U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC413103 cysteine and histidine-rich protein 1 homolog [ Apis mellifera (honey bee) ]

    Gene ID: 413103, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC413103
    Gene description
    cysteine and histidine-rich protein 1 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB19485; GB43921
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: LG8
    Exon count:
    6
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG8 NC_037645.1 (6268589..6273975, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG8 NC_007077.3 (6318179..6323533, complement)

    Linkage Group LG8 - NC_037645.1Genomic Context describing neighboring genes Neighboring gene probable tubulin polyglutamylase TTLL1 Neighboring gene atrial natriuretic peptide receptor 1 Neighboring gene uncharacterized LOC409769 Neighboring gene uncharacterized LOC113218925 Neighboring gene uncharacterized LOC102656787 Neighboring gene microRNA mir-31a

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cysteine and histidine-rich protein 1 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037645.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      6268589..6273975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_396554.6 → XP_396554.4  cysteine and histidine-rich protein 1 homolog

      UniProtKB/TrEMBL
      A0A7M7R6F7, A0A8B9AZZ4
      Conserved Domains (2) summary
      pfam13920
      Location:161 → 214
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
      cl19105
      Location:218 → 289
      Sina; Seven in absentia (Sina) protein family, C-terminal substrate binding domain; composed of the Drosophila Sina protein, the mammalian Sina homolog (Siah), the plant protein SINAT5, and similar proteins. Sina, Siah and SINAT5 are RING-containing proteins ...
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases