Alignment last updated: 12/19/2014 15:59:51

Join Legend

Serious alignment problem, requires review. (details...)
- Zero, or more than one, overlaps
- Half dove-tail >50 bp
- Alignment identity <98%
- Alignment length <50 bp
- >2 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Minor alignment problem. (details...)
- Exactly one overlap
- Half dove-tail >0 bp and <=50bp
- Alignment identity <99.6%
- Alignment length <2000 bp
- >0 gaps, each gap >25 bp, not marked as an SSR
- >0 gaps, each gap >50 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, not marked as an SSR
- >0 gaps, each gap >500 bp, marked as an SSR
Excellent alignment, meets all defined criteria. (details...)
- Exactly one RuleInfo
- Half dove-tail <=0 bp
- Alignment identity >=99.6%
- Alignment length >=2000 bp
- <=0 gaps, each gap >25 bp, not marked as an SSR
- <=0 gaps, each gap >50 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, not marked as an SSR
- <=0 gaps, each gap >500 bp, marked as an SSR
Certificate submitted, not yet approved.
Certificate submitted and approved.
Valid, contained clone
Join not evaluated due to one accession not being finished.

Alignment for AC195310.4 and AC186651.4

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AC195310.4 Zea mays chromosome 1 clone CH201-455E22, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces [htgs_limited_order]

Length: 233,780 bp

AC186651.4 Zea mays chromosome 1 clone CH201-455A6, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces [htgs_limited_order]

Length: 173,450 bp

Alignment Summary

Join evaluation: green

Alignment count: 1

Go to Endhit Table

Alignment 1
Align ID: 116652
Total Length: 14950
Aligned Length: 14948
Percent Identity: 100
Number of Gaps: 2
Number of Mismatches: 0
Source: CtgOverlap Seq-Align
Valid Switchpoint: true (A)

Switch Points

Type	Point1	Point2	Orient1	Orient2	Curator	Comment	Time	Id	Alignment	Releases
A	233780	14951	+	+	chenhc	Taxid 4577 chrom 1 Primary assembly	2014-12-19 15:59:51.760	120840	116652

Alignment 1 of 1

 AC195310.4 : + : 218833..233780
 AC186651.4 : + : 1..14950
 Mismatches = 0, Gaps = 2, Length = 14950
 Percent identity = 100%
 Score = 2.76e+04 bits (14943), Expect = 0
  2 BAC and 1 Fosmid bridging clones.
  2 BAC and 0 Fosmid concordant clones.
  0 BAC and 1 Fosmid discordant clones.

AC195310.4 >218833  gatctgcaataactcgaaattcagccagggcaacttggctcgaactccctggtgtcatgt 218892 
AC186651.4 >1       ............................................................ 60     

AC195310.4 >218893  cgcaccggggtctggtctcttcgaaggtcaattctaacggactctgcactagcttctcct 218952 
AC186651.4 >61      ............................................................ 120    

AC195310.4 >218953  tctcttcgtcaactttgacgtagaaccacttagacttccagccagctgtccacttgcttc 219012 
AC186651.4 >121     ............................................................ 180    

AC195310.4 >219013  gatagctaattactggaaattttgtattcttgcgataggcaaagttgtagcagccaaaat 219072 
AC186651.4 >181     ............................................................ 240    

AC195310.4 >219073  tttcatgtagcccatgtcctctagccttcgtctgatagtgcagctcgtgtactcggcaga 219132 
AC186651.4 >241     ............................................................ 300    

AC195310.4 >219133  agcctacaccaaatggctccaccccttggcttcggagagcctagatataaacactaaacc 219192 
AC186651.4 >301     ............................................................ 360    

AC195310.4 >219193  taacgatagcattaggagttagctgatgaaggtagatcccaaacttattcagtacatcag 219252 
AC186651.4 >361     ............................................................ 420    

AC195310.4 >219253  caatcatcttgtttaaggggaatctcaaaccagccttaaagaagcttttaaagaccacta 219312 
AC186651.4 >421     ............................................................ 480    

AC195310.4 >219313  cttcatcctttcctggcttcggagtagtctcttccccaccaaaacgaatcagctctttct 219372 
AC186651.4 >481     ............................................................ 540    

AC195310.4 >219373  ttgcttcattaaaatagcccaaattcaacagcttaggcaaatcatcttcggagatggtgg 219432 
AC186651.4 >541     ............................................................ 600    

AC195310.4 >219433  atttcccgaagtccagatggctgggtttacttggcactgcgctataatcatcttcagact 219492 
AC186651.4 >601     ............................................................ 660    

AC195310.4 >219493  cagtctcctcaatgttagcttgctctgtttcagtggcaggtgcttccaccgatgctacca 219552 
AC186651.4 >661     ............................................................ 720    

AC195310.4 >219553  gccctgagcgcttcatcacttcggagattgggacagtctctgcaccttcggcttcctctc 219612 
AC186651.4 >721     ............................................................ 780    

AC195310.4 >219613  cgtcgcgtgtaaccgtagctgtggaacgcactctggccatccgatgattgaatttcttgt 219672 
AC186651.4 >781     ............................................................ 840    

AC195310.4 >219673  tttttgaatgaagttgaaaattttcctttactttgccgaagctctttcttgttacgaagc 219732 
AC186651.4 >841     ............................................................ 900    

AC195310.4 >219733  ttaagcaaagaaaatagcttcggttgaggatgcagcaaacaagcttcgactttggtcaat 219792 
AC186651.4 >901     ............................................................ 960    

AC195310.4 >219793  attttggcagcaaaacagtgcaatagcaatgaatgatgtggtaacttcacacctacccgt 219852 
AC186651.4 >961     ............................................................ 1020   

AC195310.4 >219853  ctgtttatatagtgccgcaggtgggaaggtgaatcgtcaaggtcttccgcaccgaacaaa 219912 
AC186651.4 >1021    ............................................................ 1080   

AC195310.4 >219913  cagtcacccgcactcactgaacggtgggccacaaggtccgagaaggtgaatcgccagggc 219972 
AC186651.4 >1081    ............................................................ 1140   

AC195310.4 >219973  gcgcgtaactgctacaaaatggggccacctcgcgcgcggattattttaatcgtttctcgc 220032 
AC186651.4 >1141    ............................................................ 1200   

AC195310.4 >220033  caacgagctcaaggaaggtgtttttcggatcttcggcatcccgaagcctagaagactttt 220092 
AC186651.4 >1201    ............................................................ 1260   

AC195310.4 >220093  tcacggatcaagctcgttacaaaaaacgatctagcaccgcgaaagggctactgttggggg 220152 
AC186651.4 >1261    ............................................................ 1320   

AC195310.4 >220153  tatgcttcgtagccgaagatccaaaagaaagagaataccttcggcagatcctatcaggag 220212 
AC186651.4 >1321    ............................................................ 1380   

AC195310.4 >220213  cagcgccgaagctatcacctataaatcttcggcacagtgacagatctcaagacgaagggg 220272 
AC186651.4 >1381    ............................................................ 1440   

AC195310.4 >220273  tgaaccgacttaaagatgaaatgacttaaagacccatgatgttttgtgtcattattgtaa 220332 
AC186651.4 >1441    ............................................................ 1500   

AC195310.4 >220333  tcgattctaaagggcgtagatgtaattttacacaggctgcgccctgtgcctataaatagg 220392 
AC186651.4 >1501    ............................................................ 1560   

AC195310.4 >220393  tgaacagtacccctgtactgttcacgcaatcttgtaatcgccgacgcattacgctggaat 220452 
AC186651.4 >1561    ............................................................ 1620   

AC195310.4 >220453  tattgctttctactaagacgaaggtataaatgtacttaaatattatgttttaatatttag 220512 
AC186651.4 >1621    ............................................................ 1680   

AC195310.4 >220513  gttcatataataaaatgtgcgaattatattatctatttttggtacatctttctataatgt 220572 
AC186651.4 >1681    ............................................................ 1740   

AC195310.4 >220573  tatatattttatatttcattttacattgtcttataagtcggatcacgaaggtgtgacctt 220632 
AC186651.4 >1741    ............................................................ 1800   

AC195310.4 >220633  cgtggtatttttactcaaggccttcgtccgaagttcattaaatccttggggagataatgc 220692 
AC186651.4 >1801    ............................................................ 1860   

AC195310.4 >220693  ttcagcggacgaaggacattaacatttaacattttatgttgccttgttcttaattcgaag 220752 
AC186651.4 >1861    ............................................................ 1920   

AC195310.4 >220753  catttgagaacaagtccccaacatccatgatagtttgtgtcatgtttatagttatttatc 220812 
AC186651.4 >1921    ............................................................ 1980   

AC195310.4 >220813  aagggcatgaatgtaatttcgaccgggctgcgtcccgtgcctataaatagatgaacagta 220872 
AC186651.4 >1981    ............................................................ 2040   

AC195310.4 >220873  atcccgtactgttcacgctgacttgtattcactcgcacgccatacttggattttcgcctt 220932 
AC186651.4 >2041    ............................................................ 2100   

AC195310.4 >220933  ctgttaagccgaaggtataaatgtaattcaatattgttcatgttcattcatgatgattta 220992 
AC186651.4 >2101    ............................................................ 2160   

AC195310.4 >220993  ataatgaaatattaatgatgtcatatgattattcatgttattccctatgtttcatatgct 221052 
AC186651.4 >2161    ............................................................ 2220   

AC195310.4 >221053  tctacttccattattatacactgtgatgatgaaggtacgtccttcataaccttcgtctga 221112 
AC186651.4 >2221    ............................................................ 2280   

AC195310.4 >221113  agatcattatatcctaagggaaataatgttttgaaggacgaagggtcgtaaccactaatg 221172 
AC186651.4 >2281    ............................................................ 2340   

AC195310.4 >221173  ttttgtgttgccttgttcttaactcatagcatttgagaacaagtccccaacattggcgcc 221232 
AC186651.4 >2341    ............................................................ 2400   

AC195310.4 >221233  cacctccggtgaactcacttccactgtggagatgatggcttcgtccaacaaccaagctat 221292 
AC186651.4 >2401    ............................................................ 2460   

AC195310.4 >221293  agcaccttcggctacgaagctggtgctcccaatcacgggtggttcaagtgcagagccagc 221352 
AC186651.4 >2461    ............................................................ 2520   

AC195310.4 >221353  caacaagaagcagaagaaggaagcatagaaaagagtgcagcatgttggggtgcaaggacc 221412 
AC186651.4 >2521    ............................................................ 2580   

AC195310.4 >221413  cttcatcaggtccaagtggtcccacatcccaatcaccatctcccaggaggatcttcagct 221472 
AC186651.4 >2581    ............................................................ 2640   

AC195310.4 >221473  aaaggactatccccacaatgatgctatggtcatatcatgtgtcatcaagggatttctggt 221532 
AC186651.4 >2641    ............................................................ 2700   

AC195310.4 >221533  ccacaatattctggttgacatagacagtgcagcggatattatatttgcaaaggcttttag 221592 
AC186651.4 >2701    ............................................................ 2760   

AC195310.4 >221593  gcagatgcaagaactagaggacaagattcatgatgctacacaccccctttgtggcttcgg 221652 
AC186651.4 >2761    ............................................................ 2820   

AC195310.4 >221653  agaacggcagattgtggcacttggcaaaatcacaatgtcagtcaccttcggttatgtcca 221712 
AC186651.4 >2821    ............................................................ 2880   

AC195310.4 >221713  caacacaagaactgagcaagttgtttttgacattatcgacatggaatacccgtacaatgc 221772 
AC186651.4 >2881    ............................................................ 2940   

AC195310.4 >221773  aattattggtcgagggacactcaataccttcgaagcaatacttcatccagcatacttatg 221832 
AC186651.4 >2941    ............................................................ 3000   

AC195310.4 >221833  catgaagatacctttggagcaagggcccattcctgtccatggaagtcaagaagctgctag 221892 
AC186651.4 >3001    ............................................................ 3060   

AC195310.4 >221893  aagggctgaaggaagttggacagattcaaaggcaatacacaacatagatggagccaaagc 221952 
AC186651.4 >3061    ............................................................ 3120   

AC195310.4 >221953  ctgtcaacaatataaacataaaagagagaaggctacttcggcagatcagtcaaagcctat 222012 
AC186651.4 >3121    ............................................................ 3180   

AC195310.4 >222013  gcttttatgtgaggatatagcatatcaaagggtactgctgggtctcagttatctgatgaa 222072 
AC186651.4 >3181    ............................................................ 3240   

AC195310.4 >222073  cagaaaaaactttgataagatttttgttcaacaacaaagatgtcttcgtttgtacaacca 222132 
AC186651.4 >3241    ............................................................ 3300   

AC195310.4 >222133  atgatctctgtggtgtcaacagagatgtcatcgagcattcacttaatgtggatccatctt 222192 
AC186651.4 >3301    ............................................................ 3360   

AC195310.4 >222193  tcaagccaaggaagcaaagacttcggaagatgtctaatgataaagctgaaggtgctcaga 222252 
AC186651.4 >3361    ............................................................ 3420   

AC195310.4 >222253  acgaagtaaagagacttctcagcgctggtgttctcagagaagtaacatatccagagtggc 222312 
AC186651.4 >3421    ............................................................ 3480   

AC195310.4 >222313  tagccaacactgttatggtgaaaaaggctaatggcaaatggagaatgtgtattgatttca 222372 
AC186651.4 >3481    ............................................................ 3540   

AC195310.4 >222373  cagatctcaacaaggcatgcccaaaggacgagttcccattgccgaggatagactcccttg 222432 
AC186651.4 >3541    ............................................................ 3600   

AC195310.4 >222433  tagatgcagcagcttcttcggagctcatgagtctactggactgctattcaggctatcatc 222492 
AC186651.4 >3601    ............................................................ 3660   

AC195310.4 >222493  aaatttggatgaagaaggaagatgagccaaagaccagcttcataactcgtagtggtacct 222552 
AC186651.4 >3661    ............................................................ 3720   

AC195310.4 >222553  attgctaccttcagatgcctgaggggctcaagaatgctagaggaagcttcagcagaatga 222612 
AC186651.4 >3721    ............................................................ 3780   

AC195310.4 >222613  cagccaaggtccttcactctcaaataggcaggaatgtgctgacttatgttgatgatatca 222672 
AC186651.4 >3781    ............................................................ 3840   

AC195310.4 >222673  tagtaaagagcacaaaacaagagaatcacattgctgacttgcaagaaacatttgccaact 222732 
AC186651.4 >3841    ............................................................ 3900   

