Name: rs10177639
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10177639

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:217951979 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.03161 (1653/52290, ALFA)
T=0.00004 (1/28256, 14KJPN)
T=0.1049 (672/6404, 1000G_30x) (+ 14 more)
T=0.0994 (498/5008, 1000G)
T=0.0324 (145/4480, Estonian)
T=0.0327 (126/3854, ALSPAC)
T=0.0310 (115/3708, TWINSUK)
T=0.0007 (2/2922, KOREAN)
T=0.0005 (1/1832, Korea1K)
T=0.028 (28/998, GoNL)
T=0.017 (10/600, NorthernSweden)
T=0.093 (20/216, Qatari)
T=0.009 (2/214, Vietnamese)
C=0.50 (26/52, SGDP_PRJ)
T=0.50 (26/52, SGDP_PRJ)
C=0.5 (3/6, Siberian)
T=0.5 (3/6, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TNS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	52290	C=0.96839	A=0.00000, T=0.03161
European	Sub	43686	C=0.97157	A=0.00000, T=0.02843
African	Sub	2336	C=0.9131	A=0.0000, T=0.0869
African Others	Sub	70	C=0.90	A=0.00, T=0.10
African American	Sub	2266	C=0.9135	A=0.0000, T=0.0865
Asian	Sub	126	C=1.000	A=0.000, T=0.000
East Asian	Sub	98	C=1.00	A=0.00, T=0.00
Other Asian	Sub	28	C=1.00	A=0.00, T=0.00
Latin American 1	Sub	142	C=0.993	A=0.000, T=0.007
Latin American 2	Sub	658	C=0.995	A=0.000, T=0.005
South Asian	Sub	106	C=1.000	A=0.000, T=0.000
Other	Sub	5236	C=0.9610	A=0.0000, T=0.0390

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	52290	C=0.96839	A=0.00000, T=0.03161
Allele Frequency Aggregator	European	Sub	43686	C=0.97157	A=0.00000, T=0.02843
Allele Frequency Aggregator	Other	Sub	5236	C=0.9610	A=0.0000, T=0.0390
Allele Frequency Aggregator	African	Sub	2336	C=0.9131	A=0.0000, T=0.0869
Allele Frequency Aggregator	Latin American 2	Sub	658	C=0.995	A=0.000, T=0.005
Allele Frequency Aggregator	Latin American 1	Sub	142	C=0.993	A=0.000, T=0.007
Allele Frequency Aggregator	Asian	Sub	126	C=1.000	A=0.000, T=0.000
Allele Frequency Aggregator	South Asian	Sub	106	C=1.000	A=0.000, T=0.000
14KJPN	JAPANESE	Study-wide	28256	C=0.99996	T=0.00004
1000Genomes_30x	Global	Study-wide	6404	C=0.8951	T=0.1049
1000Genomes_30x	African	Sub	1786	C=0.7161	T=0.2839
1000Genomes_30x	Europe	Sub	1266	C=0.9692	T=0.0308
1000Genomes_30x	South Asian	Sub	1202	C=0.9509	T=0.0491
1000Genomes_30x	East Asian	Sub	1170	C=0.9915	T=0.0085
1000Genomes_30x	American	Sub	980	C=0.942	T=0.058
1000Genomes	Global	Study-wide	5008	C=0.9006	T=0.0994
1000Genomes	African	Sub	1322	C=0.7186	T=0.2814
1000Genomes	East Asian	Sub	1008	C=0.9911	T=0.0089
1000Genomes	Europe	Sub	1006	C=0.9682	T=0.0318
1000Genomes	South Asian	Sub	978	C=0.956	T=0.044
1000Genomes	American	Sub	694	C=0.939	T=0.061
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.9676	T=0.0324
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.9673	T=0.0327
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.9690	T=0.0310
KOREAN population from KRGDB	KOREAN	Study-wide	2922	C=0.9993	T=0.0007
Korean Genome Project	KOREAN	Study-wide	1832	C=0.9995	T=0.0005
