dbSNP Short Genetic Variations
Welcome to the Reference SNP (rs) Report
All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.
Reference SNP (rs) Report
This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.
rs7756992
Current Build 156
Released September 21, 2022
- Organism
- Homo sapiens
- Position
-
chr6:20679478 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
- Alleles
- A>G / A>T
- Variation Type
- SNV Single Nucleotide Variation
- Frequency
-
G=0.292128 (102208/349874, ALFA)G=0.379448 (100436/264690, TOPMED)G=0.376495 (52695/139962, GnomAD) (+ 23 more)
- Clinical Significance
- Reported in ClinVar
- Gene : Consequence
- CDKAL1 : Intron Variant
- Publications
- 97 citations
- Genomic View
- See rs on genome
ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.
Population | Group | Sample Size | Ref Allele | Alt Allele |
---|---|---|---|---|
Total | Global | 350090 | A=0.707858 | G=0.292142, T=0.000000 |
European | Sub | 299030 | A=0.725352 | G=0.274648, T=0.000000 |
African | Sub | 11368 | A=0.44502 | G=0.55498, T=0.00000 |
African Others | Sub | 392 | A=0.367 | G=0.633, T=0.000 |
African American | Sub | 10976 | A=0.44780 | G=0.55220, T=0.00000 |
Asian | Sub | 6970 | A=0.4908 | G=0.5092, T=0.0000 |
East Asian | Sub | 5002 | A=0.4790 | G=0.5210, T=0.0000 |
Other Asian | Sub | 1968 | A=0.5208 | G=0.4792, T=0.0000 |
Latin American 1 | Sub | 1280 | A=0.6570 | G=0.3430, T=0.0000 |
Latin American 2 | Sub | 9374 | A=0.6900 | G=0.3100, T=0.0000 |
South Asian | Sub | 5238 | A=0.7358 | G=0.2642, T=0.0000 |
Other | Sub | 16830 | A=0.66958 | G=0.33042, T=0.00000 |
Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").
DownloadStudy | Population | Group | Sample Size | Ref Allele | Alt Allele |
---|---|---|---|---|---|
Allele Frequency Aggregator | Total | Global | 349874 | A=0.707872 | G=0.292128, T=0.000000 |
Allele Frequency Aggregator | European | Sub | 298850 | A=0.725374 | G=0.274626, T=0.000000 |
Allele Frequency Aggregator | Other | Sub | 16808 | A=0.66938 | G=0.33062, T=0.00000 |
Allele Frequency Aggregator | African | Sub | 11354 | A=0.44504 | G=0.55496, T=0.00000 |
Allele Frequency Aggregator | Latin American 2 | Sub | 9374 | A=0.6900 | G=0.3100, T=0.0000 |
Allele Frequency Aggregator | Asian | Sub | 6970 | A=0.4908 | G=0.5092, T=0.0000 |
Allele Frequency Aggregator | South Asian | Sub | 5238 | A=0.7358 | G=0.2642, T=0.0000 |
Allele Frequency Aggregator | Latin American 1 | Sub | 1280 | A=0.6570 | G=0.3430, T=0.0000 |
TopMed | Global | Study-wide | 264690 | A=0.620552 | G=0.379448 |
gnomAD - Genomes | Global | Study-wide | 139962 | A=0.623505 | G=0.376495 |
gnomAD - Genomes | European | Sub | 75832 | A=0.71432 | G=0.28568 |
gnomAD - Genomes | African | Sub | 41904 | A=0.43896 | G=0.56104 |
gnomAD - Genomes | American | Sub | 13632 | A=0.69139 | G=0.30861 |
gnomAD - Genomes | Ashkenazi Jewish | Sub | 3322 | A=0.6806 | G=0.3194 |
gnomAD - Genomes | East Asian | Sub | 3124 | A=0.5182 | G=0.4818 |
gnomAD - Genomes | Other | Sub | 2148 | A=0.6518 | G=0.3482 |
The PAGE Study | Global | Study-wide | 78696 | A=0.54683 | G=0.45317 |
The PAGE Study | AfricanAmerican | Sub | 32516 | A=0.44892 | G=0.55108 |
The PAGE Study | Mexican | Sub | 10808 | A=0.67469 | G=0.32531 |
The PAGE Study | Asian | Sub | 8318 | A=0.5207 | G=0.4793 |
The PAGE Study | PuertoRican | Sub | 7918 | A=0.6422 | G=0.3578 |
The PAGE Study | NativeHawaiian | Sub | 4534 | A=0.4832 | G=0.5168 |
The PAGE Study | Cuban | Sub | 4230 | A=0.6811 | G=0.3189 |
The PAGE Study | Dominican | Sub | 3828 | A=0.5697 | G=0.4303 |
The PAGE Study | CentralAmerican | Sub | 2446 | A=0.6590 | G=0.3410 |
The PAGE Study | SouthAmerican | Sub | 1982 | A=0.7053 | G=0.2947 |
The PAGE Study | NativeAmerican | Sub | 1260 | A=0.6810 | G=0.3190 |
The PAGE Study | SouthAsian | Sub | 856 | A=0.709 | G=0.291 |
14KJPN | JAPANESE | Study-wide | 28258 | A=0.54275 | G=0.45725 |
8.3KJPN | JAPANESE | Study-wide | 16760 | A=0.53848 | G=0.46152 |
1000Genomes_30x | Global | Study-wide | 6404 | A=0.5831 | G=0.4169 |
1000Genomes_30x | African | Sub | 1786 | A=0.3651 | G=0.6349 |
1000Genomes_30x | Europe | Sub | 1266 | A=0.7196 | G=0.2804 |
1000Genomes_30x | South Asian | Sub | 1202 | A=0.7321 | G=0.2679 |
1000Genomes_30x | East Asian | Sub | 1170 | A=0.5162 | G=0.4838 |
1000Genomes_30x | American | Sub | 980 | A=0.701 | G=0.299 |
1000Genomes | Global | Study-wide | 5008 | A=0.5873 | G=0.4127 |
1000Genomes | African | Sub | 1322 | A=0.3669 | G=0.6331 |
1000Genomes | East Asian | Sub | 1008 | A=0.5278 | G=0.4722 |
1000Genomes | Europe | Sub | 1006 | A=0.7187 | G=0.2813 |
1000Genomes | South Asian | Sub | 978 | A=0.731 | G=0.269 |
1000Genomes | American | Sub | 694 | A=0.700 | G=0.300 |
Genetic variation in the Estonian population | Estonian | Study-wide | 4480 | A=0.6853 | G=0.3147 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.7270 | G=0.2730 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.7352 | G=0.2648 |
KOREAN population from KRGDB | KOREAN | Study-wide | 2930 | A=0.4590 | G=0.5410, T=0.0000 |
HGDP-CEPH-db Supplement 1 | Global | Study-wide | 2082 | A=0.6499 | G=0.3501 |
HGDP-CEPH-db Supplement 1 | Est_Asia | Sub | 470 | A=0.583 | G=0.417 |
HGDP-CEPH-db Supplement 1 | Central_South_Asia | Sub | 414 | A=0.746 | G=0.254 |
HGDP-CEPH-db Supplement 1 | Middle_Est | Sub | 348 | A=0.687 | G=0.313 |
HGDP-CEPH-db Supplement 1 | Europe | Sub | 320 | A=0.738 | G=0.263 |
HGDP-CEPH-db Supplement 1 | Africa | Sub | 242 | A=0.397 | G=0.603 |
HGDP-CEPH-db Supplement 1 | America | Sub | 216 | A=0.690 | G=0.310 |
HGDP-CEPH-db Supplement 1 | Oceania | Sub | 72 | A=0.69 | G=0.31 |
HapMap | Global | Study-wide | 1890 | A=0.5513 | G=0.4487 |
HapMap | American | Sub | 770 | A=0.639 | G=0.361 |
HapMap | African | Sub | 692 | A=0.408 | G=0.592 |
HapMap | Asian | Sub | 252 | A=0.532 | G=0.468 |
HapMap | Europe | Sub | 176 | A=0.761 | G=0.239 |
Korean Genome Project | KOREAN | Study-wide | 1832 | A=0.4749 | G=0.5251 |
Genome-wide autozygosity in Daghestan | Global | Study-wide | 1136 | A=0.6919 | G=0.3081 |
Genome-wide autozygosity in Daghestan | Daghestan | Sub | 628 | A=0.664 | G=0.336 |
Genome-wide autozygosity in Daghestan | Near_East | Sub | 144 | A=0.729 | G=0.271 |
Genome-wide autozygosity in Daghestan | Central Asia | Sub | 122 | A=0.680 | G=0.320 |
Genome-wide autozygosity in Daghestan | Europe | Sub | 108 | A=0.750 | G=0.250 |
Genome-wide autozygosity in Daghestan | South Asian | Sub | 98 | A=0.77 | G=0.23 |
Genome-wide autozygosity in Daghestan | Caucasus | Sub | 36 | A=0.69 | G=0.31 |
Genome of the Netherlands Release 5 | Genome of the Netherlands | Study-wide | 998 | A=0.735 | G=0.265 |
CNV burdens in cranial meningiomas | Global | Study-wide | 788 | A=0.486 | G=0.514 |
CNV burdens in cranial meningiomas | CRM | Sub | 788 | A=0.486 | G=0.514 |
Chileans | Chilean | Study-wide | 626 | A=0.623 | G=0.377 |
Northern Sweden | ACPOP | Study-wide | 600 | A=0.778 | G=0.222 |
SGDP_PRJ | Global | Study-wide | 324 | A=0.358 | G=0.642 |
Qatari | Global | Study-wide | 216 | A=0.685 | G=0.315 |
A Vietnamese Genetic Variation Database | Global | Study-wide | 216 | A=0.597 | G=0.403 |
Ancient Sardinia genome-wide 1240k capture data generation and analysis | Global | Study-wide | 54 | A=0.59 | G=0.41 |
The Danish reference pan genome | Danish | Study-wide | 40 | A=0.70 | G=0.30 |
Siberian | Global | Study-wide | 24 | A=0.38 | G=0.62 |
Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.
Sequence name | Change |
---|---|
GRCh38.p14 chr 6 | NC_000006.12:g.20679478A>G |
GRCh38.p14 chr 6 | NC_000006.12:g.20679478A>T |
GRCh37.p13 chr 6 | NC_000006.11:g.20679709A>G |
GRCh37.p13 chr 6 | NC_000006.11:g.20679709A>T |
CDKAL1 RefSeqGene | NG_021195.2:g.150022A>G |
CDKAL1 RefSeqGene | NG_021195.2:g.150022A>T |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
CDKAL1 transcript | NM_017774.3:c.371+30101A>G | N/A | Intron Variant |
CDKAL1 transcript variant X2 |
XM_011514718.1:c.371+3010… XM_011514718.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X4 |
XM_011514719.3:c.371+3010… XM_011514719.3:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X5 |
XM_017010986.2:c.371+3010… XM_017010986.2:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X9 |
XM_024446481.2:c.371+3010… XM_024446481.2:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X10 |
XM_047418947.1:c.371+3010… XM_047418947.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X11 |
XM_047418948.1:c.371+3010… XM_047418948.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X1 |
XM_047418949.1:c.371+3010… XM_047418949.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X12 |
XM_047418950.1:c.371+3010… XM_047418950.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X13 |
XM_047418951.1:c.371+3010… XM_047418951.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X3 |
XM_047418952.1:c.371+3010… XM_047418952.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X8 |
XM_047418958.1:c.371+3010… XM_047418958.1:c.371+30101A>G |
N/A | Intron Variant |
CDKAL1 transcript variant X14 | XM_047418953.1:c. | N/A | Genic Upstream Transcript Variant |
CDKAL1 transcript variant X6 | XM_047418954.1:c. | N/A | Genic Upstream Transcript Variant |
CDKAL1 transcript variant X7 | XM_047418955.1:c. | N/A | Genic Upstream Transcript Variant |
CDKAL1 transcript variant X15 | XM_047418956.1:c. | N/A | Genic Upstream Transcript Variant |
CDKAL1 transcript variant X16 | XM_047418957.1:c. | N/A | Genic Upstream Transcript Variant |
Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000001038.5 | Type 2 diabetes mellitus | Uncertain-Significance |
Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".
Placement | A= | G | T |
---|---|---|---|
GRCh38.p14 chr 6 | NC_000006.12:g.20679478= | NC_000006.12:g.20679478A>G | NC_000006.12:g.20679478A>T |
GRCh37.p13 chr 6 | NC_000006.11:g.20679709= | NC_000006.11:g.20679709A>G | NC_000006.11:g.20679709A>T |
CDKAL1 RefSeqGene | NG_021195.2:g.150022= | NG_021195.2:g.150022A>G | NG_021195.2:g.150022A>T |
CDKAL1 transcript | NM_017774.3:c.371+30101= | NM_017774.3:c.371+30101A>G | NM_017774.3:c.371+30101A>T |
CDKAL1 transcript variant X1 | XM_005249201.1:c.371+30101= | XM_005249201.1:c.371+30101A>G | XM_005249201.1:c.371+30101A>T |
CDKAL1 transcript variant X2 | XM_005249202.1:c.161+30101= | XM_005249202.1:c.161+30101A>G | XM_005249202.1:c.161+30101A>T |
CDKAL1 transcript variant X3 | XM_005249203.1:c.371+30101= | XM_005249203.1:c.371+30101A>G | XM_005249203.1:c.371+30101A>T |
CDKAL1 transcript variant X2 | XM_011514718.1:c.371+30101= | XM_011514718.1:c.371+30101A>G | XM_011514718.1:c.371+30101A>T |
CDKAL1 transcript variant X4 | XM_011514719.3:c.371+30101= | XM_011514719.3:c.371+30101A>G | XM_011514719.3:c.371+30101A>T |
CDKAL1 transcript variant X5 | XM_017010986.2:c.371+30101= | XM_017010986.2:c.371+30101A>G | XM_017010986.2:c.371+30101A>T |
CDKAL1 transcript variant X9 | XM_024446481.2:c.371+30101= | XM_024446481.2:c.371+30101A>G | XM_024446481.2:c.371+30101A>T |
CDKAL1 transcript variant X10 | XM_047418947.1:c.371+30101= | XM_047418947.1:c.371+30101A>G | XM_047418947.1:c.371+30101A>T |
CDKAL1 transcript variant X11 | XM_047418948.1:c.371+30101= | XM_047418948.1:c.371+30101A>G | XM_047418948.1:c.371+30101A>T |
CDKAL1 transcript variant X1 | XM_047418949.1:c.371+30101= | XM_047418949.1:c.371+30101A>G | XM_047418949.1:c.371+30101A>T |
CDKAL1 transcript variant X12 | XM_047418950.1:c.371+30101= | XM_047418950.1:c.371+30101A>G | XM_047418950.1:c.371+30101A>T |
CDKAL1 transcript variant X13 | XM_047418951.1:c.371+30101= | XM_047418951.1:c.371+30101A>G | XM_047418951.1:c.371+30101A>T |
CDKAL1 transcript variant X3 | XM_047418952.1:c.371+30101= | XM_047418952.1:c.371+30101A>G | XM_047418952.1:c.371+30101A>T |
CDKAL1 transcript variant X8 | XM_047418958.1:c.371+30101= | XM_047418958.1:c.371+30101A>G | XM_047418958.1:c.371+30101A>T |
Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.
No | Submitter | Submission ID | Date (Build) |
---|---|---|---|
1 | WI_SSAHASNP | ss11805500 | Jul 11, 2003 (116) |
2 | CSHL-HAPMAP | ss19684283 | Feb 27, 2004 (120) |
3 | SSAHASNP | ss22440661 | Apr 05, 2004 (121) |
4 | ABI | ss44686776 | Mar 14, 2006 (126) |
5 | KRIBB_YJKIM | ss65847293 | Nov 29, 2006 (127) |
6 | ILLUMINA | ss66788266 | Nov 29, 2006 (127) |
7 | ILLUMINA | ss67826924 | Nov 29, 2006 (127) |
8 | ILLUMINA | ss67988873 | Nov 29, 2006 (127) |
9 | ILLUMINA | ss70947945 | May 26, 2008 (130) |
10 | ILLUMINA | ss71553400 | May 16, 2007 (127) |
11 | AFFY | ss74846931 | Aug 16, 2007 (128) |
12 | ILLUMINA | ss75774485 | Dec 07, 2007 (129) |
13 | AFFY | ss76754791 | Dec 07, 2007 (129) |
14 | HGSV | ss78919847 | Dec 07, 2007 (129) |
15 | ILLUMINA | ss79268944 | Dec 15, 2007 (130) |
16 | HGSV | ss83357035 | Dec 15, 2007 (130) |
17 | KRIBB_YJKIM | ss84719759 | Dec 15, 2007 (130) |
18 | HGSV | ss85399731 | Dec 15, 2007 (130) |
19 | HUMANGENOME_JCVI | ss98478752 | Feb 06, 2009 (130) |
20 | 1000GENOMES | ss109811400 | Jan 24, 2009 (130) |
21 | 1000GENOMES | ss113998626 | Jan 25, 2009 (130) |
22 | ILLUMINA-UK | ss116341607 | Feb 14, 2009 (130) |
23 | ILLUMINA | ss122827989 | Dec 01, 2009 (131) |
24 | ENSEMBL | ss143846748 | Dec 01, 2009 (131) |
25 | ILLUMINA | ss154445231 | Dec 01, 2009 (131) |
26 | GMI | ss156613974 | Dec 01, 2009 (131) |
27 | ILLUMINA | ss159620101 | Dec 01, 2009 (131) |
28 | ILLUMINA | ss160911387 | Dec 01, 2009 (131) |
29 | COMPLETE_GENOMICS | ss163226085 | Jul 04, 2010 (132) |
30 | ILLUMINA | ss172342826 | Jul 04, 2010 (132) |
31 | ILLUMINA | ss174532704 | Jul 04, 2010 (132) |
32 | BUSHMAN | ss201506092 | Jul 04, 2010 (132) |
33 | 1000GENOMES | ss222248713 | Jul 14, 2010 (132) |
34 | 1000GENOMES | ss233352371 | Jul 14, 2010 (132) |
35 | 1000GENOMES | ss240430558 | Jul 15, 2010 (132) |
36 | GMI | ss278679364 | May 04, 2012 (137) |
37 | PJP | ss293803572 | May 09, 2011 (134) |
38 | ILLUMINA | ss410951749 | Sep 17, 2011 (135) |
39 | BROAD_NHGRI_T2D | ss411632250 | Jul 19, 2016 (147) |
40 | ILLUMINA | ss481665368 | May 04, 2012 (137) |
41 | ILLUMINA | ss481696072 | May 04, 2012 (137) |
42 | ILLUMINA | ss482663107 | Sep 08, 2015 (146) |
43 | ILLUMINA | ss485627317 | May 04, 2012 (137) |
44 | EXOME_CHIP | ss491378239 | May 04, 2012 (137) |
45 | ILLUMINA | ss537510301 | Sep 08, 2015 (146) |
46 | TISHKOFF | ss559052976 | Apr 25, 2013 (138) |
47 | SSMP | ss652961799 | Apr 25, 2013 (138) |
48 | ILLUMINA | ss778985066 | Sep 08, 2015 (146) |
49 | ILLUMINA | ss780686763 | Sep 08, 2015 (146) |
50 | ILLUMINA | ss783259271 | Sep 08, 2015 (146) |
51 | ILLUMINA | ss783360295 | Sep 08, 2015 (146) |
52 | ILLUMINA | ss784212737 | Sep 08, 2015 (146) |
53 | ILLUMINA | ss825599462 | Apr 01, 2015 (144) |
54 | ILLUMINA | ss832520162 | Sep 08, 2015 (146) |
55 | ILLUMINA | ss833131024 | Jul 13, 2019 (153) |
56 | ILLUMINA | ss834447261 | Sep 08, 2015 (146) |
57 | EVA-GONL | ss982659378 | Aug 21, 2014 (142) |
58 | JMKIDD_LAB | ss1073436711 | Aug 21, 2014 (142) |
59 | 1000GENOMES | ss1319246505 | Aug 21, 2014 (142) |
60 | HAMMER_LAB | ss1397443595 | Sep 08, 2015 (146) |
61 | DDI | ss1430660547 | Apr 01, 2015 (144) |
62 | EVA_GENOME_DK | ss1581561846 | Apr 01, 2015 (144) |
63 | EVA_DECODE | ss1592210259 | Apr 01, 2015 (144) |
64 | EVA_UK10K_ALSPAC | ss1615100711 | Apr 01, 2015 (144) |
65 | EVA_UK10K_TWINSUK | ss1658094744 | Apr 01, 2015 (144) |
66 | EVA_SVP | ss1712841745 | Apr 01, 2015 (144) |
67 | ILLUMINA | ss1752618839 | Sep 08, 2015 (146) |
68 | ILLUMINA | ss1752618840 | Sep 08, 2015 (146) |
69 | HAMMER_LAB | ss1804312138 | Sep 08, 2015 (146) |
70 | ILLUMINA | ss1917799735 | Feb 12, 2016 (147) |
71 | WEILL_CORNELL_DGM | ss1925914723 | Feb 12, 2016 (147) |
72 | ILLUMINA | ss1946169009 | Feb 12, 2016 (147) |
73 | ILLUMINA | ss1958868968 | Feb 12, 2016 (147) |
74 | GENOMED | ss1970328903 | Jul 19, 2016 (147) |
75 | JJLAB | ss2023576691 | Sep 14, 2016 (149) |
76 | ILLUMINA | ss2094949388 | Dec 20, 2016 (150) |
77 | ILLUMINA | ss2095171155 | Dec 20, 2016 (150) |
78 | ILLUMINA | ss2095171156 | Dec 20, 2016 (150) |
79 | USC_VALOUEV | ss2151741837 | Nov 08, 2017 (151) |
80 | HUMAN_LONGEVITY | ss2282349885 | Dec 20, 2016 (150) |
81 | SYSTEMSBIOZJU | ss2626276467 | Nov 08, 2017 (151) |
82 | ILLUMINA | ss2634409714 | Nov 08, 2017 (151) |
83 | ILLUMINA | ss2635154502 | Nov 08, 2017 (151) |
84 | GRF | ss2707329804 | Nov 08, 2017 (151) |
85 | ILLUMINA | ss2711061768 | Nov 08, 2017 (151) |
86 | GNOMAD | ss2836559767 | Nov 08, 2017 (151) |
87 | AFFY | ss2985355490 | Nov 08, 2017 (151) |
88 | AFFY | ss2985984914 | Nov 08, 2017 (151) |
89 | SWEGEN | ss2998630612 | Nov 08, 2017 (151) |
90 | ILLUMINA | ss3022581323 | Nov 08, 2017 (151) |
91 | BIOINF_KMB_FNS_UNIBA | ss3025574164 | Nov 08, 2017 (151) |
92 | CSHL | ss3346870402 | Nov 08, 2017 (151) |
93 | ILLUMINA | ss3629460333 | Oct 12, 2018 (152) |
94 | ILLUMINA | ss3629460334 | Oct 12, 2018 (152) |
95 | ILLUMINA | ss3632329482 | Oct 12, 2018 (152) |
96 | ILLUMINA | ss3633408927 | Oct 12, 2018 (152) |
97 | ILLUMINA | ss3634131023 | Oct 12, 2018 (152) |
98 | ILLUMINA | ss3635047609 | Oct 12, 2018 (152) |
99 | ILLUMINA | ss3635047610 | Oct 12, 2018 (152) |
100 | ILLUMINA | ss3635812287 | Oct 12, 2018 (152) |
101 | ILLUMINA | ss3636763143 | Oct 12, 2018 (152) |
102 | ILLUMINA | ss3637565013 | Oct 12, 2018 (152) |
103 | ILLUMINA | ss3638611132 | Oct 12, 2018 (152) |
104 | ILLUMINA | ss3639308626 | Oct 12, 2018 (152) |
105 | ILLUMINA | ss3639679403 | Oct 12, 2018 (152) |
106 | ILLUMINA | ss3640754905 | Oct 12, 2018 (152) |
107 | ILLUMINA | ss3640754906 | Oct 12, 2018 (152) |
108 | ILLUMINA | ss3641192290 | Oct 12, 2018 (152) |
109 | ILLUMINA | ss3641489410 | Oct 12, 2018 (152) |
110 | ILLUMINA | ss3643552617 | Oct 12, 2018 (152) |
111 | ILLUMINA | ss3644902078 | Oct 12, 2018 (152) |
112 | URBANLAB | ss3648284840 | Oct 12, 2018 (152) |
113 | ILLUMINA | ss3653090563 | Oct 12, 2018 (152) |
114 | ILLUMINA | ss3653090564 | Oct 12, 2018 (152) |
115 | ILLUMINA | ss3653090565 | Oct 12, 2018 (152) |
116 | ILLUMINA | ss3654123642 | Oct 12, 2018 (152) |
117 | EGCUT_WGS | ss3666561838 | Jul 13, 2019 (153) |
118 | EVA_DECODE | ss3716726364 | Jul 13, 2019 (153) |
119 | ILLUMINA | ss3726316329 | Jul 13, 2019 (153) |
120 | ACPOP | ss3733268314 | Jul 13, 2019 (153) |
121 | ILLUMINA | ss3744546390 | Jul 13, 2019 (153) |
122 | ILLUMINA | ss3745347710 | Jul 13, 2019 (153) |
123 | ILLUMINA | ss3745347711 | Jul 13, 2019 (153) |
124 | EVA | ss3764700039 | Jul 13, 2019 (153) |
125 | PAGE_CC | ss3771267274 | Jul 13, 2019 (153) |
126 | ILLUMINA | ss3772841480 | Jul 13, 2019 (153) |
127 | ILLUMINA | ss3772841481 | Jul 13, 2019 (153) |
128 | KHV_HUMAN_GENOMES | ss3807862852 | Jul 13, 2019 (153) |
129 | EVA | ss3829771401 | Apr 26, 2020 (154) |
130 | EVA | ss3838361714 | Apr 26, 2020 (154) |
131 | EVA | ss3843802330 | Apr 26, 2020 (154) |
132 | HGDP | ss3847825843 | Apr 26, 2020 (154) |
133 | SGDP_PRJ | ss3864062337 | Apr 26, 2020 (154) |
134 | KRGDB | ss3910821484 | Apr 26, 2020 (154) |
135 | KOGIC | ss3958639025 | Apr 26, 2020 (154) |
136 | EVA | ss3984562681 | Apr 26, 2021 (155) |
137 | EVA | ss3985204694 | Apr 26, 2021 (155) |
138 | TOPMED | ss4695942283 | Apr 26, 2021 (155) |
139 | TOMMO_GENOMICS | ss5176472440 | Apr 26, 2021 (155) |
140 | EVA | ss5237389730 | Apr 26, 2021 (155) |
141 | 1000G_HIGH_COVERAGE | ss5267647941 | Oct 13, 2022 (156) |
142 | EVA | ss5315127957 | Oct 13, 2022 (156) |
143 | EVA | ss5364247962 | Oct 13, 2022 (156) |
144 | HUGCELL_USP | ss5465418373 | Oct 13, 2022 (156) |
145 | EVA | ss5508371545 | Oct 13, 2022 (156) |
146 | 1000G_HIGH_COVERAGE | ss5553184343 | Oct 13, 2022 (156) |
147 | SANFORD_IMAGENETICS | ss5624617108 | Oct 13, 2022 (156) |
148 | SANFORD_IMAGENETICS | ss5639908579 | Oct 13, 2022 (156) |
149 | TOMMO_GENOMICS | ss5714227456 | Oct 13, 2022 (156) |
150 | EVA | ss5799678501 | Oct 13, 2022 (156) |
151 | YY_MCH | ss5807212246 | Oct 13, 2022 (156) |
152 | EVA | ss5841890895 | Oct 13, 2022 (156) |
153 | EVA | ss5847285613 | Oct 13, 2022 (156) |
154 | EVA | ss5855234429 | Oct 13, 2022 (156) |
155 | EVA | ss5882935838 | Oct 13, 2022 (156) |
156 | EVA | ss5968413008 | Oct 13, 2022 (156) |
157 | EVA | ss5979772695 | Oct 13, 2022 (156) |
158 | 1000Genomes | NC_000006.11 - 20679709 | Oct 12, 2018 (152) |
159 | 1000Genomes_30x | NC_000006.12 - 20679478 | Oct 13, 2022 (156) |
160 | The Avon Longitudinal Study of Parents and Children | NC_000006.11 - 20679709 | Oct 12, 2018 (152) |
161 | Chileans | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
162 | Genome-wide autozygosity in Daghestan | NC_000006.10 - 20787688 | Apr 26, 2020 (154) |
163 | Genetic variation in the Estonian population | NC_000006.11 - 20679709 | Oct 12, 2018 (152) |
164 | The Danish reference pan genome | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
165 | gnomAD - Genomes | NC_000006.12 - 20679478 | Apr 26, 2021 (155) |
166 | Genome of the Netherlands Release 5 | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
167 | HGDP-CEPH-db Supplement 1 | NC_000006.10 - 20787688 | Apr 26, 2020 (154) |
168 | HapMap | NC_000006.12 - 20679478 | Apr 26, 2020 (154) |
169 | KOREAN population from KRGDB | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
170 | Korean Genome Project | NC_000006.12 - 20679478 | Apr 26, 2020 (154) |
171 | Northern Sweden | NC_000006.11 - 20679709 | Jul 13, 2019 (153) |
172 | The PAGE Study | NC_000006.12 - 20679478 | Jul 13, 2019 (153) |
173 | Ancient Sardinia genome-wide 1240k capture data generation and analysis | NC_000006.11 - 20679709 | Apr 26, 2021 (155) |
174 | CNV burdens in cranial meningiomas | NC_000006.11 - 20679709 | Apr 26, 2021 (155) |
175 | Qatari | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
176 | SGDP_PRJ | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
177 | Siberian | NC_000006.11 - 20679709 | Apr 26, 2020 (154) |
178 | 8.3KJPN | NC_000006.11 - 20679709 | Apr 26, 2021 (155) |
179 | 14KJPN | NC_000006.12 - 20679478 | Oct 13, 2022 (156) |
180 | TopMed | NC_000006.12 - 20679478 | Apr 26, 2021 (155) |
181 | UK 10K study - Twins | NC_000006.11 - 20679709 | Oct 12, 2018 (152) |
182 | A Vietnamese Genetic Variation Database | NC_000006.11 - 20679709 | Jul 13, 2019 (153) |
183 | ALFA | NC_000006.12 - 20679478 | Apr 26, 2021 (155) |
184 | ClinVar | RCV000001038.5 | Oct 12, 2018 (152) |
History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).
Associated ID | History Updated (Build) |
---|---|
rs52806824 | Sep 21, 2007 (128) |
rs60638889 | May 26, 2008 (130) |
Submission IDs | Observation SPDI | Canonical SPDI | Source RSIDs |
---|---|---|---|
ss78919847, ss83357035, ss85399731, ss3639308626, ss3639679403 | NC_000006.9:20787687:A:G | NC_000006.12:20679477:A:G | (self) |
418276, 503735, ss109811400, ss113998626, ss116341607, ss163226085, ss201506092, ss278679364, ss293803572, ss481665368, ss825599462, ss1397443595, ss1592210259, ss1712841745, ss2094949388, ss2635154502, ss3643552617, ss3847825843 | NC_000006.10:20787687:A:G | NC_000006.12:20679477:A:G | (self) |
31000702, 17270069, 373389, 12300086, 7726785, 7662321, 17998878, 6553179, 430621, 112059, 7956653, 16079317, 4258191, 34441747, 17270069, 3822765, ss222248713, ss233352371, ss240430558, ss481696072, ss482663107, ss485627317, ss491378239, ss537510301, ss559052976, ss652961799, ss778985066, ss780686763, ss783259271, ss783360295, ss784212737, ss832520162, ss833131024, ss834447261, ss982659378, ss1073436711, ss1319246505, ss1430660547, ss1581561846, ss1615100711, ss1658094744, ss1752618839, ss1752618840, ss1804312138, ss1917799735, ss1925914723, ss1946169009, ss1958868968, ss1970328903, ss2023576691, ss2095171155, ss2095171156, ss2151741837, ss2626276467, ss2634409714, ss2707329804, ss2711061768, ss2836559767, ss2985355490, ss2985984914, ss2998630612, ss3022581323, ss3346870402, ss3629460333, ss3629460334, ss3632329482, ss3633408927, ss3634131023, ss3635047609, ss3635047610, ss3635812287, ss3636763143, ss3637565013, ss3638611132, ss3640754905, ss3640754906, ss3641192290, ss3641489410, ss3644902078, ss3653090563, ss3653090564, ss3653090565, ss3654123642, ss3666561838, ss3733268314, ss3744546390, ss3745347710, ss3745347711, ss3764700039, ss3772841480, ss3772841481, ss3829771401, ss3838361714, ss3864062337, ss3910821484, ss3984562681, ss3985204694, ss5176472440, ss5237389730, ss5315127957, ss5364247962, ss5508371545, ss5624617108, ss5639908579, ss5799678501, ss5841890895, ss5847285613, ss5968413008, ss5979772695 | NC_000006.11:20679708:A:G | NC_000006.12:20679477:A:G | (self) |
RCV000001038.5, 40710278, 219062304, 3077391, 15017026, 488743, 48064560, 533319841, 8458158127, ss2282349885, ss3025574164, ss3648284840, ss3716726364, ss3726316329, ss3771267274, ss3807862852, ss3843802330, ss3958639025, ss4695942283, ss5267647941, ss5465418373, ss5553184343, ss5714227456, ss5807212246, ss5855234429, ss5882935838 | NC_000006.12:20679477:A:G | NC_000006.12:20679477:A:G | (self) |
ss11805500, ss19684283, ss22440661 | NT_007592.13:11537959:A:G | NC_000006.12:20679477:A:G | (self) |
ss44686776, ss65847293, ss66788266, ss67826924, ss67988873, ss70947945, ss71553400, ss74846931, ss75774485, ss76754791, ss79268944, ss84719759, ss98478752, ss122827989, ss143846748, ss154445231, ss156613974, ss159620101, ss160911387, ss172342826, ss174532704, ss410951749, ss411632250 | NT_007592.15:20619708:A:G | NC_000006.12:20679477:A:G | (self) |
17998878, ss3910821484 | NC_000006.11:20679708:A:T | NC_000006.12:20679477:A:T | (self) |
8458158127 | NC_000006.12:20679477:A:T | NC_000006.12:20679477:A:T | (self) |
Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.
PMID | Title | Author | Year | Journal |
---|---|---|---|---|
17460697 | A variant in CDKAL1 influences insulin response and risk of type 2 diabetes. | Steinthorsdottir V et al. | 2007 | Nature genetics |
17786212 | Heterogeneity in meta-analyses of genome-wide association investigations. | Ioannidis JP et al. | 2007 | PloS one |
17928989 | Variations in the HHEX gene are associated with increased risk of type 2 diabetes in the Japanese population. | Horikoshi M et al. | 2007 | Diabetologia |
18162508 | Association of CDKAL1, IGF2BP2, CDKN2A/B, HHEX, SLC30A8, and KCNJ11 with susceptibility to type 2 diabetes in a Japanese population. | Omori S et al. | 2008 | Diabetes |
18210030 | Analysis of novel risk loci for type 2 diabetes in a general French population: the D.E.S.I.R. study. | Cauchi S et al. | 2008 | Journal of molecular medicine (Berlin, Germany) |
18426861 | Association analysis of type 2 diabetes Loci in type 1 diabetes. | Qu HQ et al. | 2008 | Diabetes |
18437351 | Genetic analysis of recently identified type 2 diabetes loci in 1,638 unselected patients with type 2 diabetes and 1,858 control participants from a Norwegian population-based cohort (the HUNT study). | Hertel JK et al. | 2008 | Diabetologia |
18461161 | Post genome-wide association studies of novel genes associated with type 2 diabetes show gene-gene interaction and high predictive value. | Cauchi S et al. | 2008 | PloS one |
18469204 | Implication of genetic variants near TCF7L2, SLC30A8, HHEX, CDKAL1, CDKN2A/B, IGF2BP2, and FTO in type 2 diabetes and obesity in 6,719 Asians. | Ng MC et al. | 2008 | Diabetes |
18477659 | Replication of genome-wide association studies of type 2 diabetes susceptibility in Japan. | Horikawa Y et al. | 2008 | The Journal of clinical endocrinology and metabolism |
18633108 | Common variants in CDKAL1, CDKN2A/B, IGF2BP2, SLC30A8, and HHEX/IDE genes are associated with type 2 diabetes and impaired fasting glucose in a Chinese Han population. | Wu Y et al. | 2008 | Diabetes |
18835935 | Genome-wide linkage scan in Gullah-speaking African American families with type 2 diabetes: the Sea Islands Genetic African American Registry (Project SuGAR). | Sale MM et al. | 2009 | Diabetes |
19002430 | Type 2 diabetes-associated genetic variants discovered in the recent genome-wide association studies are related to gestational diabetes mellitus in the Korean population. | Cho YM et al. | 2009 | Diabetologia |
19008344 | Association analysis of variation in/near FTO, CDKAL1, SLC30A8, HHEX, EXT2, IGF2BP2, LOC387761, and CDKN2B with type 2 diabetes and related quantitative traits in Pima Indians. | Rong R et al. | 2009 | Diabetes |
19033397 | Replication study of candidate genes associated with type 2 diabetes based on genome-wide screening. | Tabara Y et al. | 2009 | Diabetes |
19279076 | Genetic predisposition, Western dietary pattern, and the risk of type 2 diabetes in men. | Qi L et al. | 2009 | The American journal of clinical nutrition |
19401414 | Confirmation of multiple risk Loci and genetic impacts by a genome-wide association study of type 2 diabetes in the Japanese population. | Takeuchi F et al. | 2009 | Diabetes |
19455305 | No association of multiple type 2 diabetes loci with type 1 diabetes. | Raj SM et al. | 2009 | Diabetologia |
19474294 | Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. | Hindorff LA et al. | 2009 | Proceedings of the National Academy of Sciences of the United States of America |
19592620 | Examination of type 2 diabetes loci implicates CDKAL1 as a birth weight gene. | Zhao J et al. | 2009 | Diabetes |
19718565 | Genetic variants of cyclin-dependent kinase 5 regulatory subunit associated protein 1-like 1 and transcription factor 7-like 2 are not associated with polycystic ovary syndrome in Chinese women. | Liu X et al. | 2010 | Gynecological endocrinology |
19741166 | Common genetic determinants of glucose homeostasis in healthy children: the European Youth Heart Study. | Kelliny C et al. | 2009 | Diabetes |
19750184 | Genome-wide association studies for atherosclerotic vascular disease and its risk factors. | Ding K et al. | 2009 | Circulation. Cardiovascular genetics |
19862325 | PPARG, KCNJ11, CDKAL1, CDKN2A-CDKN2B, IDE-KIF11-HHEX, IGF2BP2 and SLC30A8 are associated with type 2 diabetes in a Chinese population. | Hu C et al. | 2009 | PloS one |
19933996 | Examination of all type 2 diabetes GWAS loci reveals HHEX-IDE as a locus influencing pediatric BMI. | Zhao J et al. | 2010 | Diabetes |
20043145 | Improvements in glucose homeostasis in response to regular exercise are influenced by the PPARG Pro12Ala variant: results from the HERITAGE Family Study. | Ruchat SM et al. | 2010 | Diabetologia |
20080751 | Long-range gene regulation links genomic type 2 diabetes and obesity risk regions to HHEX, SOX4, and IRX3. | Ragvin A et al. | 2010 | Proceedings of the National Academy of Sciences of the United States of America |
20203524 | Genetic susceptibility to type 2 diabetes is associated with reduced prostate cancer risk. | Pierce BL et al. | 2010 | Human heredity |
20490451 | Type 2 diabetes risk alleles near ADCY5, CDKAL1 and HHEX-IDE are associated with reduced birthweight. | Andersson EA et al. | 2010 | Diabetologia |
20580033 | Replication of recently described type 2 diabetes gene variants in a South Indian population. | Chidambaram M et al. | 2010 | Metabolism |
21103332 | Combined effects of 19 common variations on type 2 diabetes in Chinese: results from two community-based studies. | Xu M et al. | 2010 | PloS one |
21278902 | Genetic risk profiling for prediction of type 2 diabetes. | Mihaescu R et al. | 2011 | PLoS currents |
21297524 | The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations. | Devaney JM et al. | 2011 | Pediatric research |
21368910 | Heterogeneity of genetic associations of CDKAL1 and HHEX with susceptibility of type 2 diabetes mellitus by gender. | Ryoo H et al. | 2011 | European journal of human genetics |
