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    LOC657937 cdc42 homolog [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657937, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC657937
    Gene description
    cdc42 homolog
    Primary source
    BEETLEBASE:TC013187
    Locus tag
    TcasGA2_TC013187
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (3194986..3197121)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (12612106..12614244, complement)

    Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene Tyrosine aminotransferase Neighboring gene minidiscs Neighboring gene protein FAM76A Neighboring gene uncharacterized LOC100142155

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Cdc42 protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cdc42 homolog; similar to Cdc42 protein homolog
    Names
    GLEAN_13187

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

      Range
      3194986..3197121
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_961595.4 → XP_966688.1  cdc42 homolog

      See identical proteins and their annotated locations for XP_966688.1

      UniProtKB/TrEMBL
      D6WN12
      Conserved Domains (1) summary
      cd01874
      Location:3 → 177
      Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family
    Nucleotide Protein Strain
    Heading Accession and Version

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