U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100121141 CCR4-NOT transcription complex subunit 2 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100121141, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100121141
    Gene description
    CCR4-NOT transcription complex subunit 2
    See related
    NASONIABASE:NV13543
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (206628..211013)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279650.1 (206645..211013)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 37 Neighboring gene pentatricopeptide repeat-containing protein 2, mitochondrial Neighboring gene uncharacterized LOC100679070 Neighboring gene uncharacterized LOC100679530 Neighboring gene uncharacterized LOC100678390 Neighboring gene ubiquitin carboxyl-terminal hydrolase 36

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of stem cell population maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    CCR4-NOT transcription complex subunit 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      206628..211013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016986805.3 → XP_016842294.1  CCR4-NOT transcription complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A7M7G5C9
      Conserved Domains (1) summary
      pfam04153
      Location:348 → 470
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    2. XM_001604677.6 → XP_001604727.2  CCR4-NOT transcription complex subunit 2 isoform X1

      See identical proteins and their annotated locations for XP_001604727.2

      UniProtKB/TrEMBL
      A0A7M7G5C9
      Conserved Domains (1) summary
      pfam04153
      Location:348 → 470
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    3. XM_008219894.3 → XP_008218116.1  CCR4-NOT transcription complex subunit 2 isoform X1

      See identical proteins and their annotated locations for XP_008218116.1

      UniProtKB/TrEMBL
      A0A7M7G5C9
      Conserved Domains (1) summary
      pfam04153
      Location:348 → 470
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    4. XM_008219897.3 → XP_008218119.1  CCR4-NOT transcription complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A7M7HBN1
      Conserved Domains (1) summary
      pfam04153
      Location:321 → 443
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    5. XM_008219893.3 → XP_008218115.1  CCR4-NOT transcription complex subunit 2 isoform X1

      See identical proteins and their annotated locations for XP_008218115.1

      UniProtKB/TrEMBL
      A0A7M7G5C9
      Conserved Domains (1) summary
      pfam04153
      Location:348 → 470
      NOT2_3_5; NOT2 / NOT3 / NOT5 family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases