Usp5 Ubiquitin specific protease 5 [Tribolium castaneum (red flour beetle)] - Gene

Summary

Gene symbol: Usp5
Gene description: Ubiquitin specific protease 5
Locus tag: TcasGA2_TC003401
Gene type: protein coding
RefSeq status: MODEL
Organism: Tribolium castaneum
Lineage: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs: fruit fly all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_04	current	icTriCast1.1 (GCF_031307605.1)	1	NC_087394.1 (32227141..32230999, complement)
103	previous assembly	Tcas5.2 (GCF_000002335.3)	Linkage Group LG3	NC_007418.3 (4303134..4306981)

Chromosome 1 - NC_087394.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables cysteine-type deubiquitinase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein deubiquitination	IEA Inferred from Electronic Annotation more info	PubMed

Names: AUGUSTUS-3.0.2_03401; GLEAN_03401; Ubiquitin carboxyl-terminal hydrolase 5-like Protein

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The following sections contain reference sequences that belong to a specific genome build. Explain

XM_064359698.1 → XP_064215768.1 ubiquitin carboxyl-terminal hydrolase 5 isoform X2
XM_962063.4 → XP_967156.1 ubiquitin carboxyl-terminal hydrolase 5 isoform X1

See identical proteins and their annotated locations for XP_967156.1

UniProtKB/TrEMBL

D6WG65

Conserved Domains (5) summary

COG5207
Location:6 → 794

UBP14; Uncharacterized Zn-finger protein, UBP-type [General function prediction only]

cd02658
Location:321 → 792

Peptidase_C19B; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

cd14294
Location:618 → 661

UBA1_UBP5_like; UBA1 domain found in ubiquitin carboxyl-terminal hydrolase UBP5, UBP13 and similar proteins

cd14386
Location:678 → 720

UBA2_UBP5; UBA2 domain found in ubiquitin carboxyl-terminal hydrolase 5 (UBP5)

pfam02148
Location:192 → 266

zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein