Alignment last updated: 12/19/2014 16:00:14

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for AC204663.4 and AC205491.4

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AC204663.4 Zea mays chromosome 1 clone ZMMBBb-584C8, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces [htgs_limited_order]

Length: 103,964 bp

AC205491.4 Zea mays chromosome 1 clone CH201-319D11, *** SEQUENCING IN PROGRESS ***, 18 unordered pieces [htgs_limited_order]

Length: 170,342 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 117768
Total Length: 17565
Aligned Length: 17557
Percent Identity: 99.9373
Number of Gaps: 8
Number of Mismatches: 11
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
A	103964	17561	+	+	chenhc	Taxid 4577 chrom 1 Primary assembly	2014-12-19 16:00:14.506	121100	117768

Alignment 1 of 1

 AC204663.4 : + : 86403..103964
 AC205491.4 : + : 1..17560
 Mismatches = 11, Gaps = 8, Length = 17565
 Percent identity = 99.94%
 Score = 3.232e+04 bits (17504), Expect = 0
  2 BAC and 1 Fosmid bridging clones.
  0 BAC and 0 Fosmid concordant clones.
  2 BAC and 1 Fosmid discordant clones.

AC204663.4 >86403   gatcagtctggggaagaacactttgcctctcacctggcgcaccacctctttgctcctcat 86462  
AC205491.4 >1       ............................................................ 60     

AC204663.4 >86463   cagcctcctcccaactggtgatctttggattggcgcctctctctttttggttcttgttgc 86522  
AC205491.4 >61      ............................................................ 120    

AC204663.4 >86523   caaaaagggggagaaggtttattagactggcagtacattttatttttgtaatgaacaatc 86582  
AC205491.4 >121     ............................................................ 180    

AC204663.4 >86583   ggtttgtaataactatttggtctatcgtatgatgcatgcatggctctgaagccataaaca 86642  
AC205491.4 >181     ............................................................ 240    

AC204663.4 >86643   tttttatgatgtgatgagatgagttatcattattgtaatagcagtagtaatttttcatat 86702  
AC205491.4 >241     ............................................................ 300    

AC204663.4 >86703   catatgctatgcaataatgagcttgaatgtgtaatttttactctttctatctaattatgt 86762  
AC205491.4 >301     ............................................................ 360    

AC204663.4 >86763   ttcattcctcattgttttgtgtatggtgttgattgttctctctctctaaatatgttgcaa 86822  
AC205491.4 >361     ............................................................ 420    

AC204663.4 >86823   attgacatatcaagtcaatgttaatatcgcaaaactcatacacatatttagggggagcta 86882  
AC205491.4 >421     ............................................................ 480    

AC204663.4 >86883   cacatacacaagggattttatcttgcaagtacttgtaacttttaattcttatttctactc 86942  
AC205491.4 >481     ............................................................ 540    

AC204663.4 >86943   cagtttgttttggcatcaatcaccaaaaagggggagattgtaagtgcaatcaaccctaat 87002  
AC205491.4 >541     ............................................................ 600    

AC204663.4 >87003   taaaggttttggtgattaatgacaaaacaaactgagattctaacaagtttgctccaagca 87062  
AC205491.4 >601     ............................................................ 660    

AC204663.4 >87063   tgtacacagcaattctacagacaggagaagcacagatcttacaagcataaaagtagaaag 87122  
AC205491.4 >661     ............................................................ 720    

AC204663.4 >87123   cacagcggatttaaaattccacatcaaatggcgtgctccaagtgcttagaaacaacagcg 87182  
AC205491.4 >721     ............................................................ 780    

AC204663.4 >87183   gcgctaaatttataattcttgagtcataggaatcgccgtgcaattaagagggatccgcga 87242  
AC205491.4 >781     ............................................................ 840    

AC204663.4 >87243   cggttaagtaagttgtgcaatgagccaagttcaaaatcctttgaaaacatcttggagaac 87302  
AC205491.4 >841     ............................................................ 900    

AC204663.4 >87303   atttttccagatcatgaatgcccttgagaaaaacaaattttacttcccacaaagactcca 87362  
AC205491.4 >901     ............................................................ 960    

AC204663.4 >87363   cttttgttctcttcaaaatactcaaaattt-ggtttcagccctgaaaactggttcaaccg 87421  
AC205491.4 >961     ..............................g............................. 1020   

AC204663.4 >87422   atcctaaaaccggttcaaccggttttgggactattcccctgccatctctgctctgacctg 87481  
AC205491.4 >1021    ............................................................ 1080   

AC204663.4 >87482   tctgacagtcagagctgtcagtaaagtcgctgcagatattttttgaaaaccggttgagcc 87541  
AC205491.4 >1081    ............................................................ 1140   

AC204663.4 >87542   gaaatttttccttactcagccggttttgaaaccggtcgagtctccagctgagtagctcag 87601  
AC205491.4 >1141    ............................................................ 1200   

AC204663.4 >87602   tggaccgggatccccctggtagaaaccggttcaaccggtctgaaaaccggttcaaccggt 87661  
AC205491.4 >1201    ............................................................ 1260   

AC204663.4 >87662   ttttacttcttttctcccaacggctgccagcttttgggggatcctttatataccccctca 87721  
AC205491.4 >1261    ............................................................ 1320   

AC204663.4 >87722   cactctctctctcatttactcctgcctctcccatgaattcctggctgaccaaccttcaaa 87781  
AC205491.4 >1321    ............................................................ 1380   

AC204663.4 >87782   caagcgcattcatttcacctttcacaccctcaatcgcatctccttcaatcatttgaagga 87841  
AC205491.4 >1381    ............................................................ 1440   

AC204663.4 >87842   cccttggtgtgaggtgaactcgatcgaacacgctgtcaatttcatctcgattctcccatt 87901  
AC205491.4 >1441    ............................................................ 1500   

AC204663.4 >87902   ctctttgttcttgagctcgttgcaaacttaaccttgtgcggatttgttactcttggaacc 87961  
AC205491.4 >1501    ............................................................ 1560   

AC204663.4 >87962   tcgtgttccttgacggttagaggttgcttgggagtctccaaatttgtggacgaccccaag 88021  
AC205491.4 >1561    ............................................................ 1620   

AC204663.4 >88022   aagtttgtatcacccgctctttgagctgatttgagaagagattgccttgacctttgtggt 88081  
AC205491.4 >1621    ............................................................ 1680   

AC204663.4 >88082   cggcttgtggaggattagggttggaaaagagccggccctttgtgggttcctcaacgagga 88141  
AC205491.4 >1681    ............................................................ 1740   

AC204663.4 >88142   gtaggacacctttgtggtggttgccgaacctcgggttatattgcgtgttcttgtgtgttc 88201  
AC205491.4 >1741    ............................................................ 1800   

AC204663.4 >88202   ttgtcaagcgctttaaattcattggttggttcatattatccactcgagtagattttgtgt 88261  
AC205491.4 >1801    ............................................................ 1860   

AC204663.4 >88262   agggcaagtctttagttatattcttcactacttcgtatttgtttaacagattatctaatt 88321  
AC205491.4 >1861    ............................................................ 1920   

AC204663.4 >88322   taagttgagcaggttcaaacttgttcagttgtaattaaaatcgactgaaccggtttgcac 88381  
AC205491.4 >1921    ............................................................ 1980   

AC204663.4 >88382   cagtgcaactttaatttaacctatctcgaagtttttagtgaaaattttcaggtgtagcct 88441  
AC205491.4 >1981    ..........................................................a. 2040   

AC204663.4 >88442   attcacccccctctaggctactttcaattccagattgtaatcttgatttctttccaactt 88501  
AC205491.4 >2041    ............................................................ 2100   

AC204663.4 >88502   accggacgtagatagcacatgatctccttgattgttggtgctgatatcgcttgtgatacg 88561  
AC205491.4 >2101    ............................................................ 2160   

