|
| Status |
Public on Jan 13, 2020 |
| Title |
Calibrated Scc1, Sgo1 and Brn1 ChIP-seq in metaphase with and without tension, in strains where convergent genes at pericentromere borderes are rearranged into a tandem orientation |
| Organisms |
Schizosaccharomyces pombe; Saccharomyces cerevisiae |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Genome binding/occupancy profiling of Sgo1 and the condensin subunit Brn1 by high throughput sequencing. S. pombe is included as the calibration genome.
|
| |
|
| Overall design |
Purpose: Does the localisation of Cohesin, Shugoshin and Condensin change upon the rearrangement of convergent genes into tandem at pericentromere borders?
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| |
|
| Contributor(s) |
Paldi F, Marston AL |
| Citation(s) |
32494069 |
| Submission date |
Mar 13, 2019 |
| Last update date |
Jun 04, 2020 |
| Contact name |
Daniel Robertson |
| E-mail(s) |
daniel.robertson@ed.ac.uk
|
| Organization name |
University of Edinburgh
|
| Department |
Discovery Research Platform for Hidden Cell Biology
|
| Lab |
Bioinformatics Core
|
| Street address |
2.28 Michael Swann Building, Kings Buildings, Mayfield Road
|
| City |
Edinburgh |
| State/province |
Midlothian |
| ZIP/Postal code |
EH9 3JR |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL26296 |
Illumina MiniSeq (Saccharomyces cerevisiae; Schizosaccharomyces pombe) |
|
| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE104135 |
Convergent genes shape budding yeast pericentromeres |
|
| Relations |
| BioProject |
PRJNA526837 |
| SRA |
SRP188316 |
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