AC195310.4 >222733  tcagacaaactggtttgaaattaaatctagaaaagtgtgttttggagtgaagaagggcaa 222792 
AC186651.4 >3901    ............................................................ 3960   

AC195310.4 >222793  gttccttggctgcatggtatcaacgaagggaatcagagctaacccaaataagatcgaagc 222852 
AC186651.4 >3961    ............................................................ 4020   

AC195310.4 >222853  tatccttcggatggaacctccaaatacaaagaagggggcccaacgattggcaggaaggct 222912 
AC186651.4 >4021    ............................................................ 4080   

AC195310.4 >222913  gacatcattaaatagatttatatccagatcagcagaaagaaatctgccattctttgagat 222972 
AC186651.4 >4081    ............................................................ 4140   

AC195310.4 >222973  actgaagtcagctgaagtttttcaatggggtccggctcagcaaaagctttcgaagagtta 223032 
AC186651.4 >4141    ............................................................ 4200   

AC195310.4 >223033  aagcaatacttgatcgacttgacaacattaactccaccttcgccagaggctccattgctc 223092 
AC186651.4 >4201    ............................................................ 4260   

AC195310.4 >223093  ttatatgtatcagcttctcactctgcagtcagtgcagcgcttgtacaagagaagcaagat 223152 
AC186651.4 >4261    ............................................................ 4320   

AC195310.4 >223153  ggcgaggtcaaaaaacaagcaccagtatattttgcctctgaagttttaagcttatcaaag 223212 
AC186651.4 >4321    ............................................................ 4380   

AC195310.4 >223213  aaaaaatatataaaactggagaaggtactatatgctgtgttgatggcctccaagaagctt 223272 
AC186651.4 >4381    ............................................................ 4440   

AC195310.4 >223273  cggcactattttcaagcatatcatataattgttccttcgtcacaacctctgaaggacata 223332 
AC186651.4 >4441    ............................................................ 4500   

AC195310.4 >223333  atgagaaatagagaagctactgggaggatcggaaaatgggctgccaagctcaatgaattt 223392 
AC186651.4 >4501    ............................................................ 4560   

AC195310.4 >223393  tctattgattatgttcatagatcctcaattcagtctcaggccttagcagacttcattgct 223452 
AC186651.4 >4561    ............................................................ 4620   

AC195310.4 >223453  gattggacgccaggggctcaaggataagaagcaacaaaagatgtcgaagcctggacggtc 223512 
AC186651.4 >4621    ............................................................ 4680   

AC195310.4 >223513  ttctgtgatggttcttggggaaacttcggcgcaggagcggctgctgttctagtagcgtct 223572 
AC186651.4 >4681    ............................................................ 4740   

AC195310.4 >223573  tccaaagtcagaacatgctatgcagcaaggctagattttagttgtacaaataacattgct 223632 
AC186651.4 >4741    ............................................................ 4800   

AC195310.4 >223633  gaatacaaagcccttctgttgggcttcggaagctaaaagcaatgggaataagaagggcaa 223692 
AC186651.4 >4801    ............................................................ 4860   

AC195310.4 >223693  tcctcaaaactgactcccaagtcatatctggccatgtagacaaaagcagcaaggcaaggg 223752 
AC186651.4 >4861    ............................................................ 4920   

AC195310.4 >223753  atccgaagcttgaaaatatttggacacagtccgaaggttggaggcttccttcgaaggttt 223812 
AC186651.4 >4921    ............................................................ 4980   

AC195310.4 >223813  ttctgtcaaaaatattccaagagaggaaaatgagcatgtagatttgttagccaagtcagc 223872 
AC186651.4 >4981    ............................................................ 5040   

AC195310.4 >223873  agcacaggggctccctctaccttcggaagtattctttgaaacaataaaagcaccttcggt 223932 
AC186651.4 >5041    ............................................................ 5100   

AC195310.4 >223933  cgaacttctcgaaagagcagtgcttgcaatatcacttatgcatagtgaagattggaggac 223992 
AC186651.4 >5101    ............................................................ 5160   

AC195310.4 >223993  taaaatcatatcttttctccagggtaactgcctctcggatgacgaagtttataataaaag 224052 
AC186651.4 >5161    ............................................................ 5220   

AC195310.4 >224053  aatggaagcaagaacaagaccatatgtcataatagaaggggaattatacaaacatgaagt 224112 
AC186651.4 >5221    ............................................................ 5280   

AC195310.4 >224113  cttctccccacttctcaaatgtctatccagaaccaaaggtatagagctaatgaaagaaat 224172 
AC186651.4 >5281    ............................................................ 5340   

AC195310.4 >224173  acatgcaggattgtgtggatctcacattggatctagacatttgatgggaaaggtttttag 224232 
AC186651.4 >5341    ............................................................ 5400   

AC195310.4 >224233  acaaggattttattggtcgggggcaacttcggatgcagcagatttggttcaaaatgcgaa 224292 
AC186651.4 >5401    ............................................................ 5460   

AC195310.4 >224293  aattgtcaaaaatatgcaagagaccaaaaacaaccttcgtcgttaactcagttgatacaa 224352 
AC186651.4 >5461    ............................................................ 5520   

AC195310.4 >224353  ccaacctggccgttgcaaagatggggcctggatttgttgggtccactcccaccagctcaa 224412 
AC186651.4 >5521    ............................................................ 5580   

AC195310.4 >224413  ggtaacttgaagtatgttgtagtagcagtagaatatttttccaagtggattgaggcgaag 224472 
AC186651.4 >5581    ............................................................ 5640   

AC195310.4 >224473  cccttagctacaataacttcggccacggtccaaaaattcttttggcacaatattgtttgt 224532 
AC186651.4 >5641    ............................................................ 5700   

AC195310.4 >224533  cgcttcggtgtgccgaaggcaataactgtggacaacgatacacaatttgatgccgaagca 224592 
AC186651.4 >5701    ............................................................ 5760   

AC195310.4 >224593  ttcaaagatttttgtgaccaaattggtacgaagattcattttgcatcagttagacatcta 224652 
AC186651.4 >5761    ............................................................ 5820   

AC195310.4 >224653  gaatcgaatgatctggtagaaagagcaaatggtattataatgacaggaataatgaagcta 224712 
AC186651.4 >5821    ............................................................ 5880   

AC195310.4 >224713  accttcaactagctagagaaaagtggccagacgagctgattaaagtggtgtggagcaaca 224772 
AC186651.4 >5881    ............................................................ 5940   

AC195310.4 >224773  atacaactgcgtcaaggtcaacaagatttacacccttcaaactcttgttcggtgacgaag 224832 
AC186651.4 >5941    ............................................................ 6000   

AC195310.4 >224833  caataactccagaagaggcaaagatagggtcaataagaacaacaacttcggtagaggatg 224892 
AC186651.4 >6001    ............................................................ 6060   

AC195310.4 >224893  aagctaattatcaagtaacaaaagatactatagaagggaccagacttcaggctatagagc 224952 
AC186651.4 >6061    ............................................................ 6120   

AC195310.4 >224953  acatcaataaatatcaggccgaaacaataaagtggcgtgatagaaaagttcgattgaaaa 225012 
AC186651.4 >6121    ............................................................ 6180   

AC195310.4 >225013  acatcaagccaggccatttggtggttcggagagtggccaacccagacatagtgggcaagt 225072 
AC186651.4 >6181    ............................................................ 6240   

AC195310.4 >225073  tgcaactaaagtgggaagatccttttttggtagtatcttcgtcaagacccggttcttaca 225132 
AC186651.4 >6241    ............................................................ 6300   

AC195310.4 >225133  gattgaaggatatgaacggcaacgacatacccagatcttggaatgcggatgagcttcaac 225192 
AC186651.4 >6301    ............................................................ 6360   

AC195310.4 >225193  gatattatgtgtaatttgatgtaatttttctcagatcttggaatgcggatgagcttcgac 225252 
AC186651.4 >6361    ............................................................ 6420   

AC195310.4 >225253  gatatcatgtgtaatttgatgtaatttttctttttcattttctctatggcacccttttcc 225312 
AC186651.4 >6421    ............................................................ 6480   

AC195310.4 >225313  tttcaagaggagagaaaggtttttaatggggcctgcttcttcaccgaagatcctctaagc 225372 
AC186651.4 >6481    ............................................................ 6540   

AC195310.4 >225373  aaaaacacctttagcaggacgacacataagcatacacagcacgaaggtacaggccgaagc 225432 
AC186651.4 >6541    ............................................................ 6600   

AC195310.4 >225433  tacgatccagggagcttcggcatagtgacatgccttgagacgaagggctgcaccgactta 225492 
AC186651.4 >6601    ............................................................ 6660   

AC195310.4 >225493  aagaggaaaagactgattagtccatgatagtttgtgtcatgtttatagttatttatcaag 225552 
AC186651.4 >6661    ............................................................ 6720   

AC195310.4 >225553  ggcatgaatgtaatttcgactgggctgcgtcccgtgcctataaatagatgaacaataatc 225612 
AC186651.4 >6721    ............................................................ 6780   

AC195310.4 >225613  tcgtagtattcacgctgacttgtattcactcgcacgccatacttggattttcgccttctg 225672 
AC186651.4 >6781    ............................................................ 6840   

AC195310.4 >225673  ttaagccgaaggtataaatgtaattcaatattgttgatgtttattcatgatgatttaata 225732 
AC186651.4 >6841    ............................................................ 6900   

AC195310.4 >225733  atgaaatattaatgatgtcatataattatttatattattttctatgtttcatatgcttct 225792 
AC186651.4 >6901    ............................................................ 6960   

AC195310.4 >225793  acttccattattatacactgtgatgataaaggtacgtccttcataaccttcgtctgaaat 225852 
AC186651.4 >6961    ............................................................ 7020   

AC195310.4 >225853  attgccttggctctctatgttttctatgttctctctcaccttattattgccttggctcgt 225912 
AC186651.4 >7021    ............................................................ 7080   

AC195310.4 >225913  cgccaccatgctaaactctgccatggatggctagcagcagtcccaagagtttagaagccc 225972 
AC186651.4 >7081    ............................................................ 7140   

AC195310.4 >225973  cgccacgattcaaaatagaggatcttctaattatatatatatatatatatatatatatga 226032 
AC186651.4 >7141    ............................................................ 7200   

AC195310.4 >226033  atattactaatacaaacacttaagatacgttggggaaatattcatatcaaacaataatta 226092 
AC186651.4 >7201    ............................................................ 7260   

AC195310.4 >226093  ataaaaatatattctagtttttgagaacgttgggaaaatattcatatcaattttttactc 226152 
AC186651.4 >7261    ............................................................ 7320   

AC195310.4 >226153  tccaaccaaacgcacatcaattttaacgccctctatatgagaaaaaaaaatctcccacac 226212 
AC186651.4 >7321    ............................................................ 7380   

AC195310.4 >226213  gttaattcgaatagagtagttctattctagtttttgagaatggagccgttctatacattc 226272 
AC186651.4 >7381    ............................................................ 7440   

AC195310.4 >226273  tctgtttggcaagcagaacgaagccactctattttttgtttgattgaaaagtagaataga 226332 
AC186651.4 >7441    ............................................................ 7500   

AC195310.4 >226333  gcggagcccctctgttctttgtttggttagagagtcatacgagtgtagagatgagaagag 226392 
AC186651.4 >7501    ............................................................ 7560   

AC195310.4 >226393  ggaggagagcactcacgtccgagagagctcgcatccgatcattttggtggagcgggagca 226452 
AC186651.4 >7561    ............................................................ 7620   

AC195310.4 >226453  ctcgaactatttatggtaaattttattatggaaactccagaagccgcttcgctccccttt 226512 
AC186651.4 >7621    ............................................................ 7680   

AC195310.4 >226513  tgttgtaaaccaagcatctaaaaaactagaatggagccgctccattcttctccactcctc 226572 
AC186651.4 >7681    ............................................................ 7740   

AC195310.4 >226573  aaccaaacacatcgtaagtggcaccgatactcattctcaaatagtttaaccattcttttt 226632 
AC186651.4 >7741    ............................................................ 7800   

AC195310.4 >226633  cctccttgtatagatagacatatacacataatactcacacttgatggtcgctatatatag 226692 
AC186651.4 >7801    ............................................................ 7860   

AC195310.4 >226693  acaaaataaatcatgaccaaaatacaaacaattgtgttgtgttgtgatgtatattgtttg 226752 
AC186651.4 >7861    ............................................................ 7920   

AC195310.4 >226753  aatttgctgttaattttatctttttatttttttgttctgaatacacttatttttggtggt 226812 
AC186651.4 >7921    ............................................................ 7980   

AC195310.4 >226813  atgattctggcccccgaaaataagcgtgtatagtattcgacagctattggtcgtcgaaaa 226872 
AC186651.4 >7981    ............................................................ 8040   

AC195310.4 >226873  tacactataatttttggaagccaaagaaaaaccagcgaaaattagttactttatttttgg 226932 
AC186651.4 >8041    ............................................................ 8100   

AC195310.4 >226933  cggctggggccacttggctaattttttggccgtcagggaccgctgaaaatagggcatatg 226992 
AC186651.4 >8101    ............................................................ 8160   

AC195310.4 >226993  cgccgaaaatagattattttcgatgacatataccctattttcgaaggtctctagcaacca 227052 
AC186651.4 >8161    ............................................................ 8220   

AC195310.4 >227053  aaaatgctccgtgttcttgtagtggaactcacgtatagagcgattacataaatgactcat 227112 
AC186651.4 >8221    ............................................................ 8280   

AC195310.4 >227113  catcgcataatgcttcgaatgatcataaagagtaagtaatattattacagaccagagtca 227172 
AC186651.4 >8281    ............................................................ 8340   

AC195310.4 >227173  tttacctcataaaaatcaaagtgcacaaaatagaaacgtagccaacgtaaataaacacgc 227232 
AC186651.4 >8341    ............................................................ 8400   

AC195310.4 >227233  catacacaactgactagagaattacactaaactagtttttggaactcattatagtctcgc 227292 
AC186651.4 >8401    ............................................................ 8460   

AC195310.4 >227293  aactcctggaagtccgccttgacaacttcttgttctcctgagaaatggttgcagtgcgga 227352 
AC186651.4 >8461    ............................................................ 8520   

AC195310.4 >227353  caacctggtgttttatgttaaagcaagagtgagtacacataaacgtactcaacaagtgtc 227412 
AC186651.4 >8521    ............................................................ 8580   

AC195310.4 >227413  ctgtttggccgaagttgactagttttatgtggagttaggctgatagcaggttgcttttta 227472 
AC186651.4 >8581    ............................................................ 8640   

AC195310.4 >227473  ctttgtcaggctttaatcattaatatatgtaacaactaaaatcttgttttggtgatttaa 227532 
AC186651.4 >8641    ............................................................ 8700   

AC195310.4 >227533  agagttctccaaagatttgagaataaaatgacttccaataatatatatctttttttgaag 227592 
AC186651.4 >8701    ............................................................ 8760   

AC195310.4 >227593  gaatactttcctaaaataaatagtaatattgaaagtgtgaccgttcaaatgttaaattta 227652 
AC186651.4 >8761    ............................................................ 8820   

AC195310.4 >227653  aaactttgaaagtgtaaattaatacttgagaatattcactaagatacttaatggtggtat 227712 
AC186651.4 >8821    ............................................................ 8880   

AC195310.4 >227713  atcagaaattgttttcctaaaattacatcttttgcaaatactaattttatattgcaaaac 227772 
AC186651.4 >8881    ............................................................ 8940   

AC195310.4 >227773  attccttgttaaatagaaaataggataataaataataaaattttgccttgcatctcatgc 227832 
AC186651.4 >8941    ............................................................ 9000   

AC195310.4 >227833  tgaaatttttgcttgtgcatttagaagttggtatttaaactttggttgaatttgaatctt 227892 
AC186651.4 >9001    ............................................................ 9060   

AC195310.4 >227893  ggtttgaaaactatgatttgaaaaatataaaacataaaaaaggaaaagtctttatttggg 227952 
AC186651.4 >9061    ............................................................ 9120   

AC195310.4 >227953  ccgaatcctagccctcggcccactcatattctcccccccccctgcgcagctgcttgggct 228012 
AC186651.4 >9121    ............................................................ 9180   

AC195310.4 >228013  gatcccatctctgcggcccacaaccctaggaatggtgccgaccagtgggccctgttgggg 228072 
AC186651.4 >9181    ............................................................ 9240   

AC195310.4 >228073  gtcttcctcttccgaaggtcctcaaaaacatgactaaccatttgcttctagcctaatatt 228132 
AC186651.4 >9241    ............................................................ 9300   

AC195310.4 >228133  gattactacatggagcttcggttcatgatggtagccttctcccatgtcgaaggtatacaa 228192 
AC186651.4 >9301    ............................................................ 9360   

AC195310.4 >228193  cacgaaggtatagcctcaggatgataagaatgaacgccgaagctatagccgtagagtaac 228252 
AC186651.4 >9361    ............................................................ 9420   

AC195310.4 >228253  agctttggcttaaattgatgatgaagaccaagcatggtgcagagctgaagaggaaaagac 228312 
AC186651.4 >9421    ............................................................ 9480   

AC195310.4 >228313  tagctagtccctaatgattcatgttacatttataaataaatattgagatcataaatgtac 228372 
AC186651.4 >9481    ............................................................ 9540   

AC195310.4 >228373  ttttacccgggctatgtcccgtgcctataaatagatgaacaatatcactgtactgttcac 228432 
AC186651.4 >9541    ............................................................ 9600   

AC195310.4 >228433  gctgaattgtaatcactctcgcatcaacaccttcgaacaagccaaaggtatctatgtaat 228492 
AC186651.4 >9601    ............................................................ 9660   

AC195310.4 >228493  gtattttgttaatgttcatgtgtgcattatgaaatacatatgtgtatgaaccaatggatt 228552 
AC186651.4 >9661    ............................................................ 9720   

AC195310.4 >228553  acattcattatctttatgtattcttattattatgaatcatgaaggcatgtccttcatgac 228612 
AC186651.4 >9721    ............................................................ 9780   

AC195310.4 >228613  cttcatctgaagattattatgtccaagaggagataatacttcggaggatgaaggtctttt 228672 
AC186651.4 >9781    ............................................................ 9840   

AC195310.4 >228673  acctttaacaattgtgttgccttgttcttgatttcaaaacatttgagaccaagtgaccaa 228732 
AC186651.4 >9841    ............................................................ 9900   

AC195310.4 >228733  cattggtgcacacctccggtgaactccaatgaccaccttcgacaagcattcaccttcgtc 228792 
AC186651.4 >9901    ............................................................ 9960   

AC195310.4 >228793  atgctgtcgaagaatacaatagtgccaggggctgcccttcagccactggaaccaaccaag 228852 
AC186651.4 >9961    ............................................................ 10020  

AC195310.4 >228853  aaggactctccctgagagaagccgaaaccagaagaggaaggctaccagcccaacaccaca 228912 
AC186651.4 >10021   ............................................................ 10080  

AC195310.4 >228913  ggaggaagaggtggaccaagagatcagagacttggaggctattcatcagcaagtgtaaag 228972 
AC186651.4 >10081   ............................................................ 10140  

AC195310.4 >228973  aaaaagagaaaaggtgcttcggctagccgaactttaaaggaagattgatgaagctgctga 229032 
AC186651.4 >10141   ............................................................ 10200  

AC195310.4 >229033  agaaatgtgtcatatcatgcaagaagaccaaggacgaaggccacaatagagagagcttcg 229092 
AC186651.4 >10201   ............................................................ 10260  

AC195310.4 >229093  ccaagaaagtccaagcaataatgacgaatggtatgatgactttcatcatggtaactttgc 229152 
AC186651.4 >10261   ............................................................ 10320  

AC195310.4 >229153  ttctttagcagtagaattgcaggctaccacatggccaccatcctacaagccaccacagct 229212 
AC186651.4 >10321   ............................................................ 10380  

AC195310.4 >229213  tcctatgtacgatggacattctgatcagaagcagtttcttatgagttacgaggcaaccat 229272 
AC186651.4 >10381   ............................................................ 10440  

AC195310.4 >229273  atcttcatatggtggcaacatggatgtcatggcgaaatccttcgtcatggcagtcaggag 229332 
AC186651.4 >10441   ............................................................ 10500  

AC195310.4 >229333  tgtggcttagacgtggtattcttcccttcgcccaagaacgatcacgtcatgacaaaagcc 229392 
AC186651.4 >10501   ............................................................ 10560  

AC195310.4 >229393  aaaagacatgctggtaaccagctttcagggtttccagacaaagccagtaactgcccaagc 229452 
AC186651.4 >10561   ............................................................ 10620  

AC195310.4 >229453  cctattccagtgcacacaataccatgaggagtacctgcaggtgtatgtccgaaggttttt 229512 
AC186651.4 >10621   ............................................................ 10680  

AC195310.4 >229513  gcgtcttagggctcaggcgccaatggtgccaaacgagattgtcatcgaagctataatcaa 229572 
AC186651.4 >10681   ............................................................ 10740  

AC195310.4 >229573  gggactccgactaggaccaacgacacaatattttgctaggaagccatcataaaccttgga 229632 
AC186651.4 >10741   ............................................................ 10800  

AC195310.4 >229633  aaagctcctccagaagatggacgaatacatcagggctgacaatgacttccgacagagaag 229692 
AC186651.4 >10801   ............................................................ 10860  

AC195310.4 >229693  ggaagagatctacaaatactcagaaatgactaggggcttcggaggaaggctccatcctag 229752 
AC186651.4 >10861   ............................................................ 10920  

AC195310.4 >229753  acatgttagaacaatccacaatcccagctcaagtgacgatagaggaaaccacgctcaagg 229812 
AC186651.4 >10921   ............................................................ 10980  

AC195310.4 >229813  acattagcaaagctcctagtcttcagggacacaacaaagttcttacaggccaccagttcc 229872 
AC186651.4 >10981   ............................................................ 11040  

AC195310.4 >229873  aagaggcagaggaggaagaagcttcggaaggaaggtttagctcccaacctagaaggttgt 229932 
AC186651.4 >11041   ............................................................ 11100  

AC195310.4 >229933  tctgtttattctgcggggaggataaaggacatacaataagggtgtgccaagtcatgatcc 229992 
AC186651.4 >11101   ............................................................ 11160  

AC195310.4 >229993  agaagcaaaaaagaaatagctaaagccaaagcgcgacagaatcagccgaagcaggtcttg 230052 
AC186651.4 >11161   ............................................................ 11220  

AC195310.4 >230053  catactgctttgtgctattctctgtacattccggagtatgtgggcaaccagcagcccaca 230112 
AC186651.4 >11221   ............................................................ 11280  

AC195310.4 >230113  acatcagttgcttcggtaagtcattctcaagctgcatgggccccgctaccaccaccatca 230172 
AC186651.4 >11281   ............................................................ 11340  

AC195310.4 >230173  catatgacaccaactttgacccacaatcagcagccagaagggcaccgccaagcacagcaa 230232 
AC186651.4 >11341   ............................................................ 11400  

AC195310.4 >230233  caacgcgacacacgtgaagaatccgaagctcgcacattcaacaacattgtgcccgagtcg 230292 
AC186651.4 >11401   ............................................................ 11460  

AC195310.4 >230293  aggcacatttactgaagttacacatgggctcaatcagaaaattttcatacctaatgaact 230352 
AC186651.4 >11461   ............................................................ 11520  

AC195310.4 >230353  ctttacttttctgtctttctatttctctcttctaaagacaatataagaaggtttaacctt 230412 
AC186651.4 >11521   ............................................................ 11580  

AC195310.4 >230413  cggcctattgtaatgaatttcgggttacaccatcaagtgtaacacgaaggttgacgaagc 230472 
AC186651.4 >11581   ............................................................ 11640  

AC195310.4 >230473  tccaaagtcattcctaaaggaatgcagagttgaaataccacctaagtaaaaggtgaagaa 230532 
AC186651.4 >11641   ............................................................ 11700  

AC195310.4 >230533  gctataaagtcgtccctaaggggatgcagagcttagctccaaagtcgttcataagggaat 230592 
AC186651.4 >11701   ............................................................ 11760  

AC195310.4 >230593  gcagagctaaaatacaacctaactaaaaggtgaagaagctccaaagtcgttcctaaggga 230652 
AC186651.4 >11761   ............................................................ 11820  

AC195310.4 >230653  atccagagctgaaataccacctaagtaaaatgtgaagagactccaaagtcattcctaagg 230712 
AC186651.4 >11821   ............................................................ 11880  

AC195310.4 >230713  gatgcaaagtcttattttttcttttatggttcgtgcataaacatcatttgcatcatatca 230772 
AC186651.4 >11881   ............................................................ 11940  

AC195310.4 >230773  tcatataatattgcataacatcgcatcatacatcattttgcatcgatagaagcagtggaa 230832 
AC186651.4 >11941   ............................................................ 12000  

AC195310.4 >230833  aagaaggaaaattgctccttcaaacataccggctaacccatgaggttagatataccttcg 230892 
AC186651.4 >12001   ............................................................ 12060  

AC195310.4 >230893  gcaaggaatcacaaaagaatgtaccaataacacaagacatgcccttggcagaagtgtttt 230952 
AC186651.4 >12061   ............................................................ 12120  

AC195310.4 >230953  tatacagggattgtaccttcgtcaatggtattcttatacaacaaccatgacgagatattc 231012 
AC186651.4 >12121   ............................................................ 12180  

AC195310.4 >231013  aatgttgcctcgacaaagaaggggaatttctttctctctttatgaagcgtgaaacggtat 231072 
AC186651.4 >12181   ............................................................ 12240  

AC195310.4 >231073  gtatgaagatttcatgcatcacaaaaaacatattacatcaaaaaataagcaaatagttga 231132 
AC186651.4 >12241   ............................................................ 12300  

AC195310.4 >231133  taaatgtttcttacaaaaacaaaactacataaaaagattcaaaactcccaatagacaagc 231192 
AC186651.4 >12301   ............................................................ 12360  

AC195310.4 >231193  tctagtcatctttcaaaaccttatcagtagcttcgcctaaaagcctgttgacagcttcat 231252 
AC186651.4 >12361   ............................................................ 12420  

AC195310.4 >231253  caacagcttcgttagcaatcctaaatatgtcaagtgcctccttcggagaaggatcaacta 231312 
AC186651.4 >12421   ............................................................ 12480  

AC195310.4 >231313  cataatcgtatggctctcgagggggagagagctcagctgcaccaaaataaaagtgtctga 231372 
AC186651.4 >12481   ............................................................ 12540  

AC195310.4 >231373  ttagtacgaagctaaaataatttacgaagctaagtcatgataaatgtacttataagtcta 231432 
AC186651.4 >12541   ............................................................ 12600  

AC195310.4 >231433  gcatgtgcagcagcttcttcagttcttctagcctcttccaaggcatcatgagattctttc 231492 
AC186651.4 >12601   ............................................................ 12660  

AC195310.4 >231493  tttttctttctaatagctacgtcagctatctctcggccacccttcagccatacttcggaa 231552 
AC186651.4 >12661   ............................................................ 12720  

AC195310.4 >231553  taaaattttccacctagtgaaatggcttcgaccgaagggtttttgatatcgttggctgag 231612 
AC186651.4 >12721   ............................................................ 12780  

AC195310.4 >231613  agcgaagaccctagttgaaccacagccttggcatgttcgcagccgaccttttccaggact 231672 
AC186651.4 >12781   ............................................................ 12840  

AC195310.4 >231673  gatacgg-ccccacgggcaccggcgaaggcacaaaaat-cccctctgtcactgaaaattt 231730 
AC186651.4 >12841   .......c..............................c..................... 12900  

AC195310.4 >231731  cttcaaaagcttcggcttcaccgttaatccactagataaccccgtcgggatcaccgcaga 231790 
AC186651.4 >12901   ............................................................ 12960  

AC195310.4 >231791  taaagttctgttctgaggaaaatgcaccaactttagaaaaactattcttcaaattcttta 231850 
AC186651.4 >12961   ............................................................ 13020  

AC195310.4 >231851  cacattctgtagcttcattgtagcactcttctttagcttcacgaaggtcttcgatatttt 231910 
AC186651.4 >13021   ............................................................ 13080  

AC195310.4 >231911  tctgtacccttaagcgttcaatatcagatatttcacgttttgttagctccacattaaaat 231970 
AC186651.4 >13081   ............................................................ 13140  

AC195310.4 >231971  tctcagtttcttcgccaaatttcttttctaattcttgaatctcagatctatgcagttttg 232030 
AC186651.4 >13141   ............................................................ 13200  

AC195310.4 >232031  cttgagtagacaacttagcttcgctgaaatgtagcctttcgaccaaagagagcaggatct 232090 
AC186651.4 >13201   ............................................................ 13260  

AC195310.4 >232091  tatcttgttcaagagcttcgttcctcaaagttataacctccgatcgaaggtttctgattg 232150 
AC186651.4 >13261   ............................................................ 13320  

AC195310.4 >232151  ccatctggtagttttcatcctccgcaaccttttgagcttttagagctttactaagaatta 232210 
AC186651.4 >13321   ............................................................ 13380  

AC195310.4 >232211  gaccctgccaaataataatagtaagaattattacaaagatagttcacgataacaaaaagt 232270 
AC186651.4 >13381   ............................................................ 13440  

AC195310.4 >232271  atcaaatgcaaagccaaaatgtataaaccttcaagctggtgtaggctaggctatccacaa 232330 
AC186651.4 >13441   ............................................................ 13500  

AC195310.4 >232331  gctgatccttcgttatcacagacagaccaagctcaagttttggatagcccttgttgtcca 232390 
AC186651.4 >13501   ............................................................ 13560  

AC195310.4 >232391  tcatctcgcagcaaatattaatctctttactgtctggcagacagtagaggaagtcatctt 232450 
AC186651.4 >13561   ............................................................ 13620  

AC195310.4 >232451  cgtcatttcctctgtatgccaaggaccctcgggggtaattcaagtccttggcatagtgtt 232510 
AC186651.4 >13621   ............................................................ 13680  

AC195310.4 >232511  gcacttcatcaatttgttctgatgataactgttttcctgaagcgtgtcgaacaatgtatt 232570 
AC186651.4 >13681   ............................................................ 13740  

AC195310.4 >232571  ctaaatcaccctggggaggtgcttcgggagaagttgacgtggacttttctagaagactct 232630 
AC186651.4 >13741   ............................................................ 13800  

AC195310.4 >232631  cttccatcagccttactcgcgcaactcccgaaggtccggcttcaacatgagcagaagcag 232690 
AC186651.4 >13801   ............................................................ 13860  

AC195310.4 >232691  cgcttgcagtaaccaatttccttgcatctccaattttcttgatagaagcttcgacagagg 232750 
AC186651.4 >13861   ............................................................ 13920  

AC195310.4 >232751  caggagttggtgttttcatcaattccaaaacagcatccaaaacactagccatcctcctct 232810 
AC186651.4 >13921   ............................................................ 13980  

AC195310.4 >232811  tcctcggggtcgttgtcgcggtagttgatagattcggtaactctgccactactggagggc 232870 
AC186651.4 >13981   ............................................................ 14040  

AC195310.4 >232871  tcaacagctttggatgttcttctaccgttttctctattttcggcacttttactgcatcag 232930 
AC186651.4 >14041   ............................................................ 14100  

AC195310.4 >232931  cactagcttcggatggcatggtaggaacttcttccatagctttggctgccatggcaggga 232990 
AC186651.4 >14101   ............................................................ 14160  

AC195310.4 >232991  caacttcggcactctcaataaacttcaccccctctatcgtgggcaccacagccgtatgtt 233050 
AC186651.4 >14161   ............................................................ 14220  

AC195310.4 >233051  ctaaagattgtagcttcagcctacgggtctggaccttggctttcttcggcttcggcgcac 233110 
AC186651.4 >14221   ............................................................ 14280  

AC195310.4 >233111  cggaagaggtcgaagtggcaatttttatttttcctccttgccttcgagcaggaaaacaat 233170 
AC186651.4 >14281   ............................................................ 14340  

AC195310.4 >233171  aatcaggaaaaacaaacccaattacatcagaaactctatttagtcttctttttcctagag 233230 
AC186651.4 >14341   ............................................................ 14400  

AC195310.4 >233231  cgccgaaggcaacggtcatggcttcgtcctctgccttcgtgtaggcttgcaacaactcat 233290 
AC186651.4 >14401   ............................................................ 14460  

AC195310.4 >233291  cactggttgcctcgatagcatctagccaatcgtcatttggctcgtcaaactggtttctgt 233350 
AC186651.4 >14461   ............................................................ 14520  

AC195310.4 >233351  actgaaaggtgtatctaagataaaccaaaccaccttggctggagccagcaacagtttgtt 233410 
AC186651.4 >14521   ............................................................ 14580  

AC195310.4 >233411  ttggcatctcccactcattcacaagaggccataccttgtaagcaatgtgttcttgtacca 233470 
AC186651.4 >14581   ............................................................ 14640  

AC195310.4 >233471  aatctctggtaccgatgtaagtgcacacggtgttgaaagccattaggcacacttgcactt 233530 
AC186651.4 >14641   ............................................................ 14700  

AC195310.4 >233531  cattcccaattgcaattgatggccttctaatgccaaagcgtgaccatatgggacactgaa 233590 
AC186651.4 >14701   ............................................................ 14760  

AC195310.4 >233591  taatgcccctcacatcctctctctcactcagatcgttgttcacatagaaacatgtaacat 233650 
AC186651.4 >14761   ............................................................ 14820  

AC195310.4 >233651  gtccggtgtgcaccggactgtctggtgagacaccccgacagtctgcgtagaggggctcgc 233710 
AC186651.4 >14821   ............................................................ 14880  

AC195310.4 >233711  agacaggcgccctcgggctgtagcaccggactgttcggtatgcaccagatagtttggcaa 233770 
AC186651.4 >14881   ............................................................ 14940  

AC195310.4 >233771  cggtcggatc 233780 
AC186651.4 >14941   .......... 14950

Events

Type

Date

Whodid

Comment

295394

InitHasAlign

01/15/2014 17:21:46

cgi_chen

find_overlapId: find_overlap_app.cpp 404199 2013-06-20 22:08:27Z rafanovi $ built Aug  1 2013. Toolkit wrapper  using /home/boukn/code/toolkit/c++/GCC442-ReleaseMT64/lib
Info: Blast Including ID: 545481169
Info: Running Blast Filter: 0
Info: Determined ID: gi|545481169 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545481169 needs Merging.
Info: Blast Warning: Empty Query Set
Info: Determined ID: gi|545481169 needs Merging.
Info: Best Rank: 0 in  for 545481169 of 1
Info:  NG returned 1 alignments

tpf_solo for TPF_updated_1_v2

381492

CreateSwitchPt

12/19/2014 15:59:51

chenhc

tpf_m_BuilderId: t Toolkit wrapper version: built Nov 13 2014 using /home/boukn/code/toolkit/c++/GCC481-ReleaseMT64/lib

