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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs7756992

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr6:20679478 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.292128 (102208/349874, ALFA)
G=0.379448 (100436/264690, TOPMED)
G=0.376495 (52695/139962, GnomAD) (+ 23 more)
G=0.45317 (35663/78696, PAGE_STUDY)
G=0.45725 (12921/28258, 14KJPN)
G=0.46152 (7735/16760, 8.3KJPN)
G=0.4169 (2670/6404, 1000G_30x)
G=0.4127 (2067/5008, 1000G)
G=0.3147 (1410/4480, Estonian)
G=0.2730 (1052/3854, ALSPAC)
G=0.2648 (982/3708, TWINSUK)
A=0.4590 (1345/2930, KOREAN)
G=0.3501 (729/2082, HGDP_Stanford)
G=0.4487 (848/1890, HapMap)
A=0.4749 (870/1832, Korea1K)
G=0.3081 (350/1136, Daghestan)
G=0.265 (264/998, GoNL)
A=0.486 (383/788, PRJEB37584)
G=0.377 (236/626, Chileans)
G=0.222 (133/600, NorthernSweden)
A=0.358 (116/324, SGDP_PRJ)
G=0.315 (68/216, Qatari)
G=0.403 (87/216, Vietnamese)
G=0.41 (22/54, Ancient Sardinia)
G=0.30 (12/40, GENOME_DK)
A=0.38 (9/24, Siberian)
Clinical Significance
Reported in ClinVar
Gene : Consequence
CDKAL1 : Intron Variant
Publications
97 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 350090 A=0.707858 G=0.292142, T=0.000000
European Sub 299030 A=0.725352 G=0.274648, T=0.000000
African Sub 11368 A=0.44502 G=0.55498, T=0.00000
African Others Sub 392 A=0.367 G=0.633, T=0.000
African American Sub 10976 A=0.44780 G=0.55220, T=0.00000
Asian Sub 6970 A=0.4908 G=0.5092, T=0.0000
East Asian Sub 5002 A=0.4790 G=0.5210, T=0.0000
Other Asian Sub 1968 A=0.5208 G=0.4792, T=0.0000
Latin American 1 Sub 1280 A=0.6570 G=0.3430, T=0.0000
Latin American 2 Sub 9374 A=0.6900 G=0.3100, T=0.0000
South Asian Sub 5238 A=0.7358 G=0.2642, T=0.0000
Other Sub 16830 A=0.66958 G=0.33042, T=0.00000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 349874 A=0.707872 G=0.292128, T=0.000000
Allele Frequency Aggregator European Sub 298850 A=0.725374 G=0.274626, T=0.000000
Allele Frequency Aggregator Other Sub 16808 A=0.66938 G=0.33062, T=0.00000
Allele Frequency Aggregator African Sub 11354 A=0.44504 G=0.55496, T=0.00000
Allele Frequency Aggregator Latin American 2 Sub 9374 A=0.6900 G=0.3100, T=0.0000
Allele Frequency Aggregator Asian Sub 6970 A=0.4908 G=0.5092, T=0.0000
Allele Frequency Aggregator South Asian Sub 5238 A=0.7358 G=0.2642, T=0.0000
Allele Frequency Aggregator Latin American 1 Sub 1280 A=0.6570 G=0.3430, T=0.0000
TopMed Global Study-wide 264690 A=0.620552 G=0.379448
gnomAD - Genomes Global Study-wide 139962 A=0.623505 G=0.376495
gnomAD - Genomes European Sub 75832 A=0.71432 G=0.28568
gnomAD - Genomes African Sub 41904 A=0.43896 G=0.56104
gnomAD - Genomes American Sub 13632 A=0.69139 G=0.30861
gnomAD - Genomes Ashkenazi Jewish Sub 3322 A=0.6806 G=0.3194
gnomAD - Genomes East Asian Sub 3124 A=0.5182 G=0.4818
gnomAD - Genomes Other Sub 2148 A=0.6518 G=0.3482
The PAGE Study Global Study-wide 78696 A=0.54683 G=0.45317
The PAGE Study AfricanAmerican Sub 32516 A=0.44892 G=0.55108
The PAGE Study Mexican Sub 10808 A=0.67469 G=0.32531
The PAGE Study Asian Sub 8318 A=0.5207 G=0.4793
The PAGE Study PuertoRican Sub 7918 A=0.6422 G=0.3578
The PAGE Study NativeHawaiian Sub 4534 A=0.4832 G=0.5168
The PAGE Study Cuban Sub 4230 A=0.6811 G=0.3189
The PAGE Study Dominican Sub 3828 A=0.5697 G=0.4303
The PAGE Study CentralAmerican Sub 2446 A=0.6590 G=0.3410
The PAGE Study SouthAmerican Sub 1982 A=0.7053 G=0.2947
The PAGE Study NativeAmerican Sub 1260 A=0.6810 G=0.3190
The PAGE Study SouthAsian Sub 856 A=0.709 G=0.291
14KJPN JAPANESE Study-wide 28258 A=0.54275 G=0.45725
8.3KJPN JAPANESE Study-wide 16760 A=0.53848 G=0.46152
1000Genomes_30x Global Study-wide 6404 A=0.5831 G=0.4169
1000Genomes_30x African Sub 1786 A=0.3651 G=0.6349
1000Genomes_30x Europe Sub 1266 A=0.7196 G=0.2804
1000Genomes_30x South Asian Sub 1202 A=0.7321 G=0.2679
1000Genomes_30x East Asian Sub 1170 A=0.5162 G=0.4838
1000Genomes_30x American Sub 980 A=0.701 G=0.299
1000Genomes Global Study-wide 5008 A=0.5873 G=0.4127
1000Genomes African Sub 1322 A=0.3669 G=0.6331
1000Genomes East Asian Sub 1008 A=0.5278 G=0.4722
1000Genomes Europe Sub 1006 A=0.7187 G=0.2813
1000Genomes South Asian Sub 978 A=0.731 G=0.269
1000Genomes American Sub 694 A=0.700 G=0.300
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.6853 G=0.3147
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.7270 G=0.2730
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.7352 G=0.2648
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.4590 G=0.5410, T=0.0000
HGDP-CEPH-db Supplement 1 Global Study-wide 2082 A=0.6499 G=0.3501
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.583 G=0.417
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.746 G=0.254
HGDP-CEPH-db Supplement 1 Middle_Est Sub 348 A=0.687 G=0.313
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.738 G=0.263
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.397 G=0.603
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.690 G=0.310
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.69 G=0.31
HapMap Global Study-wide 1890 A=0.5513 G=0.4487
HapMap American Sub 770 A=0.639 G=0.361
HapMap African Sub 692 A=0.408 G=0.592
HapMap Asian Sub 252 A=0.532 G=0.468
HapMap Europe Sub 176 A=0.761 G=0.239
Korean Genome Project KOREAN Study-wide 1832 A=0.4749 G=0.5251
Genome-wide autozygosity in Daghestan Global Study-wide 1136 A=0.6919 G=0.3081
Genome-wide autozygosity in Daghestan Daghestan Sub 628 A=0.664 G=0.336
Genome-wide autozygosity in Daghestan Near_East Sub 144 A=0.729 G=0.271
Genome-wide autozygosity in Daghestan Central Asia Sub 122 A=0.680 G=0.320
Genome-wide autozygosity in Daghestan Europe Sub 108 A=0.750 G=0.250
Genome-wide autozygosity in Daghestan South Asian Sub 98 A=0.77 G=0.23
Genome-wide autozygosity in Daghestan Caucasus Sub 36 A=0.69 G=0.31
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.735 G=0.265
CNV burdens in cranial meningiomas Global Study-wide 788 A=0.486 G=0.514
CNV burdens in cranial meningiomas CRM Sub 788 A=0.486 G=0.514
Chileans Chilean Study-wide 626 A=0.623 G=0.377
Northern Sweden ACPOP Study-wide 600 A=0.778 G=0.222
SGDP_PRJ Global Study-wide 324 A=0.358 G=0.642
Qatari Global Study-wide 216 A=0.685 G=0.315
A Vietnamese Genetic Variation Database Global Study-wide 216 A=0.597 G=0.403
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 54 A=0.59 G=0.41
The Danish reference pan genome Danish Study-wide 40 A=0.70 G=0.30
Siberian Global Study-wide 24 A=0.38 G=0.62
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 6 NC_000006.12:g.20679478A>G
GRCh38.p14 chr 6 NC_000006.12:g.20679478A>T
GRCh37.p13 chr 6 NC_000006.11:g.20679709A>G
GRCh37.p13 chr 6 NC_000006.11:g.20679709A>T
CDKAL1 RefSeqGene NG_021195.2:g.150022A>G
CDKAL1 RefSeqGene NG_021195.2:g.150022A>T
Gene: CDKAL1, CDK5 regulatory subunit associated protein 1 like 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
CDKAL1 transcript NM_017774.3:c.371+30101A>G N/A Intron Variant
CDKAL1 transcript variant X2 XM_011514718.1:c.371+3010…