21416855 | [Relationship of the CDKAL1 and KCNQ1 gene polymorphisms to the age at diagnosis of type 2 diabetes in the Slovakian population]. | Dobríková M et al. | 2011 | Vnitrni lekarstvi |
21444075 | Type 2 diabetes susceptibility single-nucleotide polymorphisms are not associated with polycystic ovary syndrome. | Ewens KG et al. | 2011 | Fertility and sterility |
21611789 | The carriage of risk variants of CDKAL1 impairs beta-cell function in both diabetic and non-diabetic patients and reduces response to non-sulfonylurea and sulfonylurea agonists of the pancreatic KATP channel. | Chistiakov DA et al. | 2011 | Acta diabetologica |
22052079 | Association analysis of 31 common polymorphisms with type 2 diabetes and its related traits in Indian sib pairs. | Gupta V et al. | 2012 | Diabetologia |
22119613 | Replication study of common variants in CDKAL1 and CDKN2A/2B genes associated with type 2 diabetes in Lebanese Arab population. | Nemr R et al. | 2012 | Diabetes research and clinical practice |
22233651 | A genome-wide association study of gestational diabetes mellitus in Korean women. | Kwak SH et al. | 2012 | Diabetes |
22292718 | Variation in CDKAL1 gene is associated with therapeutic response to sulphonylureas. | Schroner Z et al. | 2012 | Physiological research |
22333905 | Estimating the contribution of genetic variants to difference in incidence of disease between population groups. | Moonesinghe R et al. | 2012 | European journal of human genetics |
22708638 | Effect of communicating genetic and phenotypic risk for type 2 diabetes in combination with lifestyle advice on objectively measured physical activity: protocol of a randomised controlled trial. | Godino JG et al. | 2012 | BMC public health |
22923468 | Contribution of common genetic variation to the risk of type 2 diabetes in the Mexican Mestizo population. | Gamboa-Meléndez MA et al. | 2012 | Diabetes |
23185337 | Joint effect of genetic and lifestyle risk factors on type 2 diabetes risk among Chinese men and women. | Villegas R et al. | 2012 | PloS one |
23185617 | Genetic variant SLC2A2 [corrected] Is associated with risk of cardiovascular disease – assessing the individual and cumulative effect of 46 type 2 diabetes related genetic variants. | Borglykke A et al. | 2012 | PloS one |
23349771 | Association study of 25 type 2 diabetes related Loci with measures of obesity in Indian sib pairs. | Gupta V et al. | 2013 | PloS one |
24012816 | The relationship between five widely-evaluated variants in CDKN2A/B and CDKAL1 genes and the risk of type 2 diabetes: a meta-analysis. | Peng F et al. | 2013 | Gene |
24185407 | CDKAL1 gene rs7756992 A/G polymorphism and type 2 diabetes mellitus: a meta-analysis of 62,567 subjects. | Li YY et al. | 2013 | Scientific reports |
24636221 | Contribution of CDKAL1 rs7756992 and IGF2BP2 rs4402960 polymorphisms in type 2 diabetes, diabetic complications, obesity risk and hypertension in the Tunisian population. | Lasram K et al. | 2015 | Journal of diabetes |
24637646 | Cross-sectional and longitudinal replication analyses of genome-wide association loci of type 2 diabetes in Han Chinese. | Zhao Q et al. | 2014 | PloS one |
24653947 | Cumulative Effect of Common Genetic Variants Predicts Incident Type 2 Diabetes: A Study of 21,183 Subjects from Three Large Prospective Cohorts. | Yang J et al. | 2011 | Epidemiology (Sunnyvale, Calif.) |
24760768 | Identification of a splicing variant that regulates type 2 diabetes risk factor CDKAL1 level by a coding-independent mechanism in human. | Zhou B et al. | 2014 | Human molecular genetics |
24845081 | Gene-lifestyle interaction and type 2 diabetes: the EPIC interact case-cohort study. | Langenberg C et al. | 2014 | PLoS medicine |
24898818 | Association analysis of IGF2BP2, KCNJ11, and CDKAL1 polymorphisms with type 2 diabetes mellitus in a Moroccan population: a case-control study and meta-analysis. | Benrahma H et al. | 2014 | Biochemical genetics |
24906951 | Type 2 diabetes susceptibility gene variants predispose to adult-onset autoimmune diabetes. | Andersen MK et al. | 2014 | Diabetologia |
24935819 | Exploring genetic variants predisposing to diabetes mellitus and their association with indicators of socioeconomic status. | Schmidt B et al. | 2014 | BMC public health |
25145545 | Does genetic heterogeneity account for the divergent risk of type 2 diabetes in South Asian and white European populations? | Sohani ZN et al. | 2014 | Diabetologia |
25288178 | The association between the rs6495309 polymorphism in CHRNA3 gene and lung cancer risk in Chinese: a meta-analysis. | Xiao M et al. | 2014 | Scientific reports |
25587982 | Cumulative effect and predictive value of genetic variants associated with type 2 diabetes in Han Chinese: a case-control study. | Qian Y et al. | 2015 | PloS one |
25634229 | A cautionary tale: the non-causal association between type 2 diabetes risk SNP, rs7756992, and levels of non-coding RNA, CDKAL1-v1. | Locke JM et al. | 2015 | Diabetologia |
25658847 | Do variants associated with susceptibility to pancreatic cancer and type 2 diabetes reciprocally affect risk? | Wu L et al. | 2015 | PloS one |
25723968 | Identification of Genetic Variants of Gestational Diabetes in South Indians. | Kanthimathi S et al. | 2015 | Diabetes technology & therapeutics |
25774817 | Genetics of type 2 diabetes-pitfalls and possibilities. | Prasad RB et al. | 2015 | Genes |
26042206 | Gene-gene and gene-environment interactions in the etiology of type 2 diabetes mellitus in the population of Hyderabad, India. | Uma Jyothi K et al. | 2015 | Meta gene |
26168825 | Positive Association Between Type 2 Diabetes Risk Alleles Near CDKAL1 and Reduced Birthweight in Chinese Han Individuals. | Sun XF et al. | 2015 | Chinese medical journal |
26240488 | Utilizing Genetic Predisposition Score in Predicting Risk of Type 2 Diabetes Mellitus Incidence: A Community-based Cohort Study on Middle-aged Koreans. | Park HY et al. | 2015 | Journal of Korean medical science |
26648684 | Update on genetics and diabetic retinopathy. | Hampton BM et al. | 2015 | Clinical ophthalmology (Auckland, N.Z.) |
26806836 | Genetic and clinical variables identify predictors for chronic kidney disease in type 2 diabetes. | Jiang G et al. | 2016 | Kidney international |
26873362 | Gene Polymorphism Association with Type 2 Diabetes and Related Gene-Gene and Gene-Environment Interactions in a Uyghur Population. | Xiao S et al. | 2016 | Medical science monitor |
26961502 | Variants in the FTO and CDKAL1 loci have recessive effects on risk of obesity and type 2 diabetes, respectively. | Wood AR et al. | 2016 | Diabetologia |
26983698 | Joint effects of diabetic-related genomic loci on the therapeutic efficacy of oral anti-diabetic drugs in Chinese type 2 diabetes patients. | Chen M et al. | 2016 | Scientific reports |
27139004 | A Common Susceptibility Gene for Type 2 Diabetes Is Associated with Drug Response to a DPP-4 Inhibitor: Pharmacogenomic Cohort in Okinawa Japan. | Osada UN et al. | 2016 | PloS one |
27275426 | The association analysis polymorphism of CDKAL1 and diabetic retinopathy in Chinese Han population. | Liu NJ et al. | 2016 | International journal of ophthalmology |
27281091 | Genetic variants associated with lean and obese type 2 diabetes in a Han Chinese population: A case-control study. | Kong X et al. | 2016 | Medicine |
27294943 | Association between IGF2BP2 Polymorphisms and Type 2 Diabetes Mellitus: A Case-Control Study and Meta-Analysis. | Rao P et al. | 2016 | International journal of environmental research and public health |
27377502 | Association of CDKAL1, CDKN2A/B & HHEX gene polymorphisms with type 2 diabetes mellitus in the population of Hyderabad, India. | Kommoju UJ et al. | 2016 | The Indian journal of medical research |
27383215 | Type 2 Diabetes Risk Allele Loci in the Qatari Population. | O'Beirne SL et al. | 2016 | PloS one |
27424552 | Genomics era and complex disorders: Implications of GWAS with special reference to coronary artery disease, type 2 diabetes mellitus, and cancers. | Pranavchand R et al. | 2016 | Journal of postgraduate medicine |
27588103 | IGF2BP2 rs11705701 polymorphisms are associated with prediabetes in a Chinese population: A population-based case-control study. | Han L et al. | 2016 | Experimental and therapeutic medicine |
27589775 | Validation of Type 2 Diabetes Risk Variants Identified by Genome-Wide Association Studies in Northern Han Chinese. | Rao P et al. | 2016 | International journal of environmental research and public health |
28717589 | Association of polymorphic markers of genes FTO, KCNJ11, CDKAL1, SLC30A8, and CDKN2B with type 2 diabetes mellitus in the Russian population. | Nikitin AG et al. | 2017 | PeerJ |
28738793 | Association between 28 single nucleotide polymorphisms and type 2 diabetes mellitus in the Kazakh population: a case-control study. | Sikhayeva N et al. | 2017 | BMC medical genetics |
28821857 | CDKAL1 rs7756992 is associated with diabetic retinopathy in a Chinese population with type 2 diabetes. | Peng D et al. | 2017 | Scientific reports |
29372795 | [The analysis of association between type 2 diabetes and polymorphic markers in the CDKAL1 gene and in the HHEX/IDE locus]. | Khodyrev DS et al. | 2016 | Genetika |
29871606 | Impact of KCNQ1, CDKN2A/2B, CDKAL1, HHEX, MTNR1B, SLC30A8, TCF7L2, and UBE2E2 on risk of developing type 2 diabetes in Thai population. | Plengvidhya N et al. | 2018 | BMC medical genetics |
30074174 | Meta-analysis of GABRB3 Gene Polymorphisms and Susceptibility to Autism Spectrum Disorder. | Noroozi R et al. | 2018 | Journal of molecular neuroscience |
30647622 | Common variants in TCF7L2 and CDKAL1 genes and risk of type 2 diabetes mellitus in Egyptians. | El-Lebedy D et al. | 2016 | Journal, genetic engineering & biotechnology |
32722593 | Coffee Consumption, Genetic Polymorphisms, and the Risk of Type 2 Diabetes Mellitus: A Pooled Analysis of Four Prospective Cohort Studies. | Kim AN et al. | 2020 | International journal of environmental research and public health |
32764395 | Dietary Protein and Fat Intake Affects Diabetes Risk with CDKAL1 Genetic Variants in Korean Adults. | Choi WJ et al. | 2020 | International journal of molecular sciences |
33965365 | The risk variant of CDKAL1 (rs7756992) impairs fasting glucose levels and insulin resistance improvements after a partial meal-replacement hypocaloric diet. | Izaola-Jáuregui O et al. | 2021 | Endocrinologia, diabetes y nutricion |
34131278 | Genetic polymorphisms associated with obesity in the Arab world: a systematic review. | Younes S et al. | 2021 | International journal of obesity (2005) |
34178825 | Polymorphic genetic markers and how they are associated with clinical and metabolic indicators of type 2 diabetes mellitus in the Kazakh population. | Benberin VV et al. | 2021 | Journal of diabetes and metabolic disorders |
34665019 | Pharmacogenetics of sulfonylurea-induced hypoglycemia in Type 2 diabetes patients: the SUCLINGEN study. | Loganadan NK et al. | 2021 | Pharmacogenomics |
34721291 | CDK5 Regulatory Subunit-Associated Protein 1-Like 1 Gene Polymorphisms and Gestational Diabetes Mellitus Risk: A Trial Sequential Meta-Analysis of 13,306 Subjects. | Yu XY et al. | 2021 | Frontiers in endocrinology |
34803393 | Pharmacogenomics and Personalized Medicine in Type 2 Diabetes Mellitus: Potential Implications for Clinical Practice. | Venkatachalapathy P et al. | 2021 | Pharmacogenomics and personalized medicine |
35090536 | CDKAL1 gene rs7756992 A/G and rs7754840 G/C polymorphisms are associated with gestational diabetes mellitus in a sample of Bangladeshi population: implication for future T2DM prophylaxis. | Amin USM et al. | 2022 | Diabetology & metabolic syndrome |
The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.
Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.