z_AI-1274M13	AC208412.4	100%	pos 106471 (R+)
Z_AI-1296N17				AC210612.5	99.13%	pos 143546 (F+)
Z_AI-1322M12				AC210612.5	100%	pos 101825 (F+)
Z_AI-1401B4	AC210612.5	97.3%	pos 33912 (R-)
Z_AI-1462B12	AC210612.5	100%	pos 62089 (R+)
Z_AI-1472M10	AC210612.5	99.4%	pos 104888 (R+)
Z_AI-261M15	AC208412.4	100%	pos 125270 (R-)	AC208412.4	98.99%	pos 85652 (F+)
Z_AI-267N5	AC210612.5	99.68%	pos 129182 (R-)	AC210612.5	99.8%	pos 129254 (F-)
Z_AI-321B12	AC208412.4	100%	pos 20298 (R-)	AC210612.5	100%	pos 69474 (F-)
Z_AI-329F11	AC208412.4	100%	pos 156518 (R+)
Z_AI-348H23				AC210612.5	100%	pos 87950 (F-)
Z_AI-376P20	AC210612.5	100%	pos 58175 (R+)
Z_AI-383C15				AC208412.4	99.47%	pos 22073 (F+)
Z_AI-414L2				AC208412.4	100%	pos 112518 (F-)
Z_AI-434K4				AC210612.5	100%	pos 103859 (F+)
Z_AI-457L23	AC208412.4	99.86%	pos 45871 (R+)
Z_AI-601I15	AC208412.4	100%	pos 19987 (R-)
Z_AI-640N12	AC208412.4	99.71%	pos 62529 (R-)	AC208412.4	100%	pos 32760 (F+)
Z_AI-645O6				AC210612.5	99.56%	pos 14907 (F-)
Z_AI-702A17	AC208412.4	100%	pos 82210 (R+)	AC208412.4	100%	pos 119824 (F-)
Z_AI-703M1	AC210612.5	100%	pos 136804 (R-)
Z_AI-704D16	AC210612.5	100%	pos 5315 (R-)
Z_AI-758O17				AC210612.5	100%	pos 131264 (F-)
Z_AI-800A5	AC208412.4	100%	pos 78870 (R-)
Z_AI-809G18	AC210612.5	100%	pos 33630 (R-)
Z_AI-824O13				AC210612.5	100%	pos 86880 (F+)
Z_AI-837E9				AC210612.5	100%	pos 63510 (F+)
Z_AI-849F21				AC208412.4	100%	pos 46365 (F-)
Z_AI-885B15	AC208412.4	100%	pos 68302 (R-)
Z_AI-917D11	AC208412.4	100%	pos 108447 (R+)
Z_AI-929E1	AC208412.4	100%	pos 35650 (R+)	AC208412.4	100%	pos 68403 (F-)
Z_AI-962F20	AC208412.4	99.71%	pos 64888 (R+)	AC208412.4	98.95%	pos 102887 (F-)

Repeats

acc	start	stop	repeat id	strand	name	family	class

Join Legend

Curator Links

Alignment for AC210612.5 and AC208412.4

Alignment Summary

Alignment 1 of 1