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GEO accession:
Sample GSM325318
Query DataSets for GSM325318
Status
Public on Apr 16, 2009
Title
Skin
Sample type
RNA
Source name
Skin tissue of frog
Organism
Xenopus tropicalis
Characteristics
Skin
Extracted molecule
polyA RNA
Extraction protocol
mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label
Cy5 or Cy3
Label protocol
cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
Hybridization protocol
Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol
Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description
Skin tissue of frog
Data processing
Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
Submission date
Sep 29, 2008
Last update date
Apr 16, 2009
Contact name
Esther T Chan
Organization name
Celgene Corporation
Street address
1500 Owens Street, Suite 500
City
San Francisco
State/province
California
ZIP/Postal code
94158
Country
USA
Platform ID
GPL7400
Series (1)
GSE12975
Expression of known and predicted genes in tissues of Xenopus tropicalis (frog)
Data table header descriptions
ID_REF
Unique identifier
VALUE
Arcsinh-transformed normalized intensity.
Data table
ID_REF
VALUE
EnsFrogProbe_1
5.1340085
EnsFrogProbe_2
5.0091525
EnsFrogProbe_3
5.356492
EnsFrogProbe_4
5.106786
EnsFrogProbe_5
4.9521725
EnsFrogProbe_6
5.506872
EnsFrogProbe_7
5.138901
EnsFrogProbe_8
3.9539065
EnsFrogProbe_9
4.091578
EnsFrogProbe_10
4.0115085
EnsFrogProbe_11
3.9652925
EnsFrogProbe_12
4.031182
EnsFrogProbe_13
4.625557
EnsFrogProbe_14
4.344269
EnsFrogProbe_15
4.0595685
EnsFrogProbe_16
4.3046375
EnsFrogProbe_17
4.54622
EnsFrogProbe_18
6.999365
EnsFrogProbe_19
6.2155895
EnsFrogProbe_20
6.4462045
Total number of rows:
41523
Table truncated, full table size
1134 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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