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    L zinc finger protein Lobe [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 655026, updated on 6-Jul-2024

    Summary

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    Gene symbol
    L
    Gene description
    zinc finger protein Lobe
    Locus tag
    TcasGA2_TC004682
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 10 NC_087403.1 (231349..262993, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LGX NC_007416.3 (188506..220336)

    Chromosome 10 - NC_087403.1Genomic Context describing neighboring genes Neighboring gene Organic anion transporting polypeptide 74D Neighboring gene uncharacterized LOC654960 Neighboring gene Secretory 5 Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene N(alpha)-acetyltransferase 35 Neighboring gene NF-kappa-B-repressing factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin insulator sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 423 homolog
    Names
    AUGUSTUS-3.0.2_04682
    GLEAN_04682
    Lobe
    Zinc finger protein 423-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087403.1 Reference icTriCast1.1 Primary Assembly

      Range
      231349..262993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015977589.2 → XP_015833075.1  zinc finger protein 423 homolog isoform X1

      UniProtKB/TrEMBL
      A0A139WPR6, D6W676
      Conserved Domains (1) summary
      sd00017
      Location:113 → 133
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015977635.2 → XP_015833121.1  zinc finger protein 423 homolog isoform X3

      UniProtKB/TrEMBL
      A0A139WPR2, A0A139WPR6
      Conserved Domains (1) summary
      sd00017
      Location:96 → 116
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_015977610.2 → XP_015833096.1  zinc finger protein 423 homolog isoform X2

      UniProtKB/TrEMBL
      A0A139WPR6
      Conserved Domains (1) summary
      sd00017
      Location:101 → 121
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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