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1.
IDENTIFICATION OF THE RATE-DETERMINING STEP OF tRNA-GUANINE TRANSGLYCOSYLASE FROM E. coli
George A. Garcia, Stephanie M. Chervin, Jeffrey D. Kittendorf
Biochemistry. Author manuscript; available in PMC 2010 Dec 1.
Published in final edited form as: Biochemistry. 2009 Dec 1; 48(47): 11243–11251. doi: 10.1021/bi901501a
PMCID:
PMC2789984
ArticlePDF–1.4M
2.
tRNA–guanine transglycosylase from E. coli: a ping-pong kinetic mechanism is consistent with nucleophilic catalysis
DeeAnne M. Goodenough-Lashua, George A. Garcia
Bioorg Chem. Author manuscript; available in PMC 2009 Nov 27.
Published in final edited form as: Bioorg Chem. 2003 Aug; 31(4): 331–344. doi: 10.1016/S0045-2068(03)00069-5
PMCID:
PMC2784677
ArticlePDF–2.6M
3.
THE ROLE OF ASPARTATE 143 IN E. coli tRNA-GUANINE TRANSGLYCOSYLASE: ALTERATION OF HETEROCYCLIC SUBSTRATE SPECIFICITY
Katherine Abold Todorov, George A. Garcia
Biochemistry. Author manuscript; available in PMC 2008 Sep 12.
Published in final edited form as: Biochemistry. 2006 Jan 17; 45(2): 617–625. doi: 10.1021/bi051863d
PMCID:
PMC2533737
ArticlePDF–2.0M
4.
Site-specific modification of Shigella flexneri virF mRNA by tRNA-guanine transglycosylase in vitro
Julie K. Hurt, Sureyya Olgen, George A. Garcia
Nucleic Acids Res. 2007 Jul; 35(14): 4905–4913. Published online 2007 Jul 10. doi: 10.1093/nar/gkm473
PMCID:
PMC1950534
ArticlePDF–2.5M
5.
tRNA recognition by tRNA-guanine transglycosylase from Escherichia coli: the role of U33 in U-G-U sequence recognition.
S T Nonekowski, G A Garcia
RNA. 2001 Oct; 7(10): 1432–1441.
PMCID:
PMC1370187
SummaryPDF–488K
6.
tRNA-guanine transglycosylase from Escherichia coli: recognition of noncognate-cognate chimeric tRNA and discovery of a novel recognition site within the TpsiC arm of tRNA(Phe).
F L Kung, S Nonekowski, G A Garcia
RNA. 2000 Feb; 6(2): 233–244. doi: 10.1017/s135583820099191x
PMCID:
PMC1369909
SummaryPDF–588K
7.
The Role of Aspartic Acid 143 in E. coli tRNA-Guanine Transglycosylase: Insights from Mutagenesis Studies and Computational Modeling
Katherine Abold Todorov, Xiao-Jian Tan, Susanne T. Nonekowski, George A. Garcia, Heather A. Carlson
Biophys J. 2005 Sep; 89(3): 1965–1977. Published online 2005 Jun 10. doi: 10.1529/biophysj.105.059576
PMCID:
PMC1366699
ArticlePDF–318K
8.
Queuosine modification in tRNA and expression of the nitrate reductase in Escherichia coli.
G Jänel, U Michelsen, S Nishimura, H Kersten
EMBO J. 1984 Jul; 3(7): 1603–1608. doi: 10.1002/j.1460-2075.1984.tb02017.x
PMCID:
PMC557565
SummaryPage BrowsePDF–1.1M
9.
Sequence analysis and overexpression of the Zymomonas mobilis tgt gene encoding tRNA-guanine transglycosylase: purification and biochemical characterization of the enzyme.
K Reuter, R Ficner
J Bacteriol. 1995 Sep; 177(18): 5284–5288. doi: 10.1128/jb.177.18.5284-5288.1995
PMCID:
PMC177320
SummaryPDF–226K
10.
DIFFERENTIAL HETEROCYCLIC SUBSTRATE RECOGNITION BY, AND PTERIDINE INHIBITION OF E. coli AND HUMAN tRNA-GUANINE TRANSGLYCOSYLASES
C. Eric Thomas, Yi-Chen Chen, George A. Garcia
Biochem Biophys Res Commun. Author manuscript; available in PMC 2012 Jun 24.