AC204663.4 >88562   acagcctctgttagcctccggttaaagtttggtacgatgtaacaacctccgctgctttgt 88621  
AC205491.4 >2161    ............................................................ 2220   

AC204663.4 >88622   cagcctatataaatacatatacgtggctgctcaagggcagtagagaacgtttcctaattc 88681  
AC205491.4 >2221    ............................................................ 2280   

AC204663.4 >88682   cttcatggtataagagccagtgttttttttcgtgagaggtctccacagagtctctcatgg 88741  
AC205491.4 >2281    ............................................................ 2340   

AC204663.4 >88742   tgatgcagtcatcgttgtctacctccgccatccccacctcctttgccatacctgtcagtg 88801  
AC205491.4 >2341    ............................................................ 2400   

AC204663.4 >88802   aaaagctcacaaagggcaactatcttctctggaaggcgcaggtcctgccggccatccgtg 88861  
AC205491.4 >2401    ............................................................ 2460   

AC204663.4 >88862   ccgctcagcttgatgacatcttgactggcatcgagatctgtccacccaagaccatatcag 88921  
AC205491.4 >2461    ............................................................ 2520   

AC204663.4 >88922   atgcaagtgacaggactgtcacggtggcccaatctggcctatggtcgatggattgctcgc 88981  
AC205491.4 >2521    ...........................-................................ 2579   

AC204663.4 >88982   aatcaagcagtccttggctatttgctctcatcgctttcacacgaggtgctgagtagcctc 89041  
AC205491.4 >2580    ............................................................ 2639   

AC204663.4 >89042   atcaattgttccacgtcgtcctccgtatggacaactctatccgagatgtattcttcgcac 89101  
AC205491.4 >2640    ............................................................ 2699   

AC204663.4 >89102   tcgcgcgcccgcaaggtcaatacgcagatcgcgctggccaaaaccaagaaaggtgcttcg 89161  
AC205491.4 >2700    ............................................................ 2759   

AC204663.4 >89162   tcggtggccgaatactttgcaaagatgcgtggctttgctgatgaacttggtgctgcgggt 89221  
AC205491.4 >2760    ............................................................ 2819   

AC204663.4 >89222   aaaccccttgatgacgaggagttcgtgtcttttctgttgaccggacttgatgaagatttc 89281  
AC205491.4 >2820    ............................................................ 2879   

AC204663.4 >89282   aatccactagtcactgctgtggtggctcgttcagatctaattactccaggtgatctgtat 89341  
AC205491.4 >2880    ............................................................ 2939   

AC204663.4 >89342   acacaactccttagttacgagaacaggatgcatctccagaccggttcatcctcgcttatg 89401  
AC205491.4 >2940    ............................................................ 2999   

AC204663.4 >89402   cagtcttcggcaaatgcggcgtcttgcggacgcggcatgtcttgggggcgctctggtggc 89461  
AC205491.4 >3000    ............................................................ 3059   

AC204663.4 >89462   cgtggcttctctcgtggccgaggccgcggcaggggtccctctcggggtggttttcagtcg 89521  
AC205491.4 >3060    ............................................................ 3119   

AC204663.4 >89522   tccgggcgaggcaacaattcttctggcgctacagatgcagatacctcctcaaggccacga 89581  
AC205491.4 >3120    ............................................................ 3179   

AC204663.4 >89582   tgccaagtttgctcaagagttggccatacggccctaaattgctggtacaggttcgatgag 89641  
AC205491.4 >3180    ............................................................ 3239   

AC204663.4 >89642   aattatgtgccggatcagcgctcggcgaattcttccgctcatcaaaattgctccaatgtt 89701  
AC205491.4 >3240    ............................................................ 3299   

AC204663.4 >89702   ccttggtacacggacatcggagcgacggatcatatcacaggagatctggatcgtttgacg 89761  
AC205491.4 >3300    ............................................................ 3359   

AC204663.4 >89762   atgcatgacaagtacctcggcactgatcagatcattgctgccaatggtacaggtatgact 89821  
AC205491.4 >3360    ............................................................ 3419   

AC204663.4 >89822   attagcaatattggtaatgcaattgttcccacatcatcccgttcattgcatttacgttct 89881  
AC205491.4 >3420    ............................................................ 3479   

AC204663.4 >89882   gttcttcatgtttcatccacccacaagaatctcaaatcggttcatagacttaccaatgat 89941  
AC205491.4 >3480    ............................................................ 3539   

AC204663.4 >89942   aacgatgtgtttattgaattccattcatctcattttcttattaaggatcggcaaacgaag 90001  
AC205491.4 >3540    ............................................................ 3599   

AC204663.4 >90002   gccgtactgctccatggcaaatgtagagacgacctctacccactaccgccacatcctgat 90061  
AC205491.4 >3600    ............................................................ 3659   

AC204663.4 >90062   cttcggttgaagcacaattttagttctactcgtgtccctttggagcattggcacaagcgt 90121  
AC205491.4 >3660    ............................................................ 3719   

AC204663.4 >90122   cttggacacccgtctcgtgatattgttcatcgtgtcattagcaataataattttccatgt 90181  
AC205491.4 >3720    ............................................................ 3779   

AC204663.4 >90182   cttagtaataattccacaacttcagtttgtgatgcatgtttacaagccaaggcacatcag 90241  
AC205491.4 >3780    ............................................................ 3839   

AC204663.4 >90242   ttgccttatactatttccatgagtcaatctagtgcacctctcatgcttcttttttcagat 90301  
AC205491.4 >3840    ............................................................ 3899   

AC204663.4 >90302   gtgtttggtccaacaattgattcctttggtcgctataaatactacgtgagtttcatcaat 90361  
AC205491.4 >3900    ............................................................ 3959   

AC204663.4 >90362   gattacagtaaattcacctggatttaccttcttcatcacaaatctgatgtttacaagtcc 90421  
AC205491.4 >3960    ............................................................ 4019   

AC204663.4 >90422   ttttgtgaatttcagcacttagtagaacggatgtttggtcgcaaaatcattgcctttcag 90481  
AC205491.4 >4020    ............................................................ 4079   

AC204663.4 >90482   tcagattggggcggcgagtatgaaaaactcaatgcccacttcaaaactgtcggcatccac 90541  
AC205491.4 >4080    ............................................................ 4139   

AC204663.4 >90542   caccaagtgtcgtgtcctcacacccaccagcagaatggtgcagccgaacgaaagcaccgt 90601  
AC205491.4 >4140    ............................................................ 4199   

AC204663.4 >90602   cacattgtcgaggttgggcttgccctcctttctcaatcatctatgccgctcaagtattgg 90661  
AC205491.4 >4200    ............................................................ 4259   

AC204663.4 >90662   gatcatgctttcttggctgctgtttatttgataaaccgcacaccatccaaaactattgcc 90721  
AC205491.4 >4260    ............................................................ 4319   

AC204663.4 >90722   cacgacactcccttgcacaagttgacaggtgccactccggattactcctcacttcgtatt 90781  
AC205491.4 >4320    ............................................................ 4379   

AC204663.4 >90782   ttcgggtgtgcatgctggccaaacttgcgcccatataaccaccataagctccaatttagg 90841  
AC205491.4 >4380    ............................................................ 4439   

AC204663.4 >90842   tctacccggtgtgctttcttagggtatagtaacatgcataaaggattcaagtgcctggat 90901  
AC205491.4 >4440    ............................................................ 4499   

AC204663.4 >90902   atttcaaccgggcgaatctatatttcatgcgacgttgtttttgatgagcatgtttttcca 90961  
AC205491.4 >4500    ............................................................ 4559   

AC204663.4 >90962   tttgcctctcttaataaaaatgctagggtcaaatacacatccgaagttctccttttgcca 91021  
AC205491.4 >4560    ............................................................ 4619   