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.972	T=0.028
Northern Sweden	ACPOP	Study-wide	600	C=0.983	T=0.017
Qatari	Global	Study-wide	216	C=0.907	T=0.093
A Vietnamese Genetic Variation Database	Global	Study-wide	214	C=0.991	T=0.009
SGDP_PRJ	Global	Study-wide	52	C=0.50	T=0.50
Siberian	Global	Study-wide	6	C=0.5	T=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.217951979C>A
GRCh38.p14 chr 2	NC_000002.12:g.217951979C>T
GRCh37.p13 chr 2	NC_000002.11:g.218816702C>A
GRCh37.p13 chr 2	NC_000002.11:g.218816702C>T

Gene: TNS1, tensin 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TNS1 transcript variant 4	NM_001387777.1:c.186+2678… NM_001387777.1:c.186+26786G>T	N/A	Intron Variant
TNS1 transcript variant 2	NM_001308022.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant 3	NM_001308023.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant 1	NM_022648.7:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X4	XM_024453078.2:c.405+2678… XM_024453078.2:c.405+26786G>T	N/A	Intron Variant
TNS1 transcript variant X5	XM_024453079.2:c.186+2678… XM_024453079.2:c.186+26786G>T	N/A	Intron Variant
TNS1 transcript variant X24	XM_024453084.2:c.-190+267… XM_024453084.2:c.-190+26786G>T	N/A	Intron Variant
TNS1 transcript variant X1	XM_047445636.1:c.504+6340… XM_047445636.1:c.504+6340G>T	N/A	Intron Variant
TNS1 transcript variant X2	XM_047445637.1:c.309+2678… XM_047445637.1:c.309+26786G>T	N/A	Intron Variant
TNS1 transcript variant X3	XM_047445638.1:c.249+2678… XM_047445638.1:c.249+26786G>T	N/A	Intron Variant
TNS1 transcript variant X6	XM_047445639.1:c.249+2678… XM_047445639.1:c.249+26786G>T	N/A	Intron Variant
TNS1 transcript variant X8	XM_047445640.1:c.186+2678… XM_047445640.1:c.186+26786G>T	N/A	Intron Variant
TNS1 transcript variant X9	XM_047445641.1:c.405+2678… XM_047445641.1:c.405+26786G>T	N/A	Intron Variant
TNS1 transcript variant X10	XM_047445642.1:c.186+2678… XM_047445642.1:c.186+26786G>T	N/A	Intron Variant
TNS1 transcript variant X13	XM_047445644.1:c.249+2678… XM_047445644.1:c.249+26786G>T	N/A	Intron Variant
TNS1 transcript variant X14	XM_047445645.1:c.186+2678… XM_047445645.1:c.186+26786G>T	N/A	Intron Variant
TNS1 transcript variant X15	XM_047445646.1:c.-190+267… XM_047445646.1:c.-190+26786G>T	N/A	Intron Variant
TNS1 transcript variant X17	XM_017004813.3:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X18	XM_017004814.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X19	XM_017004815.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X7	XM_024453080.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X11	XM_024453081.2:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X12	XM_047445643.1:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X16	XM_047445647.1:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X20	XM_047445648.1:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X21	XM_047445649.1:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X22	XM_047445650.1:c.	N/A	Genic Upstream Transcript Variant
TNS1 transcript variant X23	XM_047445651.1:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	T
GRCh38.p14 chr 2	NC_000002.12:g.217951979=	NC_000002.12:g.217951979C>A	NC_000002.12:g.217951979C>T
GRCh37.p13 chr 2	NC_000002.11:g.218816702=	NC_000002.11:g.218816702C>A	NC_000002.11:g.218816702C>T
TNS1 transcript variant 4	NM_001387777.1:c.186+26786=	NM_001387777.1:c.186+26786G>T	NM_001387777.1:c.186+26786G>A
TNS1 transcript variant X4	XM_024453078.2:c.405+26786=	XM_024453078.2:c.405+26786G>T	XM_024453078.2:c.405+26786G>A
TNS1 transcript variant X5	XM_024453079.2:c.186+26786=	XM_024453079.2:c.186+26786G>T	XM_024453079.2:c.186+26786G>A
TNS1 transcript variant X24	XM_024453084.2:c.-190+26786=	XM_024453084.2:c.-190+26786G>T	XM_024453084.2:c.-190+26786G>A
TNS1 transcript variant X1	XM_047445636.1:c.504+6340=	XM_047445636.1:c.504+6340G>T	XM_047445636.1:c.504+6340G>A
TNS1 transcript variant X2	XM_047445637.1:c.309+26786=	XM_047445637.1:c.309+26786G>T	XM_047445637.1:c.309+26786G>A
TNS1 transcript variant X3	XM_047445638.1:c.249+26786=	XM_047445638.1:c.249+26786G>T	XM_047445638.1:c.249+26786G>A
TNS1 transcript variant X6	XM_047445639.1:c.249+26786=	XM_047445639.1:c.249+26786G>T	XM_047445639.1:c.249+26786G>A
TNS1 transcript variant X8	XM_047445640.1:c.186+26786=	XM_047445640.1:c.186+26786G>T	XM_047445640.1:c.186+26786G>A
TNS1 transcript variant X9	XM_047445641.1:c.405+26786=	XM_047445641.1:c.405+26786G>T	XM_047445641.1:c.405+26786G>A
TNS1 transcript variant X10	XM_047445642.1:c.186+26786=	XM_047445642.1:c.186+26786G>T	XM_047445642.1:c.186+26786G>A
TNS1 transcript variant X13	XM_047445644.1:c.249+26786=	XM_047445644.1:c.249+26786G>T	XM_047445644.1:c.249+26786G>A
TNS1 transcript variant X14	XM_047445645.1:c.186+26786=	XM_047445645.1:c.186+26786G>T	XM_047445645.1:c.186+26786G>A
TNS1 transcript variant X15	XM_047445646.1:c.-190+26786=	XM_047445646.1:c.-190+26786G>T	XM_047445646.1:c.-190+26786G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

71 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WUGSC_SSAHASNP	ss14041035	Dec 05, 2003 (119)
2	CSHL-HAPMAP	ss19425884	Feb 27, 2004 (120)
3	ABI	ss41802913	Mar 13, 2006 (126)
4	HGSV	ss81255561	Dec 14, 2007 (130)
5	HUMANGENOME_JCVI	ss96472670	Feb 04, 2009 (130)
6	1000GENOMES	ss111667290	Jan 25, 2009 (130)
7	ILLUMINA-UK	ss118081612	Feb 14, 2009 (130)
8	ENSEMBL	ss142800844	Dec 01, 2009 (131)
9	COMPLETE_GENOMICS	ss165502882	Jul 04, 2010 (132)
10	1000GENOMES	ss219818310	Jul 14, 2010 (132)
11	1000GENOMES	ss231590491	Jul 14, 2010 (132)
12	PJP	ss292489388	May 09, 2011 (134)
13	ILLUMINA	ss480200955	May 04, 2012 (137)
14	ILLUMINA	ss484015030	May 04, 2012 (137)
15	ILLUMINA	ss533603980	Sep 08, 2015 (146)
16	TISHKOFF	ss556225710	Apr 25, 2013 (138)
17	SSMP	ss649891790	Apr 25, 2013 (138)
18	ILLUMINA	ss779722753	Sep 08, 2015 (146)
19	ILLUMINA	ss781172063	Sep 08, 2015 (146)
20	ILLUMINA	ss835197319	Sep 08, 2015 (146)
21	EVA-GONL	ss977970275	Aug 21, 2014 (142)
22	JMKIDD_LAB	ss1069948840	Aug 21, 2014 (142)
23	1000GENOMES	ss1301681580	Aug 21, 2014 (142)
24	DDI	ss1428914003	Apr 01, 2015 (144)
25	EVA_DECODE	ss1587425562	Apr 01, 2015 (144)
26	EVA_UK10K_ALSPAC	ss1605813306	Apr 01, 2015 (144)
27	EVA_UK10K_TWINSUK	ss1648807339	Apr 01, 2015 (144)
28	HAMMER_LAB	ss1798373274	Sep 08, 2015 (146)
29	WEILL_CORNELL_DGM	ss1921215080	Feb 12, 2016 (147)
30	GENOMED	ss1969027549	Jul 19, 2016 (147)
31	JJLAB	ss2021156100	Sep 14, 2016 (149)
32	USC_VALOUEV	ss2149217858	Dec 20, 2016 (150)
33	HUMAN_LONGEVITY	ss2239225831	Dec 20, 2016 (150)
34	ILLUMINA	ss2633740904	Nov 08, 2017 (151)
35	GNOMAD	ss2786431379	Nov 08, 2017 (151)
36	SWEGEN	ss2991372301	Nov 08, 2017 (151)
37	ILLUMINA	ss3022069898	Nov 08, 2017 (151)
38	CSHL	ss3344745661	Nov 08, 2017 (151)
39	ILLUMINA	ss3628288240	Oct 11, 2018 (152)
40	ILLUMINA	ss3631700874	Oct 11, 2018 (152)
41	ILLUMINA	ss3642155870	Oct 11, 2018 (152)
42	URBANLAB	ss3647276477	Oct 11, 2018 (152)
43	ILLUMINA	ss3652520837	Oct 11, 2018 (152)
44	EGCUT_WGS	ss3659268304	Jul 13, 2019 (153)
45	EVA_DECODE	ss3706040307	Jul 13, 2019 (153)
46	ILLUMINA	ss3725872920	Jul 13, 2019 (153)
47	ACPOP	ss3729380439	Jul 13, 2019 (153)
48	ILLUMINA	ss3744486929	Jul 13, 2019 (153)
49	EVA	ss3758094949	Jul 13, 2019 (153)
50	KHV_HUMAN_GENOMES	ss3802459328	Jul 13, 2019 (153)
51	EVA	ss3827510846	Apr 25, 2020 (154)
52	SGDP_PRJ	ss3854613412	Apr 25, 2020 (154)
53	KRGDB	ss3900333468	Apr 25, 2020 (154)
54	KOGIC	ss3950100787	Apr 25, 2020 (154)
55	TOPMED	ss4544962014	Apr 26, 2021 (155)
56	TOPMED	ss4544962015	Apr 26, 2021 (155)
57	EVA	ss5237312099	Apr 26, 2021 (155)
58	1000G_HIGH_COVERAGE	ss5252064814	Oct 13, 2022 (156)
59	EVA	ss5336094861	Oct 13, 2022 (156)
60	HUGCELL_USP	ss5451672489	Oct 13, 2022 (156)
61	EVA	ss5506800492	Oct 13, 2022 (156)
62	1000G_HIGH_COVERAGE	ss5529429183	Oct 13, 2022 (156)
63	SANFORD_IMAGENETICS	ss5624472095	Oct 13, 2022 (156)
64	SANFORD_IMAGENETICS	ss5630971459	Oct 13, 2022 (156)
65	TOMMO_GENOMICS	ss5687431173	Oct 13, 2022 (156)
66	EVA	ss5821604377	Oct 13, 2022 (156)
67	EVA	ss5847205447	Oct 13, 2022 (156)
68	EVA	ss5852955457	Oct 13, 2022 (156)
69	EVA	ss5934743867	Oct 13, 2022 (156)
70	EVA	ss5957228030	Oct 13, 2022 (156)
71	EVA	ss5979599977	Oct 13, 2022 (156)
72	1000Genomes	NC_000002.11 - 218816702	Oct 11, 2018 (152)
73	1000Genomes_30x	NC_000002.12 - 217951979	Oct 13, 2022 (156)
74	The Avon Longitudinal Study of Parents and Children	NC_000002.11 - 218816702	Oct 11, 2018 (152)
75	Genetic variation in the Estonian population	NC_000002.11 - 218816702	Oct 11, 2018 (152)
76	gnomAD - Genomes Submission ignored due to conflicting rows: Row 91187083 (NC_000002.12:217951978:C:A 1/140256) Row 91187084 (NC_000002.12:217951978:C:T 14103/140224)	-	Apr 26, 2021 (155)
77	gnomAD - Genomes Submission ignored due to conflicting rows: Row 91187083 (NC_000002.12:217951978:C:A 1/140256) Row 91187084 (NC_000002.12:217951978:C:T 14103/140224)	-	Apr 26, 2021 (155)
78	Genome of the Netherlands Release 5	NC_000002.11 - 218816702	Apr 25, 2020 (154)
79	KOREAN population from KRGDB	NC_000002.11 - 218816702	Apr 25, 2020 (154)
80	Korean Genome Project	NC_000002.12 - 217951979	Apr 25, 2020 (154)
81	Northern Sweden	NC_000002.11 - 218816702	Jul 13, 2019 (153)
82	Qatari	NC_000002.11 - 218816702	Apr 25, 2020 (154)
83	SGDP_PRJ	NC_000002.11 - 218816702	Apr 25, 2020 (154)
84	Siberian	NC_000002.11 - 218816702	Apr 25, 2020 (154)
85	14KJPN	NC_000002.12 - 217951979	Oct 13, 2022 (156)
86	TopMed Submission ignored due to conflicting rows: Row 348784893 (NC_000002.12:217951978:C:A 1/264690) Row 348784894 (NC_000002.12:217951978:C:T 27266/264690)	-	Apr 26, 2021 (155)
87	TopMed Submission ignored due to conflicting rows: Row 348784893 (NC_000002.12:217951978:C:A 1/264690) Row 348784894 (NC_000002.12:217951978:C:T 27266/264690)	-	Apr 26, 2021 (155)
88	UK 10K study - Twins	NC_000002.11 - 218816702	Oct 11, 2018 (152)
89	A Vietnamese Genetic Variation Database	NC_000002.11 - 218816702	Jul 13, 2019 (153)
90	ALFA	NC_000002.12 - 217951979	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57072995	May 23, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
7329635458, ss4544962014	NC_000002.12:217951978:C:A	NC_000002.12:217951978:C:A	(self)
ss81255561	NC_000002.9:218642207:C:T	NC_000002.12:217951978:C:T	(self)
ss111667290, ss118081612, ss165502882, ss292489388, ss484015030, ss1587425562	NC_000002.10:218524946:C:T	NC_000002.12:217951978:C:T	(self)
12788161, 7073427, 5006552, 3102500, 7510862, 2665304, 3257010, 6630392, 1734212, 7073427, 1537700, ss219818310, ss231590491, ss480200955, ss533603980, ss556225710, ss649891790, ss779722753, ss781172063, ss835197319, ss977970275, ss1069948840, ss1301681580, ss1428914003, ss1605813306, ss1648807339, ss1798373274, ss1921215080, ss1969027549, ss2021156100, ss2149217858, ss2633740904, ss2786431379, ss2991372301, ss3022069898, ss3344745661, ss3628288240, ss3631700874, ss3642155870, ss3652520837, ss3659268304, ss3729380439, ss3744486929, ss3758094949, ss3827510846, ss3854613412, ss3900333468, ss5237312099, ss5336094861, ss5506800492, ss5624472095, ss5630971459, ss5821604377, ss5847205447, ss5957228030, ss5979599977	NC_000002.11:218816701:C:T	NC_000002.12:217951978:C:T	(self)
16955118, 6478788, 21268277, 7329635458, ss2239225831, ss3647276477, ss3706040307, ss3725872920, ss3802459328, ss3950100787, ss4544962015, ss5252064814, ss5451672489, ss5529429183, ss5687431173, ss5852955457, ss5934743867	NC_000002.12:217951978:C:T	NC_000002.12:217951978:C:T	(self)
ss14041035, ss19425884	NT_005403.14:69026116:C:T	NC_000002.12:217951978:C:T	(self)
ss41802913, ss96472670, ss142800844	NT_005403.17:69026119:C:T	NC_000002.12:217951978:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10177639

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10177639