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Select item 102625321.

SBMLKinetics: a tool for annotation-independent classification of reaction kinetics for SBML models

Jin Xu

BMC Bioinformatics. 2023; 24: 248. Published online 2023 Jun 13. doi: 10.1186/s12859-023-05380-3

PMCID:: PMC10262532

Abstract Article PDF–1.4M

Select item 82335022.

Rubisco Adaptation Is More Limited by Phylogenetic Constraint Than by Catalytic Trade-off

Jacques W Bouvier, David M Emms, Timothy Rhodes, Jai S Bolton, Amelia Brasnett, Alice Eddershaw, Jochem R Nielsen, Anastasia Unitt, Spencer M Whitney, Steven Kelly

Mol Biol Evol. 2021 Jul; 38(7): 2880–2896. Published online 2021 Mar 19. doi: 10.1093/molbev/msab079

PMCID:: PMC8233502

Abstract Article PDF–1.3M

Select item 54150193.

Mechanisms of kinetic stabilization by the drugs paclitaxel and vinblastine

Brian T. Castle, Seth McCubbin, Louis S. Prahl, Jordan N. Bernens, David Sept, David J. Odde

Mol Biol Cell. 2017 May 1; 28(9): 1238–1257. doi: 10.1091/mbc.E16-08-0567

PMCID:: PMC5415019

Abstract Article PDF–8.6M

Select item 86371594.

The Kinetics Studies on Hydrolysis of Hemicellulose

Qi Yuan, Shan Liu, Ming-Guo Ma, Xing-Xiang Ji, Sun-Eun Choi, Chuanling Si

Front Chem. 2021; 9: 781291. Published online 2021 Nov 18. doi: 10.3389/fchem.2021.781291

PMCID:: PMC8637159

Abstract Article PDF–699K

Select item 81909255.

Langmuir Adsorption Kinetics in Liquid Media: Interface Reaction Model

Md Akhtarul Islam, Myisha Ahmed Chowdhury, Md. Salatul Islam Mozumder, Md. Tamez Uddin

ACS Omega. 2021 Jun 8; 6(22): 14481–14492. Published online 2021 May 26. doi: 10.1021/acsomega.1c01449

PMCID:: PMC8190925

Abstract Article PDF–1004K

Select item 76643846.

Thermodynamics and Kinetics of Glycolytic Reactions. Part I: Kinetic Modeling Based on Irreversible Thermodynamics and Validation by Calorimetry

Kristina Vogel, Thorsten Greinert, Monique Reichard, Christoph Held, Hauke Harms, Thomas Maskow

Int J Mol Sci. 2020 Nov; 21(21): 8341. Published online 2020 Nov 6. doi: 10.3390/ijms21218341

PMCID:: PMC7664384

Abstract Article PDF–2.5M

Select item 80791487.

Transient kinetic studies of the antiviral Drosophila Dicer-2 reveal roles of ATP in self–nonself discrimination

Raushan K Singh, McKenzie Jonely, Evan Leslie, Nick A Rejali, Rodrigo Noriega, Brenda L Bass

eLife. 2021; 10: e65810. Published online 2021 Mar 31. doi: 10.7554/eLife.65810

PMCID:: PMC8079148

Abstract Article PDF–1.5M

Select item 66314918.

Continuous Monitoring of Shelf Lives of Materials by Application of Data Loggers with Implemented Kinetic Parameters

Bertrand Roduit, Charles Albert Luyet, Marco Hartmann, Patrick Folly, Alexandre Sarbach, Alain Dejeaifve, Rowan Dobson, Nicolas Schroeter, Olivier Vorlet, Michal Dabros, Richard Baltensperger

Molecules. 2019 Jun; 24(12): 2217. Published online 2019 Jun 13. doi: 10.3390/molecules24122217

PMCID:: PMC6631491

Abstract Article PDF–6.7M

Select item 105848309.

Generation of DNA oligomers with similar chemical kinetics via in-silico optimization

Michael Tobiason, Bernard Yurke, William L. Hughes

Commun Chem. 2023; 6: 226. Published online 2023 Oct 18. doi: 10.1038/s42004-023-01026-w

PMCID:: PMC10584830

Abstract Article PDF–2.3M

Select item 866057310.

Comparison of V̇O₂-Kinetic Parameters for the Management of Heart Failure

Jonathan Wagner, Max Niemeyer, Denis Infanger, Otmar Pfister, Jonathan Myers, Arno Schmidt-Trucksäss, Raphael Knaier

Front Physiol. 2021; 12: 775601. Published online 2021 Nov 25. doi: 10.3389/fphys.2021.775601

PMCID:: PMC8660573

Abstract Article PDF–6.2M

Select item 994532911.