AC204663.4 >91022   catgactcttgtgggaataatatgcttactgatcatgctaataatctgcctggttccagt 91081  
AC205491.4 >4620    ............................................................ 4679   

AC204663.4 >91082   tcaccgctcccctttcttgcgcagcattttttgcagggcaattccaaagttcccacatca 91141  
AC205491.4 >4680    ............................................................ 4739   

AC204663.4 >91142   aataatacagccatggtgctgcccgcttccggaccgaatgaagttttcgtgccccctgca 91201  
AC205491.4 >4740    ............................................................ 4799   

AC204663.4 >91202   ctggtcccgtcgtcactagtccctgcagcatcacctgcaccaacaggtgtgtcggccaat 91261  
AC205491.4 >4800    ............................................................ 4859   

AC204663.4 >91262   gcggaaccagcacctgaggccgactcgctgtcgtctggtccccctgtcgcaacagaaaat 91321  
AC205491.4 >4860    ............................................................ 4919   

AC204663.4 >91322   gcgacgggtgttcccgatgcggatccgctcctgcaggctcccggatcgtctgtggctcac 91381  
AC205491.4 >4920    ............................................................ 4979   

AC204663.4 >91382   cagactcctgattcggcgccattatctgctgctgcgccgcgcacccacttgcaacaggga 91441  
AC205491.4 >4980    ............................................................ 5039   

AC204663.4 >91442   attagcaagccgaaacagttcactgatggaactgttcgatatggtaatgctgcagctcgt 91501  
AC205491.4 >5040    ............................................................ 5099   

AC204663.4 >91502   attactgaaccatcttccgtctccgaagcccttgctgatccacagtggcgagctgctatg 91561  
AC205491.4 >5100    ............................................................ 5159   

AC204663.4 >91562   gaggctgaaggcgctacagaagaataacacttggacattggtgcccccggaccgcactcg 91621  
AC205491.4 >5160    ............................................................ 5219   

AC204663.4 >91622   aaatctcatcgactctaagtgggttttcaaagttaaatataatgctaacggttccattga 91681  
AC205491.4 >5220    ............................................................ 5279   

AC204663.4 >91682   caggctcaaggctcgtctggttgctaagggaattaagcaacaatatggcattgattacga 91741  
AC205491.4 >5280    ............................................................ 5339   

AC204663.4 >91742   tgatacgttcagccctgtcgtcaagcactctactattcgtctcgtgctttccttagcagt 91801  
AC205491.4 >5340    ............................................................ 5399   

AC204663.4 >91802   ttctcagaaatggagtcttcgtcagctggacgtgcaaaatgctttcctgcatggaattct 91861  
AC205491.4 >5400    ............................................................ 5459   

AC204663.4 >91862   tgaagaaactgtttatatgaaacaacctccaggttttgctaacacaactcatcctaatta 91921  
AC205491.4 >5460    ............................................................ 5519   

AC204663.4 >91922   tcactgtcatctgcagaaatcgttgtatgggctgaaacaagctccgagagcttggtattc 91981  
AC205491.4 >5520    ............................................................ 5579   

AC204663.4 >91982   tcggttgagtgagaagcttcaaagcttgggattcgtaccttctaaagctgatgtttctct 92041  
AC205491.4 >5580    ............................................................ 5639   

AC204663.4 >92042   ctttatttgcaatgcacattccactgctatctatattttggtgtatgttgatgacattat 92101  
AC205491.4 >5640    ............................................................ 5699   

AC204663.4 >92102   cattacaggatcctctccgcacgccattgataatgttcttgccaagctcaaggatgattt 92161  
AC205491.4 >5700    ............................................................ 5759   

AC204663.4 >92162   tgccattaaggatctaggtgatctccactattttcttggtattgaagttcacagaaaggg 92221  
AC205491.4 >5760    ............................................................ 5819   

AC204663.4 >92222   tgacggtctccttctatgtcaagaaaaatatgctcgtgatctcttgaaacgggtcggcat 92281  
AC205491.4 >5820    ............................................................ 5879   

AC204663.4 >92282   ggaatgttgcaaaccagttcatactcctgttgccacaagtgaaaagctctcggcgtctgc 92341  
AC205491.4 >5880    ............................................................ 5939   

AC204663.4 >92342   tggtaccttgctttctcctgaagagactacaaaatatcggagtgttgttggtgcattgca 92401  
AC205491.4 >5940    ............................................................ 5999   

AC204663.4 >92402   gtatctaacactcactcgacctgatctctcttatgcaatcaatagagtttgccagttcct 92461  
AC205491.4 >6000    ............................................................ 6059   

AC204663.4 >92462   tcacgccccgaccgaccttcactggacagtagttaagcgtattcttcgcaatatacaaca 92521  
AC205491.4 >6060    ............................................................ 6119   

AC204663.4 >92522   tactattagcctcggtctcactatcagaccatctccgtccctaatgctaagtgcattctc 92581  
AC205491.4 >6120    ............................................................ 6179   

AC204663.4 >92582   agatgcggactgggccggttgccctgatgacaggaagtctacaggcgggtatgcgctctt 92641  
AC205491.4 >6180    ............................................................ 6239   

AC204663.4 >92642   ccttggtcctaatttgatctcctggaactctaagaaacaaagcacggtgtcacgatcaag 92701  
AC205491.4 >6240    ............................................................ 6299   

AC204663.4 >92702   cacagaagctgaatataaggccatggccaatgcgactgccgaagttatctggcttcagtc 92761  
AC205491.4 >6300    ............................................................ 6359   

AC204663.4 >92762   ccttctccacgagcttggtattcggctcaccggtattcctcgcctctggtgcgataatct 92821  
AC205491.4 >6360    ............................................................ 6419   

AC204663.4 >92822   gggtgctacatacttgtcttccaagctaatttttaatgctcgcacgaagcacattgaagt 92881  
AC205491.4 >6420    ............................................................ 6479   

AC204663.4 >92882   cgacttccattttgttcgtgacagagtgctcagcaagaacctggatattcgactgatatc 92941  
AC205491.4 >6480    ............................................................ 6539   

AC204663.4 >92942   tactaatgatcaagtggtggacggtttcacaaaagctctcactattggacggctaaacga 93001  
AC205491.4 >6540    ............................................................ 6599   

AC204663.4 >93002   gtttagacgcaatctcaacctcgatcggttgtgattgaggggggatattagacagatata 93061  
AC205491.4 >6600    ............................................................ 6659   

AC204663.4 >93062   ttccagattgtaatcttgatttctttccaactaaccggacgtagatagcataggatctcc 93121  
AC205491.4 >6660    ............................................................ 6719   

AC204663.4 >93122   ttgattgttggcgctgatatcgcttgtgatacggcagcctctgttagcctctggttaatg 93181  
AC205491.4 >6720    ............................................................ 6779   

AC204663.4 >93182   tttggtacgatgtaacaccctccgctgctttgtcagcctatataaatacatatacgcggc 93241  
AC205491.4 >6780    ............................................................ 6839   

AC204663.4 >93242   tgctcaagggcagtaaagaacgcttcctaattccttcaatgtcgacctcaacaaaggagg 93301  
AC205491.4 >6840    ............................................................ 6899   

AC204663.4 >93302   taagtccgttgatcaaaaggcataccggtctatgatagggtctttactttatttatgtgc 93361  
AC205491.4 >6900    ............................................................ 6959   

AC204663.4 >93362   tagtagaccggatattatgcttagcatatgcatgtgtgctagatttcaatccaacccaag 93421  
AC205491.4 >6960    ............................................................ 7019   

AC204663.4 >93422   ggagtgtcaccttgtggccgttaagcgaattcttagatatttagttgctacgccttgctt 93481  
AC205491.4 >7020    ............................................................ 7079   

AC204663.4 >93482   cgggatctggtatccaaaagggtcaacctttgacttgattggatactcagactccgatta 93541  
AC205491.4 >7080    ............................................................ 7139   

AC204663.4 >93542   tgctggatgcaaggttaataggaagagtacatcagggacgtgccaattcctagggaggtc 93601  
AC205491.4 >7140    ............................................................ 7199   

AC204663.4 >93602   cctggtgtcttggagttctaagaaacagactttcgttgccctatccaccgctgaggccga 93661  
AC205491.4 >7200    ............................................................ 7259   

AC204663.4 >93662   gtacgttgccgcaggtcagtgttgcgcgcaactactttggatgaggcaaaccctcaggga 93721  
AC205491.4 >7260    ............................................................ 7319   

AC204663.4 >93722   ctttggctacaatctgagcaaagtcccactcctatgtgataatgagagtgcaatccgcat 93781  
AC205491.4 >7320    ............................................................ 7379   

AC204663.4 >93782   ggcggacaatcctgttgaacacagccgcacaaagcacattgacatccggcatcacttttt 93841  
AC205491.4 >7380    ............................................................ 7439   

AC204663.4 >93842   gagagaccaccagcaaaagggagatatcgaagtgtttgatgttagcaccgagaactagct 93901  
AC205491.4 >7440    ............................................................ 7499   

AC204663.4 >93902   agccgatatctttaccaagcctttatatgagaagaccttttgcaggctgcttagtgagct 93961  
AC205491.4 >7500    ............................................................ 7559   

AC204663.4 >93962   aaatgtcttagattcacgtaacttggattgatctgtagcatacatgtgttttatgtcttt 94021  
AC205491.4 >7560    ............................................................ 7619   

AC204663.4 >94022   aatcatgttcctttatgcatattattgcttatttatggtgctcaagttgtgcaagggatc 94081  
AC205491.4 >7620    ............................................................ 7679   

AC204663.4 >94082   cccggacctcacaagcccatgtgtgaatgatgcacatatttagggggagaaatgctacaa 94141  
AC205491.4 >7680    ............................................................ 7739   

AC204663.4 >94142   cttgaccctttgagactaaccgtgtgcttgagtttacttaatttagtctcaaaggtggat 94201  
AC205491.4 >7740    ............................................................ 7799   

AC204663.4 >94202   tgaaagggaaaggtgaacttggaccatgcaagacttccactgcactccgatgaaagggta 94261  
AC205491.4 >7800    ............................................................ 7859   

AC204663.4 >94262   atttactccaagttcatctccatgctcttattgccttttttactcttcattgacgttttt 94321  
AC205491.4 >7860    ............................................................ 7919   

AC204663.4 >94322   tgtggtgaggcaatggggtttaagggccaataatgatcccgttttggtgcttaatgccaa 94381  
AC205491.4 >7920    ............................................................ 7979   

AC204663.4 >94382   agggggagaaattaaggccaaagcaaatggatcagctaccacttgagaactttgaaaata 94441  
AC205491.4 >7980    ............................................................ 8039   

AC204663.4 >94442   gtagagttagaatttttgatttgtcaaaatactcttgatgtgcaaagtttggtctcttgt 94501  
AC205491.4 >8040    ............................................................ 8099   

AC204663.4 >94502   ggggagaatatttgattatgggaaaagggggagtttttggctcttgatcaattttctctt 94561  
AC205491.4 >8100    ............................................................ 8159   

AC204663.4 >94562   ggaatatctctctttatgcctaaacaagtgtgtttaacttagaaataggaaaatgagtat 94621  
AC205491.4 >8160    ............................................................ 8219   

AC204663.4 >94622   gattcaaaaacaaaccaagtggtggcaaagaatgatccaaatatgccaaatttgaataaa 94681  
AC205491.4 >8220    ............................................................ 8279   

AC204663.4 >94682   aaacaatctttgttctcaagtatatggatgttgcacttctattggttgctttttgatggt 94741  
AC205491.4 >8280    ............................................................ 8339   

AC204663.4 >94742   tggcataaatcaccaaaaagggggagattgaaagggaaatgtgcccttgggccatttcta 94801  
AC205491.4 >8340    ............................................................ 8399   

AC204663.4 >94802   gtatattttggtgattaagtgctcaacacatattgagtgagtaattatgtgccaaatgat 94861  
AC205491.4 >8400    ............................................................ 8459   

AC204663.4 >94862   gaatgaagtgcaaagcaacaagaaggtaagattctagacttagtacattggtttttgtgt 94921  
AC205491.4 >8460    ............................................................ 8519   

AC204663.4 >94922   actaatatatttgtctaagtgctagaatcagagaaaagagaaaaaggaacagacttggct 94981  
AC205491.4 >8520    ............................................................ 8579   

AC204663.4 >94982   ggagtagccaaaattcagcgcactctggcacaccggactgtccggtggtgcaccggactg 95041  
AC205491.4 >8580    ............................................................ 8639   

AC204663.4 >95042   tccgatgagccaacggccgccagcacaacggtcggccgccaaatccgtgggtgatgcgtg 95101  
AC205491.4 >8640    ............................................................ 8699   

AC204663.4 >95102   gctcgctccaacggtcggcaggaggcaccagactgtccggtgcgccaacggctacaactc 95161  
AC205491.4 >8700    ............................................................ 8759   

AC204663.4 >95162   tacaacggtcggctgtgccattttaggaaggcgatctgcaccggaccatgaacagtacct 95221  
AC205491.4 >8760    ............................................................ 8819   

AC204663.4 >95222   gtccggtggtgcaccggactgtccggtgcgccacccgacagaaggaaagaattgccttcc 95281  
AC205491.4 >8820    ............................................................ 8879   

AC204663.4 >95282   cagattacctccaatggctcctagctgccttggggctataaaagaggcccctaggcgcat 95341  
AC205491.4 >8880    ............................................................ 8939   

AC204663.4 >95342   ggaggagatacccaagcattccttgatcaatcctaagcaccaagactccattctcgcgca 95401  
AC205491.4 >8940    ............................................................ 8999   

AC204663.4 >95402   tttgattctttgagatagtgacttgagccccatttgagtagagaactccttgagttgtgt 95461  
AC205491.4 >9000    ............................................................ 9059   

AC204663.4 >95462   tgtgagctcaagttgtggctttgtgtgcgtgattgtgctcttgttttgagtcttgtgtgt 95521  
AC205491.4 >9060    ............................................................ 9119   

AC204663.4 >95522   gttgctctcccctcccttacttatgtgcttctttgtgatcatcaattgtaagggcgagag 95581  
AC205491.4 >9120    ............................................................ 9179   

AC204663.4 >95582   gctcaaagttgtggagattcctcgcaaatgggagaaagtataagaaaggaaaacaccatg 95641  
AC205491.4 >9180    ............................................................ 9239   

AC204663.4 >95642   gtattcaagctgatcaatggatcacttgaaaggggttgagtgcaaccctcgtccattggg 95701  
AC205491.4 >9240    ............................................................ 9299   

AC204663.4 >95702   acgccacaacgtggagtaggcaagtgttatacttggtcgaaccacgggataaattaccgt 95761  
AC205491.4 >9300    ............................................................ 9359   

AC204663.4 >95762   gtcttttgtgttgcttttctctgtgatcattgtgtttcacaaaagctcggtccttagcca 95821  
AC205491.4 >9360    ............................................................ 9419   

AC204663.4 >95822   cttggtcctattgcactaactcttaaccaagttttgtggctacaagtatttgatttttac 95881  
AC205491.4 >9420    ............................................................ 9479   

AC204663.4 >95882   aggatcacctattcaccccccccccctctaggtgctctcaatattggaccgttcactatc 95941  
AC205491.4 >9480    ............................................................ 9539   

AC204663.4 >95942   ttggcccgggtgggcaacttggcttatcgcttgcaattgtcggattccatggcaggggta 96001  
AC205491.4 >9540    ............................................................ 9599   

AC204663.4 >96002   cacccggtttttcatgtctctatgctgaggaagttcttgcgggatctagaccattagatt 96061  
AC205491.4 >9600    ............................................................ 9659   

AC204663.4 >96062   gagatggaaccaattgctatgaagtaggatctgactttggagtgtcgtctggtgcgtaac 96121  
AC205491.4 >9660    ............................................................ 9719   

AC204663.4 >96122   ttggaatccttggagcgtgttttgaggaagagatcaattaagtatgtcaaggttttatgg 96181  
AC205491.4 >9720    ............................................................ 9779   

AC204663.4 >96182   actaatcagtctgagcgcgaggctatgtgggaacttgaggaactgatgcggcagaaatat 96241  
AC205491.4 >9780    ............................................................ 9839   

AC204663.4 >96242   ctggaactttttgttgtgggtaagtgttgttgattcattaatctttccttttgtcgttcc 96301  
AC205491.4 >9840    ............................................................ 9899   

AC204663.4 >96302   gatagaagcgtcagaatttgaggtcgaattctttttaagggggtagagtgtgatacccgg 96361  
AC205491.4 >9900    ............................................................ 9959   

AC204663.4 >96362   tttgcaaagaagagaagttggaggttattctttttgtttttttctcattcggtgatgcgc 96421  
AC205491.4 >9960    ............................................................ 10019  

AC204663.4 >96422   tttggggatttggaatttgtggaaaatattcactagtataacagtagaatggttggtcgg 96481  
AC205491.4 >10020   ............................................................ 10079  

AC204663.4 >96482   gagctgtcgtgcaagcgagttgggctgtggatctcaatccggcccattagccttcccgta 96541  
AC205491.4 >10080   ............................................................ 10139  

AC204663.4 >96542   accctagccgccccccccccctttttccccttgggattgcagccgcccccttcccctccc 96601  
AC205491.4 >10140   ............................................................ 10199  

AC204663.4 >96602   cttttcccttggacgctgccccttcccctctcccatcttcttcctcctcaaacccttgca 96661  
AC205491.4 >10200   ............................................................ 10259  

AC204663.4 >96662   gccatcaccacccaaaatcctagtcgcccccccccccccatttcccccccccctccaagg 96721  
AC205491.4 >10260   ............................................................ 10319  

AC204663.4 >96722   tgcagccctcccgcgtggttctccgtcttgtggctgcgatctcaattggagtttggaggg 96781  
AC205491.4 >10320   ............................................................ 10379  

AC204663.4 >96782   aggaagaaggaaggaggaagggaagaacacaaggtgaatttgtgattaacttttgttgtt 96841  
AC205491.4 >10380   ............................................................ 10439  

AC204663.4 >96842   tttgtgctgcaatcaatttgattatgtgtttatctatgcgaatcggtagaggggctgtcc 96901  
AC205491.4 >10440   ............................................................ 10499  

AC204663.4 >96902   agaaattttgtgagtggggcgaacagcagtagttctagtgatttctgggaatttttgtgg 96961  
AC205491.4 >10500   ...............-............................................ 10558  

AC204663.4 >96962   gttatctagtgggaatcagtgggtgaatcatgtagagctttgtcatacctttccaacgag 97021  
AC205491.4 >10559   ............................................................ 10618  

AC204663.4 >97022   tacttatgcgctctatttggaattatattttaaaagatatcgctgtttgaatccgggtat 97081  
AC205491.4 >10619   ............................................................ 10678  

AC204663.4 >97082   gtcgctgcccaaaagaaaaaaacagattacatggtttatcttgtagactgttttgggcta 97141  
AC205491.4 >10679   ............................................................ 10738  

AC204663.4 >97142   attagatgttggaatttaattataaactgtataaaaaacttgtggggaattttatgtaga 97201  
AC205491.4 >10739   ............................................................ 10798  

AC204663.4 >97202   tgcctctggagtttttgtttgttaccactgctgtcataattttaaagttatgaaattatt 97261  
AC205491.4 >10799   ............................................................ 10858  

AC204663.4 >97262   aagcagcgccgctgcagtttggtgggtgtggggagagttgttacccgcggcggggtttga 97321  
AC205491.4 >10859   ............................................................ 10918  

AC204663.4 >97322   gattgagcgtaggtgcggcgtcgtttatgagccttattatgtgaaattggtgcactaagt 97381  
AC205491.4 >10919   ............................................................ 10978  

AC204663.4 >97382   tgtgtgtcaaaaacaggtggtggacttccggatcgtacttagggatttgcccaaacttcc 97441  
AC205491.4 >10979   ............................................................ 11038  

AC204663.4 >97442   ggtgaaggcaagtaaaatagtgatggttatttcgtctgtcgattgaagagtcttatactt 97501  
AC205491.4 >11039   ............................................................ 11098  

AC204663.4 >97502   gattatgtttgtgctatttgtgttcgtattcatattcctaattgggtaccatcgtttgaa 97561  
AC205491.4 >11099   ............................................................ 11158  

AC204663.4 >97562   gatattcatgttttattgattacatatgttgaggttatggtttgtgtgacacccagtgtc 97621  
AC205491.4 >11159   ............................................................ 11218  

AC204663.4 >97622   acctagggtttctctcaagtgctaacccaagaaccatcattttatgtgagcaaaattgag 97681  
AC205491.4 >11219   ............................................................ 11278  

AC204663.4 >97682   catgatcatcaagttgatttaagaataaagaacccactaagcttatacttaaaagcatca 97741  
AC205491.4 >11279   ............................................................ 11338  

AC204663.4 >97742   tgatcaaaacaaatgggttttttaaaaaaaggcaaaatgtgcaaccccaacaaaaaccct 97801  
AC205491.4 >11339   ............................................................ 11398  

AC204663.4 >97802   aattgagccctatgaacaaaattcaagaaaatggggaaaagagtatgaaaaatttagaat 97861  
AC205491.4 >11399   ............................................................ 11458  

AC204663.4 >97862   catggcttgggccaattataaacattgaagtatatttaataagcaacaataaagattgag 97921  
AC205491.4 >11459   ............................................................ 11518  

AC204663.4 >97922   gaagcttggccaaaacaaattaaataaaactctaaacaagactctcaagtgggatttcat 97981  
AC205491.4 >11519   ............................................................ 11578  

AC204663.4 >97982   tagggaattctgaaattcagaattctgaatttcaaaccttgagccaaagatcaagcgtgt 98041  
AC205491.4 >11579   ............................................................ 11638  

AC204663.4 >98042   tcaccttgatccctaactcaaatcctaatggccccattgacaaaatcgtgcataactaac 98101  
AC205491.4 >11639   ............................................................ 11698  

AC204663.4 >98102   ctctctgtcttgtgccagaagatggcattgggacgcgtgccttggacacgtcaaaccaga 98161  
AC205491.4 >11699   ............................................................ 11758  

AC204663.4 >98162   gatcttctccctgtgtgcggcagtgagacaaacatgatttctcccctctctatctcttaa 98221  
AC205491.4 >11759   ............................................................ 11818  

AC204663.4 >98222   tccagtcagcaaaacctgctagcctccacacacaaacgacaaagggacctgagaggaaga 98281  
AC205491.4 >11819   ............................................................ 11878  

AC204663.4 >98282   gatctctcaacgggatcatggccataatctcaaagatttgggggccaatcggcgcttgaa 98341  
AC205491.4 >11879   ............................................................ 11938  

AC204663.4 >98342   ctcgacctctctctgcgctgcctcgtgcttgacgttgtgccagacgccagagcgcgcact 98401  
AC205491.4 >11939   ............................................................ 11998  

AC204663.4 >98402   agcgttcgccgcgcacgccccgagcgcttgtcagagccccgccctcggccgtgctcgccc 98461  
AC205491.4 >11999   ............................................................ 12058  

AC204663.4 >98462   gcgcctataaagcctccccgggcgcgcctcacttcaccccgcgctcaccaccgccggcca 98521  
AC205491.4 >12059   ............................................................ 12118  

AC204663.4 >98522   gacacccctccttagctccggcgagctcctttccgcccgccattgccgctagagcttcgg 98581  
AC205491.4 >12119   ............................................................ 12178  

AC204663.4 >98582   ccaccgtggctatttcattccagtcacccccaagtcgcaccagcgcttcagttagctccg 98641  
AC205491.4 >12179   ............gcc..c.......................................... 12238  

AC204663.4 >98642   ccataggcccgtgaagctttccaagccctcggacctggcagaacttcaccggaaggcgaa 98701  
AC205491.4 >12239   ............................................................ 12298  

AC204663.4 >98702   gatcgacctcaccggacttcggccgcccgcctacacgcgtaaaccgagcacttcggtgag 98761  
AC205491.4 >12299   ............................................................ 12358  

AC204663.4 >98762   ccactcttcaattcctcgcgcacaccccttccttgatccctggtgaagctctctgacccg 98821  
AC205491.4 >12359   ............................................................ 12418  

AC204663.4 >98822   tttgattggtcaatttcgccctggataggccggactcctcgccaccgacgagctcccccg 98881  
AC205491.4 >12419   ............................................................ 12478  

AC204663.4 >98882   cctgcgcacgcggaccggccgactccgaccatccccgacggtgacccgcatatcgtcgtg 98941  
AC205491.4 >12479   ............................................................ 12538  

AC204663.4 >98942   accctcaggacctcccctacaccctcggccacctcaccggagcaatcttgccgccggtaa 99001  
AC205491.4 >12539   ............................................................ 12598  

AC204663.4 >99002   gcccctccgccctttcttccgccacgggtactgtttaatttggggaaaggacctcgggtt 99061  
AC205491.4 >12599   ............................................................ 12658  

AC204663.4 >99062   aggattagaagaatccagagggttttctgagatgtcagtgactcatttgaatagtagccc 99121  
AC205491.4 >12659   ............................................................ 12718  

AC204663.4 >99122   agggactagtctgtaaggaaaacttaaaacacccgccagggaccccgttgcaaagtagtt 99181  
AC205491.4 >12719   ............................................................ 12778  

AC204663.4 >99182   ttccatttaatcaattctgtttaatctttttaataaacagagaacttagaaaattcataa 99241  
AC205491.4 >12779   ............................................................ 12838  

AC204663.4 >99242   cttgatgaattcttaaccaaaagttgtcaaactaattttgctagatcctgaataatatga 99301  
AC205491.4 >12839   ............................................................ 12898  

AC204663.4 >99302   actatcatttaaaaataataaacccttatgctttctgttccaatttttaaagtttaaaat 99361  
AC205491.4 >12899   ............................................................ 12958  

AC204663.4 >99362   taaaaatagaaactgaccaaaccttgtttaaataaggaaaattagttttgcttctgtgat 99421  
AC205491.4 >12959   ............................................................ 13018  

AC204663.4 >99422   gaatctaagaaaaattgtagatgttcaaaccccatttaagcactgtttaaaaatagaaag 99481  
AC205491.4 >13019   ............................................................ 13078  

AC204663.4 >99482   aaccccagtattgaaaaatgtagtgtagatatccattaaaagccatttcttcccaaaact 99541  
AC205491.4 >13079   ............................................................ 13138  

AC204663.4 >99542   taagaaaatcagaaaggcattagaaattaatgaacagtgagtgaaattatttttcctagt 99601  
AC205491.4 >13139   ............................................................ 13198  

AC204663.4 >99602   ttgcttaagtaacagagaacctaggaaaaataaagggacccctagtccagatcagtttta 99661  
AC205491.4 >13199   ............................................................ 13258  

AC204663.4 >99662   aagtgaaatgttttattcagcattattccaactagaaatcaattattagaattaaaaaac 99721  
AC205491.4 >13259   ............................................................ 13318  

AC204663.4 >99722   aagacccaaaattgataataaaaatccagtggacttgtaactaccaaaaccccactataa 99781  
AC205491.4 >13319   ............................................................ 13378  

AC204663.4 >99782   aaataataaacaccccagcccatcattttaagtagggtaaataaatataatatgataatg 99841  
AC205491.4 >13379   ............................................................ 13438  

AC204663.4 >99842   agtcatattccaaataaatcatgaataacccataataatgcaataatgggcaaataaaat 99901  
AC205491.4 >13439   ............................................................ 13498  

AC204663.4 >99902   tttgctaggtcaataatgagaaaggccaccagagaaaaatgcaaacccattagaaggatg 99961  
AC205491.4 >13499   ............................................................ 13558  

AC204663.4 >99962   caaattaatacctattgctaatattttataagaaaggccatttaatccaattaatgcata 100021 
AC205491.4 >13559   ............................................................ 13618  

AC204663.4 >100022  ccaccccttcccttaagcaaaaagatgccaaacttcagaatgattgctcttgcgcaaaat 100081 
AC205491.4 >13619   ............................................................ 13678  

AC204663.4 >100082  agaagctaggaaaaatcagaaatctgttgtttgatatttttcaaatatagtggtagtaga 100141 
AC205491.4 >13679   ............................................................ 13738  

AC204663.4 >100142  aagcaccccttttgctagaaactttagaaaatcctagtaaaataactaataagtattaat 100201 
AC205491.4 >13739   ............................................................ 13798  

AC204663.4 >100202  ggctagaattttgtgccaagtcatgttataacacctaaatgccagcaaaaataagtttta 100261 
AC205491.4 >13799   ............................................................ 13858  

AC204663.4 >100262  gagaattacccactattatatggtagttgtagttcaaatcaccccctctgccctaaaaat 100321 
AC205491.4 >13859   ......................................................-..... 13917  

AC204663.4 >100322  ttggtaattttgtccagagaaagctattcactttctgatccccaaattttgagacagaga 100381 
AC205491.4 >13918   ............................................................ 13977  

AC204663.4 >100382  actacaccagtaataagccactgtaatttttacagaatttttgaaaatttattaaggcaa 100441 
AC205491.4 >13978   ............................................................ 14037  

AC204663.4 >100442  cttgtagttcaaacccaccctaaaaccctaaagaagatcaagagaaaaagaaagaagaaa 100501 
AC205491.4 >14038   ............................................................ 14097  

AC204663.4 >100502  taaacctcactccaataagtccaacttgaattcttgtcaattctcactaagattttaaaa 100561 
AC205491.4 >14098   ............................................................ 14157  

AC204663.4 >100562  agaattcagtggaaccccaaaaataaacctaccacttaccttagctaagtttgatccaat 100621 
AC205491.4 >14158   ............................................................ 14217  

AC204663.4 >100622  ttaccaagtataccacccaaaagtctcgtgtaagtaaggtttagctctatctaactcaag 100681 
AC205491.4 >14218   ............................................................ 14277  

AC204663.4 >100682  tagatcatacaccatcaaaagtttaaattactaaagcacatatcatatcatgcatctatc 100741 
AC205491.4 >14278   ............................................................ 14337  

AC204663.4 >100742  ttacgcattgcattcattagattgtaatctcgccgacggagagtacgtgctcatccccga 100801 
AC205491.4 >14338   ............................................................ 14397  

AC204663.4 >100802  gcaaggaactgtccaagaggaggaccaggagcaagcttccgaggctgctatcgaggatct 100861 
AC205491.4 >14398   ............................................................ 14457  

AC204663.4 >100862  ccctgcagccccagctattgaaggcaagccccggtttatatgcataatcgtattattata 100921 
AC205491.4 >14458   ............................................................ 14517  

AC204663.4 >100922  tgctactttactacacttaatgcttgtaggattgtaatgtgcacttaagtgtaggagttg 100981 
AC205491.4 >14518   ............................................................ 14577  

AC204663.4 >100982  cttgaaacctctagttgcatgaacttaggattcctttttgagatgaatactagtatgcta 101041 
AC205491.4 >14578   ............................................................ 14637  

AC204663.4 >101042  ggtcgagtagctgcttgctaatcaggatctcggtagaagtcgagtgattttcctagcact 101101 
AC205491.4 >14638   ............................................................ 14697  

AC204663.4 >101102  cgcgcgaggtcaggaattgattgtattcatcttgataacgggatctatgttagtctatgg 101161 
AC205491.4 >14698   ............................................................ 14757  

AC204663.4 >101162  acttggatccagggaggatgccttgaccatgagacgggaaaaaggaattaaggattaatg 101221 
AC205491.4 >14758   ............................................................ 14817  

AC204663.4 >101222  tgtggatacctgagtcaagcatttgaacgtactaagcacatgtcgggaaaaatggtaacc 101281 
AC205491.4 >14818   ............................................................ 14877  

AC204663.4 >101282  gataaacctagtacctgagtgaagccgggcgcggactttatccctcatgcgacctgagac 101341 
AC205491.4 >14878   ............................................................ 14937  

AC204663.4 >101342  tgggtctcccatgctagctatggtgggtacaagtgcggtcactgcacggcggcagccggg 101401 
AC205491.4 >14938   ............................................................ 14997  

AC204663.4 >101402  gtcagtggagcattgtatgccaaggcggtgaggtctggacgcgaacggggaatcgatggg 101461 
AC205491.4 >14998   ............................................................ 15057  

AC204663.4 >101462  gacggttgacatgtgtggggtcggagtgccctgacatgtcgtgtgtttaggtttaccttg 101521 
AC205491.4 >15058   ............................................................ 15117  

AC204663.4 >101522  caaggataaaactcgattcgaatcgtctgcttctcgcagctaatgagactgcttgacccc 101581 
AC205491.4 >15118   ............................................................ 15177  

AC204663.4 >101582  ttgtactgcattgagtaagaagtgaaatgaggttacatgagacaatttgttgattgaagt 101641 
AC205491.4 >15178   ..........................................................c. 15237  

AC204663.4 >101642  aaatgcttgttaccaagtatgcttagaaggagcaaacctagctaaaataatgatactaga 101701 
AC205491.4 >15238   ...............t............................................ 15297  

AC204663.4 >101702  atctgaaaagctaagaaatgattttagaaacagctagtgcttttggcaaaccaaacccct 101761 
AC205491.4 >15298   .................t.......................................... 15357  

AC204663.4 >101762  cagccaaacagctgtatagtctagaggtagaggagtagtttcctcacaccgggtaagtct 101821 
AC205491.4 >15358   ............................................................ 15417  

AC204663.4 >101822  agctgagtattagtatactcagccttgcttgtggcataatttttgcaggtgcgattcagg 101881 
AC205491.4 >15418   ............................................................ 15477  

AC204663.4 >101882  aaatggttgatggtgtgacttggcctaccaccctgccaccgggttggacggtcgagtggg 101941 
AC205491.4 >15478   ............................................................ 15537  

AC204663.4 >101942  atgttgctctggcaggagaggagcaggaggagtagtgggctaggccttgcccatttcctc 102001 
AC205491.4 >15538   ............................................................ 15597  

AC204663.4 >102002  attaccgacgacatcgattatccgctgcattttattttgagaactcttaattgctactca 102061 
AC205491.4 >15598   ............................................................ 15657  

AC204663.4 >102062  aaaacttcgatctatgtaataattcagcacttaatttgaggttcctgttttattgtattt 102121 
AC205491.4 >15658   ............................................................ 15717  

AC204663.4 >102122  cttctgtgactcaccttcgagtgggattgtggaatttaatcctggttaagtggctctatc 102181 
AC205491.4 >15718   ............................................................ 15777  

AC204663.4 >102182  agactagatctgaaggactgacgggttattccgatttaagtgtgttgcggtccctgaggc 102241 
AC205491.4 >15778   ............................................................ 15837  

AC204663.4 >102242  gtgacttaggcacttaagctggaataattcgggtggttctgccacattttgatcatgtta 102301 
AC205491.4 >15838   ............................................................ 15897  

AC204663.4 >102302  cccatgtggtttattatgtggaatgggtggaagtatatgtctagcacattttatttggga 102361 
AC205491.4 >15898   ............................................................ 15957  

AC204663.4 >102362  agaactcatgttgttgacatgcataatgcattcaccatccattgcatggaagtttcgccg 102421 
AC205491.4 >15958   ............................................................ 16017  

AC204663.4 >102422  cgatcttatggtccgaccgtaccggtagaatgagcatcatatgttgcccgagaaggggta 102481 
AC205491.4 >16018   ............................................................ 16077  

AC204663.4 >102482  tgatgcagcttcatatccttagaggtatgaaggcagatgtcattactgcatctgtagcca 102541 
AC205491.4 >16078   ............................................................ 16137  

AC204663.4 >102542  tgtgcattcatgggagaagtgtgaaacctattatgtggatgtggatagtgtggatcttta 102601 
AC205491.4 >16138   ............................................................ 16197  

AC204663.4 >102602  cattgtgattcatcttggcattaagtaattggttacttgcttacttgttgcaaattaata 102661 
AC205491.4 >16198   ............................................................ 16257  

AC204663.4 >102662  ttcaagaaggaagttatgaactacgtgtttgtttaagcacggttagtttacattgtccaa 102721 
AC205491.4 >16258   ............................................................ 16317  

AC204663.4 >102722  ttgttgtttgctctttttacttgctgagatgtgtcatctcactcttgcattgtctgatgc 102781 
AC205491.4 >16318   ............................................................ 16377  

AC204663.4 >102782  aggcacctgatatctgctttgggaaagaggggatgtagcagcatggccactacaccttta 102841 
AC205491.4 >16378   ............................................................ 16437  

AC204663.4 >102842  aataagggaaccactgcttaataatgttgttaaacatggagggtcaagtctagggaatta 102901 
AC205491.4 >16438   ............................................................ 16497  

AC204663.4 >102902  taatgttctagcctttcatggtagttgagctgattttgtggtggactaagttacctatct 102961 
AC205491.4 >16498   ............................................................ 16557  

AC204663.4 >102962  ttatttggtcttgaatgttcattactacttttgcattttgattatactacgtgaattatc 103021 
AC205491.4 >16558   ............................................................ 16617  

AC204663.4 >103022  tttcttttataccctgtataaactctatgtttccccttgttatgcttctttcaaaggagg 103081 
AC205491.4 >16618   ............................................................ 16677  

AC204663.4 >103082  tgctgccagattttgcaatactttctttctctatttcttttcttgtgttgcataagctta 103141 
AC205491.4 >16678   ............................................................ 16737  

AC204663.4 >103142  gtgggaagggtatttggtaacatccattgtgtgggatcagtggggtgttacaatgtgcta 103201 
AC205491.4 >16738   ............................................................ 16797  

AC204663.4 >103202  tttcttctgactgtccaatatgctttatcgaatgatctgccagttttgatcgggtggagg 103261 
AC205491.4 >16798   ............................................................ 16857  

AC204663.4 >103262  ttgatctccaacgggctttgtttgtttcttcatcggttctagacctctggtgtcgcagga 103321 
AC205491.4 >16858   ............................................................ 16917  

AC204663.4 >103322  gttggttgcggatgagatagtggcgcttttttacattaacattgaagatatcacagttca 103381 
AC205491.4 >16918   ............................................................ 16977  

AC204663.4 >103382  tctatcctcgccgaaagtttcatgatgttgtttcctagtgaagaagtggatctacaagtt 103441 
AC205491.4 >16978   ............................................................ 17037  

AC204663.4 >103442  ctcaatggcggtgtggtgttcagcatgccatccttttctctaaagttcaagcgttggtcg 103501 
AC205491.4 >17038   ............................................................ 17097  

AC204663.4 >103502  aggtttgcccatgcggatgcttcatcccttcagtgcaaggtctcggtgcttttttagggg 103561 
AC205491.4 >17098   ............................................................ 17157  

AC204663.4 >103562  attccactccacgcattggagctggccatttctcagcgtttgtttaatggcttctgttcc 103621 
AC205491.4 >17158   ............................................................ 17217  

AC204663.4 >103622  tatgtggagcttcaccggatacggttgctcatcatgatatgtcctctttcagagtggaag 103681 
AC205491.4 >17218   ............................................................ 17277  

AC204663.4 >103682  cttggtgtcggcggccagagctcatcccgacagattttgatctacagattcctaaaccgc 103741 
AC205491.4 >17278   ............................................................ 17337  

AC204663.4 >103742  tcatcgtcgaccctaatgcccccacatccgacgtctacatttgtaccatatagttgtatt 103801 
AC205491.4 >17338   ............................................................ 17397  

AC204663.4 >103802  cgtctctctgatctctcc-cctcgaggtcagatgatgctctgtcctcattcactt-tagt 103859 
AC205491.4 >17398   ..................a.........................-........c.c.... 17456  

AC204663.4 >103860  gtctgatgatgatcgagagggtggaccgtgatgtttccaccccgtgcttcttcttcggta 103919 
AC205491.4 >17457   ......................................................c..... 17516  

AC204663.4 >103920  gaaatgggcgggtccgacgaagtccaaccagctgagacagcccat 103964 
AC205491.4 >17517   ..g..............................-........... 17560

Events

Type

Date

Whodid

Comment

296502

InitHasAlign

01/15/2014 17:44:39

cgi_chen

find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Aug  1 2013. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 545267543
Info: Running Blast Filter: 0
Info: Determined ID: gi|545267543 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545267543 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545267543 needs Merging.
Info: Best Rank: 1 in  for 545267543 of 1
Info:  NG returned 1 alignments

tpf_solo for TPF_updated_1_v2

381752

CreateSwitchPt

12/19/2014 16:00:14

chenhc

tpf_m_BuilderId: t Toolkit wrapper version: built Nov 13 2014 using /home/boukn/code/toolkit/c++/GCC481-ReleaseMT64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH201-168L17	AC204663.4	98.76%	pos 5770 (R-)
CH201-247B24	AC205491.4	99.69%	pos 107817 (R-)
CH201-297A6	AC205491.4	100%	pos 50 (R+)
CH201-297A6	AC204663.4	100%	pos 86452 (R+)
CH201-319D11	AC204663.4	100%	pos 86437 (R+)
	AC205491.4	100%	pos 146 (R+)
	AC204663.4	100%	pos 86429 (R+)
	AC204663.4	100%	pos 86548 (R+)
	AC205491.4	100%	pos 35 (R+)
	AC205491.4	100%	pos 27 (R+)
CH201-330L6	AC204663.4	100%	pos 40444 (R-)
CH201-338D9				AC205491.4	99.5%	pos 83617 (F-)
CH201-34K16	AC205491.4	100%	pos 85799 (R+)
CH201-34K16	AC205491.4	100%	pos 85750 (R+)
CH201-350C8	AC205491.4	99.55%	pos 90637 (R-)
CH201-354P23	AC204663.4	99.21%	pos 9240 (R-)
CH201-512G10	AC205491.4	100%	pos 35710 (R+)
CH201-528H22	AC205491.4	100%	pos 60585 (R-)
CH201-573E19				AC204663.4	100%	pos 400 (F-)
CH201-99M22	AC204663.4	99.85%	pos 42921 (R-)
ZMMBBb-145I24	AC205491.4	99.68%	pos 159816 (R+)
ZMMBBb-166D7	AC205491.4	99.74%	pos 19116 (R-)
ZMMBBb-180M4				AC205491.4	99.2%	pos 139092 (F-)
ZMMBBb-212P9	AC204663.4	99.41%	pos 27641 (R+)	AC205491.4	99.79%	pos 34349 (F+)
ZMMBBb-286O24				AC205491.4	97.01%	pos 34359 (F+)
ZMMBBb-298O12				AC204663.4	100%	pos 97239 (F-)
ZMMBBb-298O12				AC205491.4	100%	pos 10836 (F-)
ZMMBBb-432K18				AC205491.4	98.43%	pos 33492 (F+)
ZMMBBb-533C24	AC205491.4	97.66%	pos 109176 (R+)
ZMMBBb-540H24	AC204663.4	97.57%	pos 606 (R+)	AC205491.4	99.39%	pos 43837 (F+)
ZMMBBb-579K6				AC205491.4	98.78%	pos 34335 (F+)
ZMMBBb-582J4	AC204663.4	98.84%	pos 27678 (R+)
ZMMBBb-584C8				AC204663.4	99.85%	pos 7 (F+)
ZMMBBb-584C8				AC204663.4	98.85%	pos 7 (F+)
ZMMBBb-630M13				AC205491.4	99.48%	pos 36838 (F+)
ZMMBBb-641N9	AC205491.4	98.04%	pos 34289 (R+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
Z_AI-1083J5				AC205491.4	98.86%	pos 62884 (F+)
Z_AI-1151O23	AC205491.4	99.85%	pos 86166 (R+)
Z_AI-1277B13				AC204663.4	99.61%	pos 46527 (F+)
Z_AI-1288J11				AC204663.4	99.86%	pos 67420 (F-)
Z_AI-1296K18	AC205491.4	99.71%	pos 32802 (R-)
Z_AI-1306A13	AC205491.4	99.87%	pos 62279 (R+)
Z_AI-1378A17	AC205491.4	100%	pos 85420 (R-)
Z_AI-1425P6	AC205491.4	100%	pos 2465 (R-)
Z_AI-1425P6	AC204663.4	100%	pos 88866 (R-)
Z_AI-1429O9				AC204663.4	99.03%	pos 7510 (F+)
Z_AI-1450H19				AC205491.4	100%	pos 109127 (F+)
Z_AI-1450J19				AC205491.4	100%	pos 109003 (F+)
Z_AI-1459H7	AC204663.4	97.85%	pos 52753 (R-)
Z_AI-24J16				AC204663.4	100%	pos 44087 (F-)
Z_AI-264D1				AC204663.4	100%	pos 46589 (F-)
Z_AI-345M11				AC205491.4	100%	pos 100360 (F+)
Z_AI-455L9				AC204663.4	100%	pos 48451 (F+)
Z_AI-511I20	AC205491.4	99.86%	pos 127329 (R+)
Z_AI-537E17	AC205491.4	99.72%	pos 142794 (R-)
Z_AI-566M8				AC205491.4	99.58%	pos 145927 (F-)
Z_AI-690N16	AC205491.4	99.7%	pos 50987 (R+)
Z_AI-690N16	AC205491.4	99.7%	pos 57473 (R+)
Z_AI-735K2	AC205491.4	100%	pos 17496 (R+)
Z_AI-781G7	AC205491.4	99.72%	pos 74140 (R+)	AC205491.4	99.82%	pos 106301 (F-)
Z_AI-810I6				AC205491.4	100%	pos 93523 (F+)
Z_AI-828E13	AC204663.4	100%	pos 89202 (R+)	AC205491.4	99.43%	pos 55418 (F+)
Z_AI-828E13	AC205491.4	100%	pos 2800 (R+)
Z_AI-925D7	AC205491.4	100%	pos 144647 (R-)	AC205491.4	100%	pos 107930 (F+)
Z_AI-948E8	AC204663.4	97.78%	pos 36833 (R-)
Z_AI-948O18	AC205491.4	99.29%	pos 73372 (R-)
Z_AI-988F12	AC205491.4	99.86%	pos 86164 (R+)

Repeats

acc	start	stop	repeat id	strand	name	family	class

Join Legend

Curator Links

Alignment for AC204663.4 and AC205491.4

Alignment Summary

Alignment 1 of 1