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    LOC103312764 tRNA (34-2'-O)-methyltransferase regulator WDR6 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 103312764, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC103312764
    Gene description
    tRNA (34-2'-O)-methyltransferase regulator WDR6
    Locus tag
    TcasGA2_TC008526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (12619628..12719680)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (12238273..12279607)

    Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene nose resistant to fluoxetine protein 6 Neighboring gene uncharacterized LOC107398693 Neighboring gene uncharacterized LOC103312762 Neighboring gene uncharacterized LOC135267129 Neighboring gene uncharacterized LOC135267110 Neighboring gene uncharacterized LOC103312466 Neighboring gene uncharacterized LOC107398864

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (34-2'-O)-methyltransferase regulator WDR6
    Names
    AUGUSTUS-3.0.2_32960
    GLEAN_08526
    WD repeat-containing protein 6
    WD repeat-containing protein 6-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

      Range
      12619628..12719680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008194229.3 → XP_008192451.1  tRNA (34-2'-O)-methyltransferase regulator WDR6 isoform X1

      Conserved Domains (3) summary
      COG2319
      Location:165 → 557
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:135 → 181
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:146 → 301
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_064358938.1 → XP_064215008.1  tRNA (34-2'-O)-methyltransferase regulator WDR6 isoform X2

    3. XM_008194231.3 → XP_008192453.1  tRNA (34-2'-O)-methyltransferase regulator WDR6 isoform X3

      Conserved Domains (3) summary
      COG2319
      Location:163 → 295
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:135 → 181
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:146 → 301
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RNA

    1. XR_010335436.1 RNA Sequence

    2. XR_010335433.1 RNA Sequence

    3. XR_010335434.1 RNA Sequence

    4. XR_010335435.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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