Engineering the kinetic stability of a β-trefoil protein by tuning its topological complexity

Delaney M. Anderson, Lakshmi P. Jayanthi, Shachi Gosavi, Elizabeth M. Meiering

Front Mol Biosci. 2023; 10: 1021733. Published online 2023 Feb 8. doi: 10.3389/fmolb.2023.1021733

PMCID:: PMC9945329

Abstract Article PDF–2.8M

Select item 897819912.

Principles of Tracer Kinetic Analysis in Oncology, Part I: Principles and Overview of Methodology

Austin R. Pantel, Varsha Viswanath, Mark Muzi, Robert K. Doot, David A. Mankoff

J Nucl Med. 2022 Mar; 63(3): 342–352. doi: 10.2967/jnumed.121.263518

PMCID:: PMC8978199

Abstract Article PDF–1.0M

Select item 671040213.

A Kinetic Map of the Homomeric Voltage-Gated Potassium Channel (Kv) Family

Rajnish Ranjan, Emmanuelle Logette, Michela Marani, Mirjia Herzog, Valérie Tâche, Enrico Scantamburlo, Valérie Buchillier, Henry Markram

Front Cell Neurosci. 2019; 13: 358. Published online 2019 Aug 20. doi: 10.3389/fncel.2019.00358

PMCID:: PMC6710402

Abstract Article PDF–4.3M

Select item 942378014.

Novel method for kinetic analysis applied to transport by the uniporter OCT2

Stephen H. Wright, Timothy W. Secomb

Am J Physiol Renal Physiol. 2022 Sep 1; 323(3): F370–F387. Published online 2022 Jul 21. doi: 10.1152/ajprenal.00106.2022

PMCID:: PMC9423780

Abstract Article

Select item 901368615.

Inter-individual variation in chlorpyrifos toxicokinetics characterized by physiologically based kinetic (PBK) and Monte Carlo simulation comparing human liver microsome and Supersome^™ cytochromes P450 (CYP)-specific kinetic data as model input

Shensheng Zhao, Sebastiaan Wesseling, Ivonne. M. C. M. Rietjens, Marije Strikwold

Arch Toxicol. 2022; 96(5): 1387–1409. Published online 2022 Mar 16. doi: 10.1007/s00204-022-03251-z

PMCID:: PMC9013686

Abstract Article PDF–4.0M

Select item 452635816.

Evidence for a Shared Mechanism in the Formation of Urea-Induced Kinetic and Equilibrium Intermediates of Horse Apomyoglobin from Ultrarapid Mixing Experiments

Takuya Mizukami, Yukiko Abe, Kosuke Maki

PLoS One. 2015; 10(8): e0134238. Published online 2015 Aug 5. doi: 10.1371/journal.pone.0134238

PMCID:: PMC4526358

Abstract Article PDF–1.8M

Select item 675919517.

From Escherichia coli mutant ¹³C labeling data to a core kinetic model: A kinetic model parameterization pipeline

Charles J. Foster, Saratram Gopalakrishnan, Maciek R. Antoniewicz, Costas D. Maranas

PLoS Comput Biol. 2019 Sep; 15(9): e1007319. Published online 2019 Sep 10. doi: 10.1371/journal.pcbi.1007319

PMCID:: PMC6759195

Abstract Article PDF–3.4M

Select item 754906918.

Diverse Cell Stimulation Kinetics Identify Predictive Signal Transduction Models

Hossein Jashnsaz, Zachary R. Fox, Jason J. Hughes, Guoliang Li, Brian Munsky, Gregor Neuert

iScience. 2020 Oct 23; 23(10): 101565. Published online 2020 Sep 15. doi: 10.1016/j.isci.2020.101565

PMCID:: PMC7549069

Abstract Article PDF–17M

Select item 460750419.

Integrating Kinetic Model of E. coli with Genome Scale Metabolic Fluxes Overcomes Its Open System Problem and Reveals Bistability in Central Metabolism

Ahmad A. Mannan, Yoshihiro Toya, Kazuyuki Shimizu, Johnjoe McFadden, Andrzej M. Kierzek, Andrea Rocco

PLoS One. 2015; 10(10): e0139507. Published online 2015 Oct 15. doi: 10.1371/journal.pone.0139507

PMCID:: PMC4607504

Abstract Article PDF–4.2M

Select item 683876020.

Kinetic Mechanism of RNA Helix-Terminal Basepairing—A Kinetic Minima Network Analysis

Fengfei Wang, Li-Zhen Sun, Pinggen Cai, Shi-Jie Chen, Xiaojun Xu

Biophys J. 2019 Nov 5; 117(9): 1674–1683. Published online 2019 Sep 20. doi: 10.1016/j.bpj.2019.09.017

PMCID:: PMC6838760

Abstract Article PDF–1.7M

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