XM_011514718.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X4 XM_011514719.3:c.371+3010…

XM_011514719.3:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X5 XM_017010986.2:c.371+3010…

XM_017010986.2:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X9 XM_024446481.2:c.371+3010…

XM_024446481.2:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X10 XM_047418947.1:c.371+3010…

XM_047418947.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X11 XM_047418948.1:c.371+3010…

XM_047418948.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X1 XM_047418949.1:c.371+3010…

XM_047418949.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X12 XM_047418950.1:c.371+3010…

XM_047418950.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X13 XM_047418951.1:c.371+3010…

XM_047418951.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X3 XM_047418952.1:c.371+3010…

XM_047418952.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X8 XM_047418958.1:c.371+3010…

XM_047418958.1:c.371+30101A>G

N/A Intron Variant
CDKAL1 transcript variant X14 XM_047418953.1:c. N/A Genic Upstream Transcript Variant
CDKAL1 transcript variant X6 XM_047418954.1:c. N/A Genic Upstream Transcript Variant
CDKAL1 transcript variant X7 XM_047418955.1:c. N/A Genic Upstream Transcript Variant
CDKAL1 transcript variant X15 XM_047418956.1:c. N/A Genic Upstream Transcript Variant
CDKAL1 transcript variant X16 XM_047418957.1:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: G (allele ID: 16026 )
ClinVar Accession Disease Names Clinical Significance
RCV000001038.5 Type 2 diabetes mellitus Uncertain-Significance
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= G T
GRCh38.p14 chr 6 NC_000006.12:g.20679478= NC_000006.12:g.20679478A>G NC_000006.12:g.20679478A>T
GRCh37.p13 chr 6 NC_000006.11:g.20679709= NC_000006.11:g.20679709A>G NC_000006.11:g.20679709A>T
CDKAL1 RefSeqGene NG_021195.2:g.150022= NG_021195.2:g.150022A>G NG_021195.2:g.150022A>T
CDKAL1 transcript NM_017774.3:c.371+30101= NM_017774.3:c.371+30101A>G NM_017774.3:c.371+30101A>T
CDKAL1 transcript variant X1 XM_005249201.1:c.371+30101= XM_005249201.1:c.371+30101A>G XM_005249201.1:c.371+30101A>T
CDKAL1 transcript variant X2 XM_005249202.1:c.161+30101= XM_005249202.1:c.161+30101A>G XM_005249202.1:c.161+30101A>T
CDKAL1 transcript variant X3 XM_005249203.1:c.371+30101= XM_005249203.1:c.371+30101A>G XM_005249203.1:c.371+30101A>T
CDKAL1 transcript variant X2 XM_011514718.1:c.371+30101= XM_011514718.1:c.371+30101A>G XM_011514718.1:c.371+30101A>T
CDKAL1 transcript variant X4 XM_011514719.3:c.371+30101= XM_011514719.3:c.371+30101A>G XM_011514719.3:c.371+30101A>T
CDKAL1 transcript variant X5 XM_017010986.2:c.371+30101= XM_017010986.2:c.371+30101A>G XM_017010986.2:c.371+30101A>T
CDKAL1 transcript variant X9 XM_024446481.2:c.371+30101= XM_024446481.2:c.371+30101A>G XM_024446481.2:c.371+30101A>T
CDKAL1 transcript variant X10 XM_047418947.1:c.371+30101= XM_047418947.1:c.371+30101A>G XM_047418947.1:c.371+30101A>T
CDKAL1 transcript variant X11 XM_047418948.1:c.371+30101= XM_047418948.1:c.371+30101A>G XM_047418948.1:c.371+30101A>T
CDKAL1 transcript variant X1 XM_047418949.1:c.371+30101= XM_047418949.1:c.371+30101A>G XM_047418949.1:c.371+30101A>T
CDKAL1 transcript variant X12 XM_047418950.1:c.371+30101= XM_047418950.1:c.371+30101A>G XM_047418950.1:c.371+30101A>T
CDKAL1 transcript variant X13 XM_047418951.1:c.371+30101= XM_047418951.1:c.371+30101A>G XM_047418951.1:c.371+30101A>T
CDKAL1 transcript variant X3 XM_047418952.1:c.371+30101= XM_047418952.1:c.371+30101A>G XM_047418952.1:c.371+30101A>T
CDKAL1 transcript variant X8 XM_047418958.1:c.371+30101= XM_047418958.1:c.371+30101A>G XM_047418958.1:c.371+30101A>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

157 SubSNP, 26 Frequency, 1 ClinVar submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss11805500 Jul 11, 2003 (116)
2 CSHL-HAPMAP ss19684283 Feb 27, 2004 (120)
3 SSAHASNP ss22440661 Apr 05, 2004 (121)
4 ABI ss44686776 Mar 14, 2006 (126)
5 KRIBB_YJKIM ss65847293 Nov 29, 2006 (127)
6 ILLUMINA ss66788266 Nov 29, 2006 (127)
7 ILLUMINA ss67826924 Nov 29, 2006 (127)
8 ILLUMINA ss67988873 Nov 29, 2006 (127)
9 ILLUMINA ss70947945 May 26, 2008 (130)
10 ILLUMINA ss71553400 May 16, 2007 (127)
11 AFFY ss74846931 Aug 16, 2007 (128)
12 ILLUMINA ss75774485 Dec 07, 2007 (129)
13 AFFY ss76754791 Dec 07, 2007 (129)
14 HGSV ss78919847 Dec 07, 2007 (129)
15 ILLUMINA ss79268944 Dec 15, 2007 (130)
16 HGSV ss83357035 Dec 15, 2007 (130)
17 KRIBB_YJKIM ss84719759 Dec 15, 2007 (130)
18 HGSV ss85399731 Dec 15, 2007 (130)
19 HUMANGENOME_JCVI ss98478752 Feb 06, 2009 (130)
20 1000GENOMES ss109811400 Jan 24, 2009 (130)
21 1000GENOMES ss113998626 Jan 25, 2009 (130)
22 ILLUMINA-UK ss116341607 Feb 14, 2009 (130)
23 ILLUMINA ss122827989 Dec 01, 2009 (131)
24 ENSEMBL ss143846748 Dec 01, 2009 (131)
25 ILLUMINA ss154445231 Dec 01, 2009 (131)
26 GMI ss156613974 Dec 01, 2009 (131)
27 ILLUMINA ss159620101 Dec 01, 2009 (131)
28 ILLUMINA ss160911387 Dec 01, 2009 (131)
29 COMPLETE_GENOMICS ss163226085 Jul 04, 2010 (132)
30 ILLUMINA ss172342826 Jul 04, 2010 (132)
31 ILLUMINA ss174532704 Jul 04, 2010 (132)
32 BUSHMAN ss201506092 Jul 04, 2010 (132)
33 1000GENOMES ss222248713 Jul 14, 2010 (132)
34 1000GENOMES ss233352371 Jul 14, 2010 (132)
35 1000GENOMES ss240430558 Jul 15, 2010 (132)
36 GMI ss278679364 May 04, 2012 (137)
37 PJP ss293803572 May 09, 2011 (134)
38 ILLUMINA ss410951749 Sep 17, 2011 (135)
39 BROAD_NHGRI_T2D ss411632250 Jul 19, 2016 (147)
40 ILLUMINA ss481665368 May 04, 2012 (137)
41 ILLUMINA ss481696072 May 04, 2012 (137)
42 ILLUMINA ss482663107 Sep 08, 2015 (146)
43 ILLUMINA ss485627317 May 04, 2012 (137)
44 EXOME_CHIP ss491378239 May 04, 2012 (137)
45 ILLUMINA ss537510301 Sep 08, 2015 (146)
46 TISHKOFF ss559052976 Apr 25, 2013 (138)
47 SSMP ss652961799 Apr 25, 2013 (138)
48 ILLUMINA ss778985066 Sep 08, 2015 (146)
49 ILLUMINA ss780686763 Sep 08, 2015 (146)
50 ILLUMINA ss783259271 Sep 08, 2015 (146)
51 ILLUMINA ss783360295 Sep 08, 2015 (146)
52 ILLUMINA ss784212737 Sep 08, 2015 (146)
53 ILLUMINA ss825599462 Apr 01, 2015 (144)
54 ILLUMINA ss832520162 Sep 08, 2015 (146)
55 ILLUMINA ss833131024 Jul 13, 2019 (153)
56 ILLUMINA ss834447261 Sep 08, 2015 (146)
57 EVA-GONL ss982659378 Aug 21, 2014 (142)
58 JMKIDD_LAB ss1073436711 Aug 21, 2014 (142)
59 1000GENOMES ss1319246505 Aug 21, 2014 (142)
60 HAMMER_LAB ss1397443595 Sep 08, 2015 (146)
61 DDI ss1430660547 Apr 01, 2015 (144)
62 EVA_GENOME_DK ss1581561846 Apr 01, 2015 (144)
63 EVA_DECODE ss1592210259 Apr 01, 2015 (144)
64 EVA_UK10K_ALSPAC ss1615100711 Apr 01, 2015 (144)
65 EVA_UK10K_TWINSUK ss1658094744 Apr 01, 2015 (144)
66 EVA_SVP ss1712841745 Apr 01, 2015 (144)
67 ILLUMINA ss1752618839 Sep 08, 2015 (146)
68 ILLUMINA ss1752618840 Sep 08, 2015 (146)
69 HAMMER_LAB ss1804312138 Sep 08, 2015 (146)
70 ILLUMINA ss1917799735 Feb 12, 2016 (147)
71 WEILL_CORNELL_DGM ss1925914723 Feb 12, 2016 (147)
72 ILLUMINA ss1946169009 Feb 12, 2016 (147)
73 ILLUMINA ss1958868968 Feb 12, 2016 (147)
74 GENOMED ss1970328903 Jul 19, 2016 (147)
75 JJLAB ss2023576691 Sep 14, 2016 (149)
76 ILLUMINA ss2094949388 Dec 20, 2016 (150)
77 ILLUMINA ss2095171155 Dec 20, 2016 (150)
78 ILLUMINA ss2095171156 Dec 20, 2016 (150)
79 USC_VALOUEV ss2151741837 Nov 08, 2017 (151)
80 HUMAN_LONGEVITY ss2282349885 Dec 20, 2016 (150)
81 SYSTEMSBIOZJU ss2626276467 Nov 08, 2017 (151)
82 ILLUMINA ss2634409714 Nov 08, 2017 (151)
83 ILLUMINA ss2635154502 Nov 08, 2017 (151)
84 GRF ss2707329804 Nov 08, 2017 (151)
85 ILLUMINA ss2711061768 Nov 08, 2017 (151)
86 GNOMAD ss2836559767 Nov 08, 2017 (151)
87 AFFY ss2985355490 Nov 08, 2017 (151)
88 AFFY ss2985984914 Nov 08, 2017 (151)
89 SWEGEN ss2998630612 Nov 08, 2017 (151)
90 ILLUMINA ss3022581323 Nov 08, 2017 (151)
91 BIOINF_KMB_FNS_UNIBA ss3025574164 Nov 08, 2017 (151)
92 CSHL ss3346870402 Nov 08, 2017 (151)
93 ILLUMINA ss3629460333 Oct 12, 2018 (152)
94 ILLUMINA ss3629460334 Oct 12, 2018 (152)
95 ILLUMINA ss3632329482 Oct 12, 2018 (152)
96 ILLUMINA ss3633408927 Oct 12, 2018 (152)
97 ILLUMINA ss3634131023 Oct 12, 2018 (152)
98 ILLUMINA ss3635047609 Oct 12, 2018 (152)
99 ILLUMINA ss3635047610 Oct 12, 2018 (152)
100 ILLUMINA ss3635812287 Oct 12, 2018 (152)
101 ILLUMINA ss3636763143 Oct 12, 2018 (152)
102 ILLUMINA ss3637565013 Oct 12, 2018 (152)
103 ILLUMINA ss3638611132 Oct 12, 2018 (152)
104 ILLUMINA ss3639308626 Oct 12, 2018 (152)
105 ILLUMINA ss3639679403 Oct 12, 2018 (152)
106 ILLUMINA ss3640754905 Oct 12, 2018 (152)
107 ILLUMINA ss3640754906 Oct 12, 2018 (152)
108 ILLUMINA ss3641192290 Oct 12, 2018 (152)
109 ILLUMINA ss3641489410 Oct 12, 2018 (152)
110 ILLUMINA ss3643552617 Oct 12, 2018 (152)
111 ILLUMINA ss3644902078 Oct 12, 2018 (152)
112 URBANLAB ss3648284840 Oct 12, 2018 (152)
113 ILLUMINA ss3653090563 Oct 12, 2018 (152)
114 ILLUMINA ss3653090564 Oct 12, 2018 (152)
115 ILLUMINA ss3653090565 Oct 12, 2018 (152)
116 ILLUMINA ss3654123642 Oct 12, 2018 (152)
117 EGCUT_WGS ss3666561838 Jul 13, 2019 (153)
118 EVA_DECODE ss3716726364 Jul 13, 2019 (153)
119 ILLUMINA ss3726316329 Jul 13, 2019 (153)
120 ACPOP ss3733268314 Jul 13, 2019 (153)
121 ILLUMINA ss3744546390 Jul 13, 2019 (153)
122 ILLUMINA ss3745347710 Jul 13, 2019 (153)
123 ILLUMINA ss3745347711 Jul 13, 2019 (153)
124 EVA ss3764700039 Jul 13, 2019 (153)
125 PAGE_CC ss3771267274 Jul 13, 2019 (153)
126 ILLUMINA ss3772841480 Jul 13, 2019 (153)
127 ILLUMINA ss3772841481 Jul 13, 2019 (153)
128 KHV_HUMAN_GENOMES ss3807862852 Jul 13, 2019 (153)
129 EVA ss3829771401 Apr 26, 2020 (154)
130 EVA ss3838361714 Apr 26, 2020 (154)
131 EVA ss3843802330 Apr 26, 2020 (154)
132 HGDP ss3847825843 Apr 26, 2020 (154)
133 SGDP_PRJ ss3864062337 Apr 26, 2020 (154)
134 KRGDB ss3910821484 Apr 26, 2020 (154)
135 KOGIC ss3958639025 Apr 26, 2020 (154)
136 EVA ss3984562681 Apr 26, 2021 (155)
137 EVA ss3985204694 Apr 26, 2021 (155)
138 TOPMED ss4695942283 Apr 26, 2021 (155)
139 TOMMO_GENOMICS ss5176472440 Apr 26, 2021 (155)
140 EVA ss5237389730 Apr 26, 2021 (155)
141 1000G_HIGH_COVERAGE ss5267647941 Oct 13, 2022 (156)
142 EVA ss5315127957 Oct 13, 2022 (156)
143 EVA ss5364247962 Oct 13, 2022 (156)
144 HUGCELL_USP ss5465418373 Oct 13, 2022 (156)
145 EVA ss5508371545 Oct 13, 2022 (156)
146 1000G_HIGH_COVERAGE ss5553184343 Oct 13, 2022 (156)
147 SANFORD_IMAGENETICS ss5624617108 Oct 13, 2022 (156)
148 SANFORD_IMAGENETICS ss5639908579 Oct 13, 2022 (156)
149 TOMMO_GENOMICS ss5714227456 Oct 13, 2022 (156)
150 EVA ss5799678501 Oct 13, 2022 (156)
151 YY_MCH ss5807212246 Oct 13, 2022 (156)
152 EVA ss5841890895 Oct 13, 2022 (156)
153 EVA ss5847285613 Oct 13, 2022 (156)
154 EVA ss5855234429 Oct 13, 2022 (156)
155 EVA ss5882935838 Oct 13, 2022 (156)
156 EVA ss5968413008 Oct 13, 2022 (156)
157 EVA ss5979772695 Oct 13, 2022 (156)
158 1000Genomes NC_000006.11 - 20679709 Oct 12, 2018 (152)
159 1000Genomes_30x NC_000006.12 - 20679478 Oct 13, 2022 (156)
160 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 20679709 Oct 12, 2018 (152)
161 Chileans NC_000006.11 - 20679709 Apr 26, 2020 (154)
162 Genome-wide autozygosity in Daghestan NC_000006.10 - 20787688 Apr 26, 2020 (154)
163 Genetic variation in the Estonian population NC_000006.11 - 20679709 Oct 12, 2018 (152)
164 The Danish reference pan genome NC_000006.11 - 20679709 Apr 26, 2020 (154)
165 gnomAD - Genomes NC_000006.12 - 20679478 Apr 26, 2021 (155)
166 Genome of the Netherlands Release 5 NC_000006.11 - 20679709 Apr 26, 2020 (154)
167 HGDP-CEPH-db Supplement 1 NC_000006.10 - 20787688 Apr 26, 2020 (154)
168 HapMap NC_000006.12 - 20679478 Apr 26, 2020 (154)
169 KOREAN population from KRGDB NC_000006.11 - 20679709 Apr 26, 2020 (154)
170 Korean Genome Project NC_000006.12 - 20679478 Apr 26, 2020 (154)
171 Northern Sweden NC_000006.11 - 20679709 Jul 13, 2019 (153)
172 The PAGE Study NC_000006.12 - 20679478 Jul 13, 2019 (153)
173 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000006.11 - 20679709 Apr 26, 2021 (155)
174 CNV burdens in cranial meningiomas NC_000006.11 - 20679709 Apr 26, 2021 (155)
175 Qatari NC_000006.11 - 20679709 Apr 26, 2020 (154)
176 SGDP_PRJ NC_000006.11 - 20679709 Apr 26, 2020 (154)
177 Siberian NC_000006.11 - 20679709 Apr 26, 2020 (154)
178 8.3KJPN NC_000006.11 - 20679709 Apr 26, 2021 (155)
179 14KJPN NC_000006.12 - 20679478 Oct 13, 2022 (156)
180 TopMed NC_000006.12 - 20679478 Apr 26, 2021 (155)
181 UK 10K study - Twins NC_000006.11 - 20679709 Oct 12, 2018 (152)
182 A Vietnamese Genetic Variation Database NC_000006.11 - 20679709 Jul 13, 2019 (153)
183 ALFA NC_000006.12 - 20679478 Apr 26, 2021 (155)
184 ClinVar RCV000001038.5 Oct 12, 2018 (152)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs52806824 Sep 21, 2007 (128)
rs60638889 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss78919847, ss83357035, ss85399731, ss3639308626, ss3639679403 NC_000006.9:20787687:A:G NC_000006.12:20679477:A:G (self)
418276, 503735, ss109811400, ss113998626, ss116341607, ss163226085, ss201506092, ss278679364, ss293803572, ss481665368, ss825599462, ss1397443595, ss1592210259, ss1712841745, ss2094949388, ss2635154502, ss3643552617, ss3847825843 NC_000006.10:20787687:A:G NC_000006.12:20679477:A:G (self)
31000702, 17270069, 373389, 12300086, 7726785, 7662321, 17998878, 6553179, 430621, 112059, 7956653, 16079317, 4258191, 34441747, 17270069, 3822765, ss222248713, ss233352371, ss240430558, ss481696072, ss482663107, ss485627317, ss491378239, ss537510301, ss559052976, ss652961799, ss778985066, ss780686763, ss783259271, ss783360295, ss784212737, ss832520162, ss833131024, ss834447261, ss982659378, ss1073436711, ss1319246505, ss1430660547, ss1581561846, ss1615100711, ss1658094744, ss1752618839, ss1752618840, ss1804312138, ss1917799735, ss1925914723, ss1946169009, ss1958868968, ss1970328903, ss2023576691, ss2095171155, ss2095171156, ss2151741837, ss2626276467, ss2634409714, ss2707329804, ss2711061768, ss2836559767, ss2985355490, ss2985984914, ss2998630612, ss3022581323, ss3346870402, ss3629460333, ss3629460334, ss3632329482, ss3633408927, ss3634131023, ss3635047609, ss3635047610, ss3635812287, ss3636763143, ss3637565013, ss3638611132, ss3640754905, ss3640754906, ss3641192290, ss3641489410, ss3644902078, ss3653090563, ss3653090564, ss3653090565, ss3654123642, ss3666561838, ss3733268314, ss3744546390, ss3745347710, ss3745347711, ss3764700039, ss3772841480, ss3772841481, ss3829771401, ss3838361714, ss3864062337, ss3910821484, ss3984562681, ss3985204694, ss5176472440, ss5237389730, ss5315127957, ss5364247962, ss5508371545, ss5624617108, ss5639908579, ss5799678501, ss5841890895, ss5847285613, ss5968413008, ss5979772695 NC_000006.11:20679708:A:G NC_000006.12:20679477:A:G (self)
RCV000001038.5, 40710278, 219062304, 3077391, 15017026, 488743, 48064560, 533319841, 8458158127, ss2282349885, ss3025574164, ss3648284840, ss3716726364, ss3726316329, ss3771267274, ss3807862852, ss3843802330, ss3958639025, ss4695942283, ss5267647941, ss5465418373, ss5553184343, ss5714227456, ss5807212246, ss5855234429, ss5882935838 NC_000006.12:20679477:A:G NC_000006.12:20679477:A:G (self)
ss11805500, ss19684283, ss22440661 NT_007592.13:11537959:A:G NC_000006.12:20679477:A:G (self)
ss44686776, ss65847293, ss66788266, ss67826924, ss67988873, ss70947945, ss71553400, ss74846931, ss75774485, ss76754791, ss79268944, ss84719759, ss98478752, ss122827989, ss143846748, ss154445231, ss156613974, ss159620101, ss160911387, ss172342826, ss174532704, ss410951749, ss411632250 NT_007592.15:20619708:A:G NC_000006.12:20679477:A:G (self)
17998878, ss3910821484 NC_000006.11:20679708:A:T NC_000006.12:20679477:A:T (self)
8458158127 NC_000006.12:20679477:A:T NC_000006.12:20679477:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

97 citations for rs7756992
PMID Title Author Year Journal
17460697 A variant in CDKAL1 influences insulin response and risk of type 2 diabetes. Steinthorsdottir V et al. 2007 Nature genetics
17786212 Heterogeneity in meta-analyses of genome-wide association investigations. Ioannidis JP et al. 2007 PloS one
17928989 Variations in the HHEX gene are associated with increased risk of type 2 diabetes in the Japanese population. Horikoshi M et al. 2007 Diabetologia
18162508 Association of CDKAL1, IGF2BP2, CDKN2A/B, HHEX, SLC30A8, and KCNJ11 with susceptibility to type 2 diabetes in a Japanese population. Omori S et al. 2008 Diabetes
18210030 Analysis of novel risk loci for type 2 diabetes in a general French population: the D.E.S.I.R. study. Cauchi S et al. 2008 Journal of molecular medicine (Berlin, Germany)
18426861 Association analysis of type 2 diabetes Loci in type 1 diabetes. Qu HQ et al. 2008 Diabetes
18437351 Genetic analysis of recently identified type 2 diabetes loci in 1,638 unselected patients with type 2 diabetes and 1,858 control participants from a Norwegian population-based cohort (the HUNT study). Hertel JK et al. 2008 Diabetologia
18461161 Post genome-wide association studies of novel genes associated with type 2 diabetes show gene-gene interaction and high predictive value. Cauchi S et al. 2008 PloS one
18469204 Implication of genetic variants near TCF7L2, SLC30A8, HHEX, CDKAL1, CDKN2A/B, IGF2BP2, and FTO in type 2 diabetes and obesity in 6,719 Asians. Ng MC et al. 2008 Diabetes
18477659 Replication of genome-wide association studies of type 2 diabetes susceptibility in Japan. Horikawa Y et al. 2008 The Journal of clinical endocrinology and metabolism
18633108 Common variants in CDKAL1, CDKN2A/B, IGF2BP2, SLC30A8, and HHEX/IDE genes are associated with type 2 diabetes and impaired fasting glucose in a Chinese Han population. Wu Y et al. 2008 Diabetes
18835935 Genome-wide linkage scan in Gullah-speaking African American families with type 2 diabetes: the Sea Islands Genetic African American Registry (Project SuGAR). Sale MM et al. 2009 Diabetes
19002430 Type 2 diabetes-associated genetic variants discovered in the recent genome-wide association studies are related to gestational diabetes mellitus in the Korean population. Cho YM et al. 2009 Diabetologia
19008344 Association analysis of variation in/near FTO, CDKAL1, SLC30A8, HHEX, EXT2, IGF2BP2, LOC387761, and CDKN2B with type 2 diabetes and related quantitative traits in Pima Indians. Rong R et al. 2009 Diabetes
19033397 Replication study of candidate genes associated with type 2 diabetes based on genome-wide screening. Tabara Y et al. 2009 Diabetes
19279076 Genetic predisposition, Western dietary pattern, and the risk of type 2 diabetes in men. Qi L et al. 2009 The American journal of clinical nutrition
19401414 Confirmation of multiple risk Loci and genetic impacts by a genome-wide association study of type 2 diabetes in the Japanese population. Takeuchi F et al. 2009 Diabetes
19455305 No association of multiple type 2 diabetes loci with type 1 diabetes. Raj SM et al. 2009 Diabetologia
19474294 Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Hindorff LA et al. 2009 Proceedings of the National Academy of Sciences of the United States of America
19592620 Examination of type 2 diabetes loci implicates CDKAL1 as a birth weight gene. Zhao J et al. 2009 Diabetes
19718565 Genetic variants of cyclin-dependent kinase 5 regulatory subunit associated protein 1-like 1 and transcription factor 7-like 2 are not associated with polycystic ovary syndrome in Chinese women. Liu X et al. 2010 Gynecological endocrinology
19741166 Common genetic determinants of glucose homeostasis in healthy children: the European Youth Heart Study. Kelliny C et al. 2009 Diabetes
19750184 Genome-wide association studies for atherosclerotic vascular disease and its risk factors. Ding K et al. 2009 Circulation. Cardiovascular genetics
19862325 PPARG, KCNJ11, CDKAL1, CDKN2A-CDKN2B, IDE-KIF11-HHEX, IGF2BP2 and SLC30A8 are associated with type 2 diabetes in a Chinese population. Hu C et al. 2009 PloS one
19933996 Examination of all type 2 diabetes GWAS loci reveals HHEX-IDE as a locus influencing pediatric BMI. Zhao J et al. 2010 Diabetes
20043145 Improvements in glucose homeostasis in response to regular exercise are influenced by the PPARG Pro12Ala variant: results from the HERITAGE Family Study. Ruchat SM et al. 2010 Diabetologia
20080751 Long-range gene regulation links genomic type 2 diabetes and obesity risk regions to HHEX, SOX4, and IRX3. Ragvin A et al. 2010 Proceedings of the National Academy of Sciences of the United States of America
20203524 Genetic susceptibility to type 2 diabetes is associated with reduced prostate cancer risk. Pierce BL et al. 2010 Human heredity
20490451 Type 2 diabetes risk alleles near ADCY5, CDKAL1 and HHEX-IDE are associated with reduced birthweight. Andersson EA et al. 2010 Diabetologia
20580033 Replication of recently described type 2 diabetes gene variants in a South Indian population. Chidambaram M et al. 2010 Metabolism
21103332 Combined effects of 19 common variations on type 2 diabetes in Chinese: results from two community-based studies. Xu M et al. 2010 PloS one
21278902 Genetic risk profiling for prediction of type 2 diabetes. Mihaescu R et al. 2011 PLoS currents
21297524 The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations. Devaney JM et al. 2011 Pediatric research
21368910 Heterogeneity of genetic associations of CDKAL1 and HHEX with susceptibility of type 2 diabetes mellitus by gender. Ryoo H et al. 2011 European journal of human genetics
