|
| Status |
Public on Jan 05, 2011 |
| Title |
NA19206 replicate-1 |
| Sample type |
genomic |
| |
|
| Source name |
HapMap Yoruba lymphoblastoid cell line
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
cell line: HapMap Yoruba lymphoblastoid cell line
coriell catalog id: NA19206
replicate: 1
|
| Biomaterial provider |
NIGMS Human Genetic Cell Repository (Coriell Institute for Medical Research, New Jersey, USA)
http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA19206
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from LCLs according to standard recommended Illumina protocol for genome DNA extraction using the EZ DNA Methylation-Gold Kit (from Zymo Research).
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
| Scan protocol |
BeadArray
|
| Description |
4831231052_D
|
| Data processing |
BeadStudio software
|
| |
|
| Submission date |
Dec 17, 2010 |
| Last update date |
Apr 26, 2012 |
| Contact name |
Jordana Bell |
| E-mail(s) |
jordana.bell@kcl.ac.uk
|
| Organization name |
King's College London
|
| Department |
Department of Twin Research and Genetic Epidemiology
|
| Street address |
St Thomas' Hospital, Westminster Bridge Rd
|
| City |
London |
| ZIP/Postal code |
SE1 7EH |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL8490 |
| Series (1) |
| GSE26133 |
DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines |
|
