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    LOC103313951 uncharacterized LOC103313951 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 103313951, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC103313951
    Gene description
    uncharacterized LOC103313951
    Locus tag
    TcasGA2_TC006381
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC103313951 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 6 NC_087399.1 (6205245..6216082, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG8 NC_007423.3 (8204963..8206829)

    Chromosome 6 - NC_087399.1Genomic Context describing neighboring genes Neighboring gene Structural maintenance of chromosomes 2 Neighboring gene Sepiapterin reductase Neighboring gene Pseudouridine synthase 7 Neighboring gene Heparan sulfate 3-O sulfotransferase-B Neighboring gene mitochondrial intermediate peptidase Neighboring gene deltex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione disulfide oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA-type intron splice site recognition and cleavage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tRNA-intron endonuclease complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA-splicing endonuclease subunit Sen54; uncharacterized protein LOC103313951
    Names
    AUGUSTUS-3.0.2_06381
    AUGUSTUS-3.0.2_06382
    GLEAN_06381

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087399.1 Reference icTriCast1.1 Primary Assembly

      Range
      6205245..6216082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008198574.3 → XP_008196796.1  uncharacterized protein LOC103313951 isoform X3

      Conserved Domains (1) summary
      cd03419
      Location:29 → 108
      GRX_GRXh_1_2_like; Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, ...

    2. XM_015982728.2 → XP_015838214.1  uncharacterized protein LOC103313951 isoform X2

      Conserved Domains (1) summary
      cd03419
      Location:54 → 133
      GRX_GRXh_1_2_like; Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, ...

    3. XM_064357603.1 → XP_064213673.1  tRNA-splicing endonuclease subunit Sen54 isoform X1

    4. XM_064357602.1 → XP_064213672.1  tRNA-splicing endonuclease subunit Sen54 isoform X1

    RNA

    1. XR_010334685.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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