U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100123149 protein alan shepard [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100123149, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100123149
    Gene description
    protein alan shepard
    See related
    NASONIABASE:NV11254
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 2 Unlocalized Scaffold NC_045758.1 (6885785..6940871, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 2 Unlocalized Scaffold NW_022279606.1 (6885770..6940871, complement)

    Chromosome 2 - NC_045758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100123130 Neighboring gene FACT complex subunit spt16 Neighboring gene solute carrier family 23 member 2 Neighboring gene tRNA N(3)-methylcytidine methyltransferase METTL2 Neighboring gene sphingomyelin phosphodiesterase 4 Neighboring gene adenosine receptor A2b Neighboring gene protein-tyrosine sulfotransferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A) binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(U) RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein alan shepard

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045758.1 Reference Nvit_psr_1.1

      Range
      6885785..6940871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031922993.2 → XP_031778853.1  protein alan shepard isoform X10

      UniProtKB/TrEMBL
      A0A7M7PZ13
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    2. XM_032597042.1 → XP_032452933.1  protein alan shepard isoform X24

      UniProtKB/TrEMBL
      A0A7M7TC90
      Conserved Domains (2) summary
      cd12243
      Location:240 → 308
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:335 → 413
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    3. XM_032597048.1 → XP_032452939.1  protein alan shepard isoform X36

      UniProtKB/TrEMBL
      A0A7M7QPV1

    4. XM_031923003.2 → XP_031778863.1  protein alan shepard isoform X30

      UniProtKB/TrEMBL
      A0A7M7Q328
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    5. XM_032597043.1 → XP_032452934.1  protein alan shepard isoform X28

      UniProtKB/TrEMBL
      A0A7M7QQC0
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    6. XM_032597038.1 → XP_032452929.1  protein alan shepard isoform X20

      UniProtKB/TrEMBL
      A0A7M7QPP2
      Conserved Domains (3) summary
      TIGR01661
      Location:148 → 301
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:337 → 415
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    7. XM_031922997.2 → XP_031778857.1  protein alan shepard isoform X18

      UniProtKB/TrEMBL
      A0A7M7Q1N0
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    8. XM_032597034.1 → XP_032452925.1  protein alan shepard isoform X15

      UniProtKB/TrEMBL
      A0A7M7QQ55
      Conserved Domains (3) summary
      TIGR01661
      Location:148 → 301
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    9. XM_031922985.2 → XP_031778845.1  protein alan shepard isoform X1

      UniProtKB/TrEMBL
      A0A7M7Q1M2
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    10. XM_031922989.2 → XP_031778849.1  protein alan shepard isoform X5

      UniProtKB/TrEMBL
      A0A7M7Q0B8
      Conserved Domains (2) summary
      cd12243
      Location:240 → 308
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:337 → 415
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    11. XM_031923000.2 → XP_031778860.1  protein alan shepard isoform X27

      UniProtKB/TrEMBL
      A0A7M7PY91
      Conserved Domains (2) summary
      cd12243
      Location:240 → 308
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    12. XM_031922986.2 → XP_031778846.1  protein alan shepard isoform X2

      UniProtKB/TrEMBL
      A0A7M7PY76
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    13. XM_031922987.2 → XP_031778847.1  protein alan shepard isoform X3

      UniProtKB/TrEMBL
      A0A7M7Q080
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:337 → 415
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    14. XM_031922990.2 → XP_031778850.1  protein alan shepard isoform X6

      UniProtKB/TrEMBL
      A0A7M7Q2H1
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    15. XM_031922998.2 → XP_031778858.1  protein alan shepard isoform X25

      UniProtKB/TrEMBL
      A0A7M7PY90
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:321 → 399
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    16. XM_031923002.2 → XP_031778862.1  protein alan shepard isoform X29

      UniProtKB/TrEMBL
      A0A7M7Q2I3
      Conserved Domains (2) summary
      cd12244
      Location:317 → 395
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 316
      RRM_SF; RNA recognition motif (RRM) superfamily

    17. XM_032597041.1 → XP_032452932.1  protein alan shepard isoform X23

      UniProtKB/TrEMBL
      A0A7M7QUE4
      Conserved Domains (2) summary
      cd12243
      Location:240 → 308
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:328 → 406
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    18. XM_031922996.2 → XP_031778856.1  protein alan shepard isoform X13

