micrograph - PMC

Published in final edited form as: Comput Methods Programs Biomed. 2022 Jun; 220: 106799. Published online 2022 Apr 3. doi: 10.1016/j.cmpb.2022.106799

PMCID:: PMC9149132

Article PDF–1.7M

Select item 99301856.

Reducing bias and variance for CTF estimation in single particle cryo-EM

Ayelet Heimowitz, Joakim Andén, Amit Singer

Ultramicroscopy. Author manuscript; available in PMC 2023 Feb 15.

Published in final edited form as: Ultramicroscopy. 2020 May; 212: 112950. Published online 2020 Jan 29. doi: 10.1016/j.ultramic.2020.112950

PMCID:: PMC9930185

Article PDF–4.1M

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A Scanning Electron Micrograph-based Resource for Identification of Loci Involved in Epidermal Development in Tomato: Elucidation of a New Function for the Mixta-like Transcription Factor in Leaves

Javier Galdon-Armero, Lisette Arce-Rodriguez, Matthew Downie, Jie Li, Cathie Martin

Plant Cell. 2020 May; 32(5): 1414–1433. Published online 2020 Mar 13. doi: 10.1105/tpc.20.00127

PMCID:: PMC7203947

Article PDF–3.4M

Select item 80082468.

Experimental evaluation of super-resolution imaging and magnification choice in single-particle cryo-EM

J. Ryan Feathers, Katherine A. Spoth, J. Christopher Fromme

J Struct Biol X. 2021; 5: 100047. Published online 2021 Mar 13. doi: 10.1016/j.yjsbx.2021.100047

PMCID:: PMC8008246

Article PDF–12M

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DeepCryoPicker: fully automated deep neural network for single protein particle picking in cryo-EM

Adil Al-Azzawi, Anes Ouadou, Highsmith Max, Ye Duan, John J. Tanner, Jianlin Cheng

BMC Bioinformatics. 2020; 21: 509. Published online 2020 Nov 9. doi: 10.1186/s12859-020-03809-7

PMCID:: PMC7653784

Article PDF–9.9M

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Comparing ensemble methods combined with different aggregating models using micrograph cell segmentation as an initial application example

St. Göb, S. Sawant, F.X. Erick, C. Schmidkonz, A. Ramming, E.W. Lang, T. Wittenberg, Th.I. Götz

J Pathol Inform. 2023; 14: 100304. Published online 2023 Mar 5. doi: 10.1016/j.jpi.2023.100304

PMCID:: PMC10034515

Article PDF–2.1M

Select item 952337911.

Method for analyzing HR-TEM micrographs to propose and/or describe structures and their interaction in crystalline materials

R. Obeso–Estrella, B. Pawelec, N. Mota, L.A. Flores–Sanchez, J.M. Quintana–Melgoza, R.I. Yocupicio–Gaxiola, T.A. Zepeda

MethodsX. 2022; 9: 101855. Published online 2022 Sep 21. doi: 10.1016/j.mex.2022.101855

PMCID:: PMC9523379

Article PDF–2.1M

Select item 784259312.

Protocols for Processing and Interpreting cryoEM Data Using Bsoft: A Case Study of the Retinal Adhesion Protein, Retinoschisin

J. Bernard Heymann

Bio Protoc. 2020 Jan 20; 10(2): e3491. Published online 2020 Jan 20. doi: 10.21769/BioProtoc.3491

PMCID:: PMC7842593

Article PDF–1.5M

Select item 733846013.

Y₂O₃–Al₂O₃ microsphere crystallization analyzed by electron backscatter diffraction (EBSD)

Wolfgang Wisniewski, Peter Švančárek, Anna Prnová, Milan Parchovianský, Dušan Galusek

Sci Rep. 2020; 10: 11122. Published online 2020 Jul 6. doi: 10.1038/s41598-020-67816-7

PMCID:: PMC7338460

Article PDF–6.5M

Select item 975411314.

Macrophages and vimentin in tissues adjacent to megaprostheses and mesh in reconstructive surgeries

Kunihiro Asanuma, Tomoki Nakamura, Takahiro Iino, Tomohito Hagi, Akihiro Sudo

Commun Integr Biol. 2022; 15(1): 168–181. Published online 2022 Aug 5. doi: 10.1080/19420889.2022.2101193

PMCID:: PMC9754113

Article PDF–5.3M

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A COMPARISON OF SIMULTANEOUS POLYGRAPH AND MICROGRAPH TRACINGS

Frank S. Meara, T. Homer Coffen, Albert C. Crehore

J Exp Med. 1912 Sep 1; 16(3): 280–290. doi: 10.1084/jem.16.3.280

PMCID:: PMC2124972

Summary PDF–414K

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PIXER: an automated particle-selection method based on segmentation using a deep neural network

Jingrong Zhang, Zihao Wang, Yu Chen, Renmin Han, Zhiyong Liu, Fei Sun, Fa Zhang

BMC Bioinformatics. 2019; 20: 41. Published online 2019 Jan 18. doi: 10.1186/s12859-019-2614-y

PMCID:: PMC6339297

Article PDF–3.3M

Select item 12392717.

Crescent Bodies of Parachlamydia acanthamoeba and Its Life Cycle within Acanthamoeba polyphaga: an Electron Micrograph Study

Gilbert Greub, Didier Raoult

Appl Environ Microbiol. 2002 Jun; 68(6): 3076–3084. doi: 10.1128/AEM.68.6.3076-3084.2002

PMCID:: PMC123927

Article PDF–2.8M

Select item 685886818.

Real-time cryo–EM data pre-processing with Warp

Dimitry Tegunov, Patrick Cramer

Nat Methods. Author manuscript; available in PMC 2020 Apr 7.

Published in final edited form as: Nat Methods. 2019 Nov; 16(11): 1146–1152. Published online 2019 Oct 7. doi: 10.1038/s41592-019-0580-y

PMCID:: PMC6858868

Article PDF–1.8M

Select item 441631219.

Seeing tobacco mosaic virus through direct electron detectors

Simon A. Fromm, Tanmay A.M. Bharat, Arjen J. Jakobi, Wim J.H. Hagen, Carsten Sachse

J Struct Biol. 2015 Feb; 189(2): 87–97. doi: 10.1016/j.jsb.2014.12.002

PMCID:: PMC4416312

Article

Select item 858925320.

Extending Cryo-EM to Nonaqueous Liquid Systems

Asia Matatyaho Ya’akobi, Yeshayahu Talmon

Acc Chem Res. 2021 May 4; 54(9): 2100–2109. Published online 2021 Apr 19. doi: 10.1021/acs.accounts.1c00077

PMCID:: PMC8589253

Article PDF–5.1M

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