21416855 [Relationship of the CDKAL1 and KCNQ1 gene polymorphisms to the age at diagnosis of type 2 diabetes in the Slovakian population]. Dobríková M et al. 2011 Vnitrni lekarstvi
21444075 Type 2 diabetes susceptibility single-nucleotide polymorphisms are not associated with polycystic ovary syndrome. Ewens KG et al. 2011 Fertility and sterility
21611789 The carriage of risk variants of CDKAL1 impairs beta-cell function in both diabetic and non-diabetic patients and reduces response to non-sulfonylurea and sulfonylurea agonists of the pancreatic KATP channel. Chistiakov DA et al. 2011 Acta diabetologica
22052079 Association analysis of 31 common polymorphisms with type 2 diabetes and its related traits in Indian sib pairs. Gupta V et al. 2012 Diabetologia
22119613 Replication study of common variants in CDKAL1 and CDKN2A/2B genes associated with type 2 diabetes in Lebanese Arab population. Nemr R et al. 2012 Diabetes research and clinical practice
22233651 A genome-wide association study of gestational diabetes mellitus in Korean women. Kwak SH et al. 2012 Diabetes
22292718 Variation in CDKAL1 gene is associated with therapeutic response to sulphonylureas. Schroner Z et al. 2012 Physiological research
22333905 Estimating the contribution of genetic variants to difference in incidence of disease between population groups. Moonesinghe R et al. 2012 European journal of human genetics
22708638 Effect of communicating genetic and phenotypic risk for type 2 diabetes in combination with lifestyle advice on objectively measured physical activity: protocol of a randomised controlled trial. Godino JG et al. 2012 BMC public health
22923468 Contribution of common genetic variation to the risk of type 2 diabetes in the Mexican Mestizo population. Gamboa-Meléndez MA et al. 2012 Diabetes
23185337 Joint effect of genetic and lifestyle risk factors on type 2 diabetes risk among Chinese men and women. Villegas R et al. 2012 PloS one
23185617 Genetic variant SLC2A2 [corrected] Is associated with risk of cardiovascular disease – assessing the individual and cumulative effect of 46 type 2 diabetes related genetic variants. Borglykke A et al. 2012 PloS one
23349771 Association study of 25 type 2 diabetes related Loci with measures of obesity in Indian sib pairs. Gupta V et al. 2013 PloS one
24012816 The relationship between five widely-evaluated variants in CDKN2A/B and CDKAL1 genes and the risk of type 2 diabetes: a meta-analysis. Peng F et al. 2013 Gene
24185407 CDKAL1 gene rs7756992 A/G polymorphism and type 2 diabetes mellitus: a meta-analysis of 62,567 subjects. Li YY et al. 2013 Scientific reports
24636221 Contribution of CDKAL1 rs7756992 and IGF2BP2 rs4402960 polymorphisms in type 2 diabetes, diabetic complications, obesity risk and hypertension in the Tunisian population. Lasram K et al. 2015 Journal of diabetes
24637646 Cross-sectional and longitudinal replication analyses of genome-wide association loci of type 2 diabetes in Han Chinese. Zhao Q et al. 2014 PloS one
24653947 Cumulative Effect of Common Genetic Variants Predicts Incident Type 2 Diabetes: A Study of 21,183 Subjects from Three Large Prospective Cohorts. Yang J et al. 2011 Epidemiology (Sunnyvale, Calif.)
24760768 Identification of a splicing variant that regulates type 2 diabetes risk factor CDKAL1 level by a coding-independent mechanism in human. Zhou B et al. 2014 Human molecular genetics
24845081 Gene-lifestyle interaction and type 2 diabetes: the EPIC interact case-cohort study. Langenberg C et al. 2014 PLoS medicine
24898818 Association analysis of IGF2BP2, KCNJ11, and CDKAL1 polymorphisms with type 2 diabetes mellitus in a Moroccan population: a case-control study and meta-analysis. Benrahma H et al. 2014 Biochemical genetics
24906951 Type 2 diabetes susceptibility gene variants predispose to adult-onset autoimmune diabetes. Andersen MK et al. 2014 Diabetologia
24935819 Exploring genetic variants predisposing to diabetes mellitus and their association with indicators of socioeconomic status. Schmidt B et al. 2014 BMC public health
25145545 Does genetic heterogeneity account for the divergent risk of type 2 diabetes in South Asian and white European populations? Sohani ZN et al. 2014 Diabetologia
25288178 The association between the rs6495309 polymorphism in CHRNA3 gene and lung cancer risk in Chinese: a meta-analysis. Xiao M et al. 2014 Scientific reports
25587982 Cumulative effect and predictive value of genetic variants associated with type 2 diabetes in Han Chinese: a case-control study. Qian Y et al. 2015 PloS one
25634229 A cautionary tale: the non-causal association between type 2 diabetes risk SNP, rs7756992, and levels of non-coding RNA, CDKAL1-v1. Locke JM et al. 2015 Diabetologia
25658847 Do variants associated with susceptibility to pancreatic cancer and type 2 diabetes reciprocally affect risk? Wu L et al. 2015 PloS one
25723968 Identification of Genetic Variants of Gestational Diabetes in South Indians. Kanthimathi S et al. 2015 Diabetes technology & therapeutics
25774817 Genetics of type 2 diabetes-pitfalls and possibilities. Prasad RB et al. 2015 Genes
26042206 Gene-gene and gene-environment interactions in the etiology of type 2 diabetes mellitus in the population of Hyderabad, India. Uma Jyothi K et al. 2015 Meta gene
26168825 Positive Association Between Type 2 Diabetes Risk Alleles Near CDKAL1 and Reduced Birthweight in Chinese Han Individuals. Sun XF et al. 2015 Chinese medical journal
26240488 Utilizing Genetic Predisposition Score in Predicting Risk of Type 2 Diabetes Mellitus Incidence: A Community-based Cohort Study on Middle-aged Koreans. Park HY et al. 2015 Journal of Korean medical science
26648684 Update on genetics and diabetic retinopathy. Hampton BM et al. 2015 Clinical ophthalmology (Auckland, N.Z.)
26806836 Genetic and clinical variables identify predictors for chronic kidney disease in type 2 diabetes. Jiang G et al. 2016 Kidney international
26873362 Gene Polymorphism Association with Type 2 Diabetes and Related Gene-Gene and Gene-Environment Interactions in a Uyghur Population. Xiao S et al. 2016 Medical science monitor
26961502 Variants in the FTO and CDKAL1 loci have recessive effects on risk of obesity and type 2 diabetes, respectively. Wood AR et al. 2016 Diabetologia
26983698 Joint effects of diabetic-related genomic loci on the therapeutic efficacy of oral anti-diabetic drugs in Chinese type 2 diabetes patients. Chen M et al. 2016 Scientific reports
27139004 A Common Susceptibility Gene for Type 2 Diabetes Is Associated with Drug Response to a DPP-4 Inhibitor: Pharmacogenomic Cohort in Okinawa Japan. Osada UN et al. 2016 PloS one
27275426 The association analysis polymorphism of CDKAL1 and diabetic retinopathy in Chinese Han population. Liu NJ et al. 2016 International journal of ophthalmology
27281091 Genetic variants associated with lean and obese type 2 diabetes in a Han Chinese population: A case-control study. Kong X et al. 2016 Medicine
27294943 Association between IGF2BP2 Polymorphisms and Type 2 Diabetes Mellitus: A Case-Control Study and Meta-Analysis. Rao P et al. 2016 International journal of environmental research and public health
27377502 Association of CDKAL1, CDKN2A/B & HHEX gene polymorphisms with type 2 diabetes mellitus in the population of Hyderabad, India. Kommoju UJ et al. 2016 The Indian journal of medical research
27383215 Type 2 Diabetes Risk Allele Loci in the Qatari Population. O'Beirne SL et al. 2016 PloS one
27424552 Genomics era and complex disorders: Implications of GWAS with special reference to coronary artery disease, type 2 diabetes mellitus, and cancers. Pranavchand R et al. 2016 Journal of postgraduate medicine
27588103 IGF2BP2 rs11705701 polymorphisms are associated with prediabetes in a Chinese population: A population-based case-control study. Han L et al. 2016 Experimental and therapeutic medicine
27589775 Validation of Type 2 Diabetes Risk Variants Identified by Genome-Wide Association Studies in Northern Han Chinese. Rao P et al. 2016 International journal of environmental research and public health
28717589 Association of polymorphic markers of genes FTO, KCNJ11, CDKAL1, SLC30A8, and CDKN2B with type 2 diabetes mellitus in the Russian population. Nikitin AG et al. 2017 PeerJ
28738793 Association between 28 single nucleotide polymorphisms and type 2 diabetes mellitus in the Kazakh population: a case-control study. Sikhayeva N et al. 2017 BMC medical genetics
28821857 CDKAL1 rs7756992 is associated with diabetic retinopathy in a Chinese population with type 2 diabetes. Peng D et al. 2017 Scientific reports
29372795 [The analysis of association between type 2 diabetes and polymorphic markers in the CDKAL1 gene and in the HHEX/IDE locus]. Khodyrev DS et al. 2016 Genetika
29871606 Impact of KCNQ1, CDKN2A/2B, CDKAL1, HHEX, MTNR1B, SLC30A8, TCF7L2, and UBE2E2 on risk of developing type 2 diabetes in Thai population. Plengvidhya N et al. 2018 BMC medical genetics
30074174 Meta-analysis of GABRB3 Gene Polymorphisms and Susceptibility to Autism Spectrum Disorder. Noroozi R et al. 2018 Journal of molecular neuroscience
30647622 Common variants in TCF7L2 and CDKAL1 genes and risk of type 2 diabetes mellitus in Egyptians. El-Lebedy D et al. 2016 Journal, genetic engineering & biotechnology
32722593 Coffee Consumption, Genetic Polymorphisms, and the Risk of Type 2 Diabetes Mellitus: A Pooled Analysis of Four Prospective Cohort Studies. Kim AN et al. 2020 International journal of environmental research and public health
32764395 Dietary Protein and Fat Intake Affects Diabetes Risk with CDKAL1 Genetic Variants in Korean Adults. Choi WJ et al. 2020 International journal of molecular sciences
33965365 The risk variant of CDKAL1 (rs7756992) impairs fasting glucose levels and insulin resistance improvements after a partial meal-replacement hypocaloric diet. Izaola-Jáuregui O et al. 2021 Endocrinologia, diabetes y nutricion
34131278 Genetic polymorphisms associated with obesity in the Arab world: a systematic review. Younes S et al. 2021 International journal of obesity (2005)
34178825 Polymorphic genetic markers and how they are associated with clinical and metabolic indicators of type 2 diabetes mellitus in the Kazakh population. Benberin VV et al. 2021 Journal of diabetes and metabolic disorders
34665019 Pharmacogenetics of sulfonylurea-induced hypoglycemia in Type 2 diabetes patients: the SUCLINGEN study. Loganadan NK et al. 2021 Pharmacogenomics
34721291 CDK5 Regulatory Subunit-Associated Protein 1-Like 1 Gene Polymorphisms and Gestational Diabetes Mellitus Risk: A Trial Sequential Meta-Analysis of 13,306 Subjects. Yu XY et al. 2021 Frontiers in endocrinology
34803393 Pharmacogenomics and Personalized Medicine in Type 2 Diabetes Mellitus: Potential Implications for Clinical Practice. Venkatachalapathy P et al. 2021 Pharmacogenomics and personalized medicine
35090536 CDKAL1 gene rs7756992 A/G and rs7754840 G/C polymorphisms are associated with gestational diabetes mellitus in a sample of Bangladeshi population: implication for future T2DM prophylaxis. Amin USM et al. 2022 Diabetology & metabolic syndrome
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07