Published in final edited form as: Biochem Biophys Res Commun. 2011 Jun 24; 410(1): 34–39. Published online 2011 May 24. doi: 10.1016/j.bbrc.2011.05.100
PMCID:
PMC3124622
ArticlePDF–857K
11.
Mutations in the Escherichia coli fnr and tgt genes: control of molybdate reductase activity and the cytochrome d complex by fnr.
B Frey, G Jänel, U Michelsen, H Kersten
J Bacteriol. 1989 Mar; 171(3): 1524–1530. doi: 10.1128/jb.171.3.1524-1530.1989
PMCID:
PMC209776
SummaryPage BrowsePDF–1.3M
12.
Evolution of eukaryal tRNA-guanine transglycosylase: insight gained from the heterocyclic substrate recognition by the wild-type and mutant human and Escherichia coli tRNA-guanine transglycosylases
Yi-Chen Chen, Allen F. Brooks, DeeAnne M. Goodenough-Lashua, Jeffrey D. Kittendorf, Hollis D. Showalter, George A. Garcia
Nucleic Acids Res. 2011 Apr; 39(7): 2834–2844. Published online 2010 Dec 3. doi: 10.1093/nar/gkq1188
PMCID:
PMC3074131
ArticlePDF–2.0M
13.
The promoter of the tgt/sec operon in Escherichia coli is preceded by an upstream activation sequence that contains a high affinity FIS binding site.
R K Slany, H Kersten
Nucleic Acids Res. 1992 Aug 25; 20(16): 4193–4198. doi: 10.1093/nar/20.16.4193
PMCID:
PMC334125
SummaryPage BrowsePDF–1.5M
14.
Transfer RNA modifications that alter +1 frameshifting in general fail to affect −1 frameshifting
JAUNIUS URBONAVIC̆IUS, GUILLAUME STAHL, JÉRÔME M.B. DURAND, SAMIA N. BEN SALEM, QIANG QIAN, PHILIP J. FARABAUGH, GLENN R. BJÖRK
RNA. 2003 Jun; 9(6): 760–768. doi: 10.1261/rna.5210803
PMCID:
PMC1370442
ArticlePDF–197K
15.
The secD locus of E.coli codes for two membrane proteins required for protein export.
C Gardel, K Johnson, A Jacq, J Beckwith
EMBO J. 1990 Oct; 9(10): 3209–3216. doi: 10.1002/j.1460-2075.1990.tb07519.x
Correction in:
EMBO J. 1990 Dec; 9(12): 4205–4206.
PMCID:
PMC552051
SummaryPage BrowsePDF–1.7M
16.
Structure and organization of Escherichia coli genes involved in biosynthesis of the deazaguanine derivative queuine, a nutrient factor for eukaryotes.
K Reuter, R Slany, F Ullrich, H Kersten
J Bacteriol. 1991 Apr; 173(7): 2256–2264. doi: 10.1128/jb.173.7.2256-2264.1991
PMCID:
PMC207776
SummaryPage BrowsePDF–2.2M
17.
Genetic and molecular characterization of the Escherichia coli secD operon and its products.
K J Pogliano, J Beckwith
J Bacteriol. 1994 Feb; 176(3): 804–814. doi: 10.1128/jb.176.3.804-814.1994
PMCID:
PMC205118
SummaryPage BrowsePDF–2.3M
18.
Identification of Genes Encoding tRNA Modification Enzymes by Comparative Genomics
Valérie de Crécy-Lagard
Methods Enzymol. Author manuscript; available in PMC 2011 Feb 7.
Published in final edited form as: Methods Enzymol. 2007; 425: 153–183. doi: 10.1016/S0076-6879(07)25007-4
PMCID:
PMC3034448
ArticlePDF–209K
19.
Alignment of genes from the 9-minute region (araJ to tsx) of the Escherichia coli K-12 linkage map to the physical map.
J M Lucht, W Boos, E Bremer
J Bacteriol. 1992 Mar; 174(5): 1709–1710. doi: 10.1128/jb.174.5.1709-1710.1992
PMCID:
PMC206576
SummaryPage BrowsePDF–315K
20.
Improvement of reading frame maintenance is a common function for several tRNA modifications
Jaunius Urbonavičius, Qiang Qian, Jérôme M.B. Durand, Tord G. Hagervall, Glenn R. Björk
EMBO J. 2001 Sep 3; 20(17): 4863–4873. doi: 10.1093/emboj/20.17.4863
PMCID:
PMC125605
ArticlePDF–373K

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