BAC Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
CH201-108G20	AC195310.4	100%	pos 135591 (R-)
CH201-117B15	AC195310.4	100%	pos 52010 (R-)
	AC195310.4	100%	pos 52489 (R-)
	AC195310.4	100%	pos 52423 (R-)
CH201-124N2				AC195310.4	100%	pos 53245 (F+)
				AC195310.4	99.18%	pos 52988 (F+)
				AC195310.4	100%	pos 52930 (F+)
CH201-164H17				AC195310.4	100%	pos 52490 (F-)
CH201-164H17				AC195310.4	99.72%	pos 51980 (F-)
CH201-177J11	AC195310.4	100%	pos 52944 (R+)
CH201-177J11	AC195310.4	100%	pos 53028 (R+)
CH201-187G4	AC186651.4	99.72%	pos 167953 (R-)
CH201-187G4	AC186651.4	100%	pos 168072 (R-)
CH201-191J12	AC195310.4	100%	pos 44612 (R+)
CH201-191J22	AC195310.4	100%	pos 44576 (R+)
CH201-216L19	AC186651.4	100%	pos 30193 (R-)
CH201-21J18				AC186651.4	100%	pos 22814 (F+)
CH201-229O19	AC195310.4	99.67%	pos 131522 (R-)
CH201-229O19	AC195310.4	100%	pos 131946 (R-)
CH201-248L17				AC195310.4	100%	pos 72844 (F+)
CH201-284F13	AC195310.4	100%	pos 136701 (R+)
CH201-357L2				AC186651.4	99.69%	pos 121117 (F+)
CH201-374G24	AC195310.4	100%	pos 122932 (R-)
CH201-385I17				AC195310.4	100%	pos 128533 (F+)
CH201-385I17				AC195310.4	100%	pos 128528 (F+)
CH201-414G6				AC186651.4	99.85%	pos 12600 (F+)
CH201-414G6				AC195310.4	99.85%	pos 231432 (F+)
CH201-447I12				AC195310.4	100%	pos 38909 (F+)
CH201-455A6	AC186651.4	100%	pos 172801 (R-)	AC186651.4	100%	pos 40 (F+)
	AC186651.4	100%	pos 173047 (R-)	AC195310.4	100%	pos 219285 (F+)
				AC195310.4	100%	pos 218872 (F+)
				AC186651.4	100%	pos 453 (F+)
CH201-455E22	AC195310.4	97.57%	pos 233396 (R-)
	AC195310.4	100%	pos 233476 (R-)
	AC186651.4	99.6%	pos 14189 (R-)
	AC186651.4	97.57%	pos 14566 (R-)
	AC186651.4	100%	pos 14646 (R-)
	AC195310.4	99.6%	pos 233019 (R-)
CH201-471A10	AC186651.4	99.49%	pos 128966 (R+)
CH201-473I9				AC186651.4	100%	pos 124506 (F-)
CH201-473M11				AC186651.4	100%	pos 124616 (F-)
CH201-49K13	AC195310.4	100%	pos 136757 (R+)
CH201-508G2				AC186651.4	100%	pos 21648 (F+)
CH201-572G8	AC195310.4	99.68%	pos 60508 (R-)
CH201-572G8	AC195310.4	100%	pos 60442 (R-)
CH201-61B20	AC195310.4	100%	pos 58026 (R+)
CH201-62B2	AC195310.4	100%	pos 58101 (R+)
ZMMBBb-146E8	AC195310.4	99.34%	pos 70528 (R-)
ZMMBBb-213I20	AC186651.4	99.28%	pos 166054 (R+)
ZMMBBb-230F1				AC195310.4	99.69%	pos 147890 (F+)
ZMMBBb-236N1	AC195310.4	99.07%	pos 125882 (R+)
ZMMBBb-277G22	AC186651.4	99.51%	pos 167557 (R+)
ZMMBBb-308F22				AC186651.4	99.1%	pos 119782 (F-)
ZMMBBb-322J11				AC186651.4	97.4%	pos 169152 (F+)
ZMMBBb-340C10				AC186651.4	100%	pos 124106 (F+)
ZMMBBb-340C10				AC186651.4	99.55%	pos 124162 (F+)
ZMMBBb-347P15				AC186651.4	99.11%	pos 167622 (F+)
ZMMBBb-398I5				AC186651.4	99.29%	pos 124562 (F+)
ZMMBBb-523J24				AC195310.4	100%	pos 125601 (F-)
ZMMBBb-542N19	AC186651.4	98.41%	pos 123071 (R-)
ZMMBBb-580D23				AC195310.4	98.94%	pos 49157 (F+)
ZMMBBb-621K23	AC186651.4	98.43%	pos 120095 (R-)	AC195310.4	98.24%	pos 223267 (F+)
ZMMBBb-621K23				AC186651.4	98.24%	pos 4435 (F+)

Fosmid Ends

Clone	R			F
Clone	Accession	%id	Position (strand)	Accession	%id	Position (strand)
Z_AI-1061M2	AC186651.4	99.68%	pos 168286 (R+)
Z_AI-1088A6	AC186651.4	99.13%	pos 121314 (R-)
Z_AI-1109K1	AC195310.4	100%	pos 118320 (R+)
Z_AI-1152A23				AC195310.4	100%	pos 62934 (F+)
Z_AI-1273P15	AC195310.4	97.5%	pos 140183 (R+)
Z_AI-1283H21	AC186651.4	100%	pos 9455 (R+)
Z_AI-1283H21	AC195310.4	100%	pos 228287 (R+)
Z_AI-1301B8				AC195310.4	99.84%	pos 133120 (F+)
Z_AI-1325B2				AC195310.4	99.74%	pos 48705 (F-)
Z_AI-1344K14	AC195310.4	100%	pos 117716 (R-)
Z_AI-1367G3	AC186651.4	100%	pos 134032 (R-)
Z_AI-1375K20				AC195310.4	97.5%	pos 32559 (F-)
Z_AI-1401N22	AC186651.4	98.06%	pos 129085 (R-)
Z_AI-1447F15	AC195310.4	98.9%	pos 1852 (R+)
Z_AI-1470B19	AC195310.4	98.44%	pos 1813 (R+)
Z_AI-17G24	AC195310.4	100%	pos 126537 (R-)	AC195310.4	100%	pos 85152 (F-)
Z_AI-255G7	AC195310.4	98.6%	pos 120740 (R-)	AC195310.4	100%	pos 92546 (F-)
Z_AI-257C5	AC186651.4	100%	pos 129460 (R-)
Z_AI-273G14	AC186651.4	99.54%	pos 123998 (R-)	AC186651.4	98.27%	pos 124031 (F-)
Z_AI-388L7	AC186651.4	100%	pos 168085 (R+)
Z_AI-417D8	AC195310.4	99.64%	pos 138818 (R-)
Z_AI-425O10	AC186651.4	100%	pos 6748 (R-)	AC195310.4	100%	pos 135980 (F+)
Z_AI-425O10	AC195310.4	100%	pos 225580 (R-)
Z_AI-470I18	AC186651.4	100%	pos 167144 (R-)	AC186651.4	100%	pos 133076 (F+)
Z_AI-482F15				AC186651.4	100%	pos 73357 (F+)
Z_AI-546A22	AC195310.4	100%	pos 139101 (R-)
Z_AI-622B7	AC186651.4	100%	pos 141360 (R-)	AC186651.4	99.75%	pos 43753 (F+)
Z_AI-622K19	AC195310.4	100%	pos 233114 (R+)
Z_AI-622K19	AC186651.4	100%	pos 14284 (R+)
Z_AI-625L9				AC186651.4	100%	pos 126677 (F-)
Z_AI-679A16				AC195310.4	100%	pos 137297 (F-)
Z_AI-699A16				AC195310.4	100%	pos 137299 (F-)
Z_AI-767L22				AC195310.4	100%	pos 52540 (F+)
Z_AI-775M10				AC186651.4	100%	pos 128068 (F-)
Z_AI-810D10				AC195310.4	100%	pos 52378 (F+)
Z_AI-876E7	AC186651.4	100%	pos 132360 (R-)
Z_AI-921G4				AC186651.4	100%	pos 127992 (F-)
Z_AI-946A8	AC195310.4	100%	pos 43835 (R-)
Z_AI-952I1				AC186651.4	100%	pos 126949 (F-)

Repeats

acc	start	stop	repeat id	strand	name	family	class

Join Legend

Curator Links

Alignment for AC195310.4 and AC186651.4

Alignment Summary

Alignment 1 of 1