      UniProtKB/TrEMBL
      A0A7M7PYZ4
      Conserved Domains (2) summary
      cd12243
      Location:240 → 308
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:328 → 406
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    19. XM_032597046.1 → XP_032452937.1  protein alan shepard isoform X33

      UniProtKB/TrEMBL
      A0A7M7QQ64
      Conserved Domains (2) summary
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 318
      RRM_SF; RNA recognition motif (RRM) superfamily

    20. XM_031922999.2 → XP_031778859.1  protein alan shepard isoform X26

      UniProtKB/TrEMBL
      A0A7M7Q086
      Conserved Domains (2) summary
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 318
      RRM_SF; RNA recognition motif (RRM) superfamily

    21. XM_032597036.1 → XP_032452927.1  protein alan shepard isoform X17

      UniProtKB/TrEMBL
      A0A7M7QPU4

    22. XM_031922992.2 → XP_031778852.1  protein alan shepard isoform X9

      UniProtKB/TrEMBL
      A0A7M7T6Z7
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    23. XM_031922991.2 → XP_031778851.1  protein alan shepard isoform X7

      UniProtKB/TrEMBL
      A0A7M7Q310
      Conserved Domains (2) summary
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    24. XM_031922994.2 → XP_031778854.1  protein alan shepard isoform X11

      UniProtKB/TrEMBL
      A0A7M7T6Z0
      Conserved Domains (2) summary
      cd12243
      Location:230 → 300
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:329 → 407
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    25. XM_031922988.2 → XP_031778848.1  protein alan shepard isoform X4

      UniProtKB/TrEMBL
      A0A7M7PY80
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 574
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    26. XM_032597033.1 → XP_032452924.1  protein alan shepard isoform X14

      UniProtKB/TrEMBL
      A0A7M7QS67
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 573
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    27. XM_031922995.2 → XP_031778855.1  protein alan shepard isoform X12

      UniProtKB/TrEMBL
      A0A7M7Q0Y5
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 574
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    28. XM_031923004.2 → XP_031778864.1  protein alan shepard isoform X34

      UniProtKB/TrEMBL
      A0A7M7T6Z9
      Conserved Domains (2) summary
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 318
      RRM_SF; RNA recognition motif (RRM) superfamily

    29. XM_032597049.1 → XP_032452940.1  protein alan shepard isoform X37

      UniProtKB/TrEMBL
      A0A7M7QRG8
      Conserved Domains (2) summary
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 318
      RRM_SF; RNA recognition motif (RRM) superfamily

    30. XM_032597047.1 → XP_032452938.1  protein alan shepard isoform X35

      UniProtKB/TrEMBL
      A0A7M7QSA0
      Conserved Domains (2) summary
      cd12244
      Location:319 → 397
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
      cl17169
      Location:235 → 318
      RRM_SF; RNA recognition motif (RRM) superfamily

    31. XM_032597039.1 → XP_032452930.1  protein alan shepard isoform X21

      UniProtKB/TrEMBL
      A0A7M7QRW7
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 560
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    32. XM_032597045.1 → XP_032452936.1  protein alan shepard isoform X32

      UniProtKB/TrEMBL
      A0A7M7QS79
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 560
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    33. XM_032597044.1 → XP_032452935.1  protein alan shepard isoform X31

      UniProtKB/TrEMBL
      A0A7M7TC89
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 561
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:330 → 408
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    34. XM_032597035.1 → XP_032452926.1  protein alan shepard isoform X16

      UniProtKB/TrEMBL
      A0A7M7QS90
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 572
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:337 → 415
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    35. XM_032597031.1 → XP_032452922.1  protein alan shepard isoform X8

      UniProtKB/TrEMBL
      A0A7M7QQA8
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 569
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    36. XM_032597040.1 → XP_032452931.1  protein alan shepard isoform X22

      UniProtKB/TrEMBL
      A0A7M7QUF3
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 569
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family

    37. XM_032597037.1 → XP_032452928.1  protein alan shepard isoform X19

      UniProtKB/TrEMBL
      A0A7M7QRF9
      Conserved Domains (3) summary
      TIGR01628
      Location:240 → 570
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      cd12243
      Location:240 → 310
      RRM1_MSSP; RNA recognition motif 1 (RRM1) found in the c-myc gene single-strand binding proteins (MSSP) family
      cd12244
      Location:339 → 417
      RRM2_MSSP; RNA recognition motif 2 (RRM2) found in the c-myc gene single-strand binding proteins (MSSP) family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases