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    csul capsuleen [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657559, updated on 10-May-2024

    Summary

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    Gene symbol
    csul
    Gene description
    capsuleen
    Locus tag
    TcasGA2_TC003689
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (22615796..22622918, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (12757722..12764816)

    Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA phosphodiesterase Neighboring gene Ced-12 Neighboring gene NADH dehydrogenase (ubiquinone) 24 kDa subunit Neighboring gene uncharacterized LOC107397556 Neighboring gene uncharacterized LOC107397557

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone arginine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-arginine N-methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein arginine N-methyltransferase 5
    Names
    AUGUSTUS-3.0.2_03689
    GLEAN_03689
    Protein arginine N-methyltransferase 5-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

      Range
      22615796..22622918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008192892.3 → XP_008191114.2  protein arginine N-methyltransferase 5

      UniProtKB/TrEMBL
      D6WDN0
      Conserved Domains (2) summary
      pfam05185
      Location:174 → 605
      PRMT5; PRMT5 arginine-N-methyltransferase
      pfam16950
      Location:175 → 451
      SAMBD; SAM-binding_domain
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases