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    NTPase NTPase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 658576, updated on 10-May-2024

    Summary

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    Gene symbol
    NTPase
    Gene description
    NTPase
    Locus tag
    TcasGA2_TC008016
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Genomic context

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    See NTPase in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (4017534..4019832)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (3899885..3902198)

    Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specificity factor subunit 6 Neighboring gene Proteasome alpha7 subunit Neighboring gene UFM1 specific peptidase 2 Neighboring gene leucine-rich repeat-containing protein 56 Neighboring gene synaptotagmin 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ectonucleoside triphosphate diphosphohydrolase 5
    Names
    AUGUSTUS-3.0.2_08016
    Ectonucleoside triphosphate diphosphohydrolase 5-like Protein
    GLEAN_08016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

      Range
      4017534..4019832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008193810.3 → XP_008192032.1  ectonucleoside triphosphate diphosphohydrolase 5 isoform X1

      See identical proteins and their annotated locations for XP_008192032.1

      UniProtKB/TrEMBL
      D1ZZB7
      Conserved Domains (1) summary
      cl17037
      Location:80 → 465
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    2. XM_008193811.3 → XP_008192033.1  ectonucleoside triphosphate diphosphohydrolase 5 isoform X2

      Conserved Domains (1) summary
      cl17037
      Location:77 → 462
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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