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    nlpC NlpC/P60 family lipoprotein NlpC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946220, updated on 6-Oct-2023

    Summary

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    Gene symbol
    nlpC
    Gene description
    NlpC/P60 family lipoprotein NlpC
    Primary source
    ASAP:ABE-0005704
    Locus tag
    b1708
    See related
    ECOCYC:EG11133
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1706
    Summary
    First 15 aa are a type II signal peptide. spr, nlpC, yafL and ydhO are paralogs. [More information is available at EcoGene: EG11133]. The NlpC lipoprotein of Escherichia coli exhibits high sequence similarity to the p60 proteins of Listeria species and to CwlF of Bacillus subtilis . [More information is available at EcoCyc: EG11133].
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    Genomic context

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    Sequence:
    NC_000913.3 (1792267..1792731, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein adenylyltransferase SelO Neighboring gene anti-FlhDC factor RflP Neighboring gene vitamin B12 ABC transporter ATP binding subunit Neighboring gene thioredoxin/glutathione peroxidase BtuE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulation of a new cell wall hydrolase gene, cwlF, which affects cell separation in Bacillus subtilis. Ishikawa S, et al. J Bacteriol, 1998 May. PMID 9573210, Free PMC Article
    2. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
    3. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    NlpC/P60 family lipoprotein NlpC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1792267..1792731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416223.1 NlpC/P60 family lipoprotein NlpC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416223.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A444R0S0
      Conserved Domains (1) summary
      PRK10838
      Location:40 → 154
      spr; bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version

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