Name: rs5801387
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs5801387

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr12:120540131-120540142 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT / dupTT / dup(…
delTT / delT / dupT / dupTT / dup(T)₄
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.4823 (2854/5918, ALFA)
(T)₁₂=0.3073 (1539/5008, 1000G)
(T)₁₂=0.3225 (1243/3854, ALSPAC) (+ 3 more)
(T)₁₂=0.3247 (1204/3708, TWINSUK)
(T)₁₂=0.329 (197/598, NorthernSweden)
(T)₁₂=0.33 (13/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: RNF10 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	5918	TTTTTTTTTTTT=0.5177	TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.4823, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000
European	Sub	5576	TTTTTTTTTTTT=0.4887	TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.5113, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000
African	Sub	108	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000
African Others	Sub	4	TTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0
African American	Sub	104	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000
Asian	Sub	14	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00
East Asian	Sub	12	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00
Other Asian	Sub	2	TTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0
Latin American 1	Sub	28	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00
Latin American 2	Sub	110	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000
South Asian	Sub	20	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00
Other	Sub	62	TTTTTTTTTTTT=0.95	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.05, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	5918	(T)₁₂=0.5177	delTT=0.0000, delT=0.4823, dupT=0.0000, dupTT=0.0000
Allele Frequency Aggregator	European	Sub	5576	(T)₁₂=0.4887	delTT=0.0000, delT=0.5113, dupT=0.0000, dupTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	110	(T)₁₂=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	African	Sub	108	(T)₁₂=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	62	(T)₁₂=0.95	delTT=0.00, delT=0.05, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	28	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	20	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Asian	Sub	14	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₂=0.3073	delT=0.6927
1000Genomes	African	Sub	1322	(T)₁₂=0.1778	delT=0.8222
1000Genomes	East Asian	Sub	1008	(T)₁₂=0.3185	delT=0.6815
1000Genomes	Europe	Sub	1006	(T)₁₂=0.3509	delT=0.6491
1000Genomes	South Asian	Sub	978	(T)₁₂=0.357	delT=0.643
1000Genomes	American	Sub	694	(T)₁₂=0.405	delT=0.595
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₂=0.3225	delT=0.6775
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₂=0.3247	delT=0.6753
Northern Sweden	ACPOP	Study-wide	598	(T)₁₂=0.329	delT=0.671
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₂=0.33	delT=0.68

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 12	NC_000012.12:g.120540141_120540142del
GRCh38.p14 chr 12	NC_000012.12:g.120540142del
GRCh38.p14 chr 12	NC_000012.12:g.120540142dup
GRCh38.p14 chr 12	NC_000012.12:g.120540141_120540142dup
GRCh38.p14 chr 12	NC_000012.12:g.120540139_120540142dup
GRCh37.p13 chr 12	NC_000012.11:g.120977944_120977945del
GRCh37.p13 chr 12	NC_000012.11:g.120977945del
GRCh37.p13 chr 12	NC_000012.11:g.120977945dup
GRCh37.p13 chr 12	NC_000012.11:g.120977944_120977945dup
GRCh37.p13 chr 12	NC_000012.11:g.120977942_120977945dup

Gene: RNF10, ring finger protein 10 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
RNF10 transcript variant 2	NM_001330474.2:c.157+5173… NM_001330474.2:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant 1	NM_014868.5:c.157+5173_15… NM_014868.5:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X1	XM_005254013.3:c.7+673_7+… XM_005254013.3:c.7+673_7+674del	N/A	Intron Variant
RNF10 transcript variant X2	XM_017020282.2:c.7+673_7+… XM_017020282.2:c.7+673_7+674del	N/A	Intron Variant
RNF10 transcript variant X5	XM_017020283.3:c.157+5173… XM_017020283.3:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X3	XM_047429937.1:c.157+5173… XM_047429937.1:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X4	XM_047429938.1:c.157+5173… XM_047429938.1:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X6	XM_047429939.1:c.157+5173… XM_047429939.1:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X7	XM_047429940.1:c.157+5173… XM_047429940.1:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X8	XM_047429941.1:c.157+5173… XM_047429941.1:c.157+5173_157+5174del	N/A	Intron Variant
RNF10 transcript variant X9	XM_047429942.1:c.157+5173… XM_047429942.1:c.157+5173_157+5174del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₂=	delTT	delT	dupT	dupTT	dup(T)₄
GRCh38.p14 chr 12	NC_000012.12:g.120540131_120540142=	NC_000012.12:g.120540141_120540142del	NC_000012.12:g.120540142del	NC_000012.12:g.120540142dup	NC_000012.12:g.120540141_120540142dup	NC_000012.12:g.120540139_120540142dup
GRCh37.p13 chr 12	NC_000012.11:g.120977934_120977945=	NC_000012.11:g.120977944_120977945del	NC_000012.11:g.120977945del	NC_000012.11:g.120977945dup	NC_000012.11:g.120977944_120977945dup	NC_000012.11:g.120977942_120977945dup
RNF10 transcript variant 2	NM_001330474.2:c.157+5163=	NM_001330474.2:c.157+5173_157+5174del	NM_001330474.2:c.157+5174del	NM_001330474.2:c.157+5174dup	NM_001330474.2:c.157+5173_157+5174dup	NM_001330474.2:c.157+5171_157+5174dup
RNF10 transcript variant 1	NM_014868.4:c.157+5163=	NM_014868.4:c.157+5173_157+5174del	NM_014868.4:c.157+5174del	NM_014868.4:c.157+5174dup	NM_014868.4:c.157+5173_157+5174dup	NM_014868.4:c.157+5171_157+5174dup
RNF10 transcript variant 1	NM_014868.5:c.157+5163=	NM_014868.5:c.157+5173_157+5174del	NM_014868.5:c.157+5174del	NM_014868.5:c.157+5174dup	NM_014868.5:c.157+5173_157+5174dup	NM_014868.5:c.157+5171_157+5174dup
RNF10 transcript variant X1	XM_005254010.1:c.232+5163=	XM_005254010.1:c.232+5173_232+5174del	XM_005254010.1:c.232+5174del	XM_005254010.1:c.232+5174dup	XM_005254010.1:c.232+5173_232+5174dup	XM_005254010.1:c.232+5171_232+5174dup
RNF10 transcript variant X2	XM_005254011.1:c.157+5163=	XM_005254011.1:c.157+5173_157+5174del	XM_005254011.1:c.157+5174del	XM_005254011.1:c.157+5174dup	XM_005254011.1:c.157+5173_157+5174dup	XM_005254011.1:c.157+5171_157+5174dup
RNF10 transcript variant X3	XM_005254012.1:c.157+5163=	XM_005254012.1:c.157+5173_157+5174del	XM_005254012.1:c.157+5174del	XM_005254012.1:c.157+5174dup	XM_005254012.1:c.157+5173_157+5174dup	XM_005254012.1:c.157+5171_157+5174dup
RNF10 transcript variant X2	XM_005254013.1:c.7+663=	XM_005254013.1:c.7+673_7+674del	XM_005254013.1:c.7+674del	XM_005254013.1:c.7+674dup	XM_005254013.1:c.7+673_7+674dup	XM_005254013.1:c.7+671_7+674dup
RNF10 transcript variant X1	XM_005254013.3:c.7+663=	XM_005254013.3:c.7+673_7+674del	XM_005254013.3:c.7+674del	XM_005254013.3:c.7+674dup	XM_005254013.3:c.7+673_7+674dup	XM_005254013.3:c.7+671_7+674dup
RNF10 transcript variant X5	XM_005254014.1:c.157+5163=	XM_005254014.1:c.157+5173_157+5174del	XM_005254014.1:c.157+5174del	XM_005254014.1:c.157+5174dup	XM_005254014.1:c.157+5173_157+5174dup	XM_005254014.1:c.157+5171_157+5174dup
RNF10 transcript variant X2	XM_017020282.2:c.7+663=	XM_017020282.2:c.7+673_7+674del	XM_017020282.2:c.7+674del	XM_017020282.2:c.7+674dup	XM_017020282.2:c.7+673_7+674dup	XM_017020282.2:c.7+671_7+674dup
RNF10 transcript variant X5	XM_017020283.3:c.157+5163=	XM_017020283.3:c.157+5173_157+5174del	XM_017020283.3:c.157+5174del	XM_017020283.3:c.157+5174dup	XM_017020283.3:c.157+5173_157+5174dup	XM_017020283.3:c.157+5171_157+5174dup
RNF10 transcript variant X3	XM_047429937.1:c.157+5163=	XM_047429937.1:c.157+5173_157+5174del	XM_047429937.1:c.157+5174del	XM_047429937.1:c.157+5174dup	XM_047429937.1:c.157+5173_157+5174dup	XM_047429937.1:c.157+5171_157+5174dup
RNF10 transcript variant X4	XM_047429938.1:c.157+5163=	XM_047429938.1:c.157+5173_157+5174del	XM_047429938.1:c.157+5174del	XM_047429938.1:c.157+5174dup	XM_047429938.1:c.157+5173_157+5174dup	XM_047429938.1:c.157+5171_157+5174dup
RNF10 transcript variant X6	XM_047429939.1:c.157+5163=	XM_047429939.1:c.157+5173_157+5174del	XM_047429939.1:c.157+5174del	XM_047429939.1:c.157+5174dup	XM_047429939.1:c.157+5173_157+5174dup	XM_047429939.1:c.157+5171_157+5174dup
RNF10 transcript variant X7	XM_047429940.1:c.157+5163=	XM_047429940.1:c.157+5173_157+5174del	XM_047429940.1:c.157+5174del	XM_047429940.1:c.157+5174dup	XM_047429940.1:c.157+5173_157+5174dup	XM_047429940.1:c.157+5171_157+5174dup
RNF10 transcript variant X8	XM_047429941.1:c.157+5163=	XM_047429941.1:c.157+5173_157+5174del	XM_047429941.1:c.157+5174del	XM_047429941.1:c.157+5174dup	XM_047429941.1:c.157+5173_157+5174dup	XM_047429941.1:c.157+5171_157+5174dup
RNF10 transcript variant X9	XM_047429942.1:c.157+5163=	XM_047429942.1:c.157+5173_157+5174del	XM_047429942.1:c.157+5174del	XM_047429942.1:c.157+5174dup	XM_047429942.1:c.157+5173_157+5174dup	XM_047429942.1:c.157+5171_157+5174dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

54 SubSNP, 14 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40129969	Mar 14, 2006 (137)
2	HUMANGENOME_JCVI	ss95609296	Feb 04, 2009 (130)
3	HUMANGENOME_JCVI	ss97277124	Feb 03, 2009 (137)
4	BCMHGSC_JDW	ss103540370	Mar 15, 2016 (147)
5	BL	ss256138036	May 09, 2011 (137)
6	GMI	ss287898868	May 09, 2011 (137)
7	GMI	ss289156168	May 04, 2012 (137)
8	PJP	ss294778057	May 09, 2011 (137)
9	PJP	ss294778058	May 09, 2011 (134)
10	SSMP	ss664095530	Apr 01, 2015 (144)
11	1000GENOMES	ss1372707673	Aug 21, 2014 (142)
12	EVA_GENOME_DK	ss1574577861	Apr 01, 2015 (144)
13	EVA_UK10K_ALSPAC	ss1707651328	Apr 01, 2015 (144)
14	EVA_UK10K_TWINSUK	ss1707651672	Apr 01, 2015 (144)
15	HAMMER_LAB	ss1807450239	Sep 08, 2015 (146)
16	JJLAB	ss2031162023	Sep 14, 2016 (149)
17	SWEGEN	ss3010459004	Nov 08, 2017 (151)
18	MCHAISSO	ss3063748769	Nov 08, 2017 (151)
19	MCHAISSO	ss3064578829	Nov 08, 2017 (151)
20	MCHAISSO	ss3065501173	Nov 08, 2017 (151)
21	BIOINF_KMB_FNS_UNIBA	ss3645280075	Oct 12, 2018 (152)
22	BIOINF_KMB_FNS_UNIBA	ss3645280076	Oct 12, 2018 (152)
23	URBANLAB	ss3649935100	Oct 12, 2018 (152)
24	EVA_DECODE	ss3694604638	Jul 13, 2019 (153)
25	EVA_DECODE	ss3694604639	Jul 13, 2019 (153)
26	EVA_DECODE	ss3694604640	Jul 13, 2019 (153)
27	ACPOP	ss3739441694	Jul 13, 2019 (153)
28	PACBIO	ss3787354453	Jul 13, 2019 (153)
29	PACBIO	ss3787354454	Jul 13, 2019 (153)
30	PACBIO	ss3792433459	Jul 13, 2019 (153)
31	PACBIO	ss3797316610	Jul 13, 2019 (153)
32	KHV_HUMAN_GENOMES	ss3816377313	Jul 13, 2019 (153)
33	EVA	ss3833360969	Apr 27, 2020 (154)
34	EVA	ss3840251377	Apr 27, 2020 (154)
35	EVA	ss3845740324	Apr 27, 2020 (154)
36	GNOMAD	ss4260193296	Apr 26, 2021 (155)
37	GNOMAD	ss4260193297	Apr 26, 2021 (155)
38	GNOMAD	ss4260193298	Apr 26, 2021 (155)
39	GNOMAD	ss4260193299	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5208479733	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5208479734	Apr 26, 2021 (155)
42	1000G_HIGH_COVERAGE	ss5292473061	Oct 16, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5292473062	Oct 16, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5292473063	Oct 16, 2022 (156)
45	HUGCELL_USP	ss5487054032	Oct 16, 2022 (156)
46	HUGCELL_USP	ss5487054033	Oct 16, 2022 (156)
47	EVA	ss5510863304	Oct 16, 2022 (156)
48	TOMMO_GENOMICS	ss5758898701	Oct 16, 2022 (156)
49	TOMMO_GENOMICS	ss5758898702	Oct 16, 2022 (156)
50	YY_MCH	ss5813704459	Oct 16, 2022 (156)
51	EVA	ss5838606935	Oct 16, 2022 (156)
52	EVA	ss5850576640	Oct 16, 2022 (156)
53	EVA	ss5906296774	Oct 16, 2022 (156)
54	EVA	ss5945503368	Oct 16, 2022 (156)
55	1000Genomes	NC_000012.11 - 120977934	Oct 12, 2018 (152)
56	The Avon Longitudinal Study of Parents and Children	NC_000012.11 - 120977934	Oct 12, 2018 (152)
57	The Danish reference pan genome	NC_000012.11 - 120977934	Apr 27, 2020 (154)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 421296841 (NC_000012.12:120540130::T 430/131684) Row 421296842 (NC_000012.12:120540130::TTTT 1/131710) Row 421296843 (NC_000012.12:120540130:T: 91952/131540)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 421296841 (NC_000012.12:120540130::T 430/131684) Row 421296842 (NC_000012.12:120540130::TTTT 1/131710) Row 421296843 (NC_000012.12:120540130:T: 91952/131540)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 421296841 (NC_000012.12:120540130::T 430/131684) Row 421296842 (NC_000012.12:120540130::TTTT 1/131710) Row 421296843 (NC_000012.12:120540130:T: 91952/131540)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 421296841 (NC_000012.12:120540130::T 430/131684) Row 421296842 (NC_000012.12:120540130::TTTT 1/131710) Row 421296843 (NC_000012.12:120540130:T: 91952/131540)...	-	Apr 26, 2021 (155)
62	Northern Sweden	NC_000012.11 - 120977934	Jul 13, 2019 (153)
63	8.3KJPN Submission ignored due to conflicting rows: Row 66449040 (NC_000012.11:120977933:T: 10727/16758) Row 66449041 (NC_000012.11:120977933::T 10/16758)	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 66449040 (NC_000012.11:120977933:T: 10727/16758) Row 66449041 (NC_000012.11:120977933::T 10/16758)	-	Apr 26, 2021 (155)
65	14KJPN Submission ignored due to conflicting rows: Row 92735805 (NC_000012.12:120540130:T: 18078/28256) Row 92735806 (NC_000012.12:120540130::T 14/28256)	-	Oct 16, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 92735805 (NC_000012.12:120540130:T: 18078/28256) Row 92735806 (NC_000012.12:120540130::T 14/28256)	-	Oct 16, 2022 (156)
67	UK 10K study - Twins	NC_000012.11 - 120977934	Oct 12, 2018 (152)
68	ALFA	NC_000012.12 - 120540131	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs35306323	May 11, 2012 (137)
rs141365459	May 04, 2012 (137)
rs370213743	May 13, 2013 (138)
rs66865336	Feb 26, 2009 (130)
rs66865337	Feb 26, 2009 (130)
rs78614743	Oct 16, 2011 (136)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3787354453	NC_000012.11:120977933:TT:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTT	(self)
ss3645280076, ss3694604638, ss4260193299, ss5292473063	NC_000012.12:120540130:TT:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTT	(self)
1545721108	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTT	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTT	(self)
ss103540370	NT_009775.17:11554473:TT:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTT	(self)
ss256138036, ss289156168, ss294778057	NC_000012.10:119462316:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss294778058	NC_000012.10:119462327:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
59728464, 33177018, 383654, 12726559, 33177018, ss664095530, ss1372707673, ss1574577861, ss1707651328, ss1707651672, ss1807450239, ss2031162023, ss3010459004, ss3739441694, ss3787354454, ss3792433459, ss3797316610, ss3833360969, ss3840251377, ss5208479733, ss5838606935, ss5945503368	NC_000012.11:120977933:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3063748769, ss3064578829, ss3065501173, ss3645280075, ss3649935100, ss3816377313, ss3845740324, ss4260193298, ss5292473061, ss5487054032, ss5758898701, ss5813704459, ss5850576640, ss5906296774	NC_000012.12:120540130:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
1545721108	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3694604639	NC_000012.12:120540131:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss40129969, ss97277124, ss287898868	NT_009775.17:11554463:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss95609296	NT_009775.17:11554474:T:	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss5208479734, ss5510863304	NC_000012.11:120977933::T	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4260193296, ss5292473062, ss5487054033, ss5758898702	NC_000012.12:120540130::T	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
1545721108	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3694604640	NC_000012.12:120540132::T	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
1545721108	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4260193297	NC_000012.12:120540130::TTTT	NC_000012.12:120540130:TTTTTTTTTTT… NC_000012.12:120540130:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs5801387

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs5801387