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    TOC75-I translocon outer membrane complex 75-I [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840488, updated on 15-Oct-2023

    Summary

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    Gene symbol
    TOC75-I
    Gene description
    translocon outer membrane complex 75-I
    Primary source
    Araport:AT1G35860
    Locus tag
    AT1G35860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10O5.4; F10O5_4; translocon outer membrane complex 75-I
    Summary
    TOC75 pseudogene due to a 5.4-kb gypsy/Ty3-related retrotransposon inserted at the 5' end of the gene
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (13332047..13334050, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pumilio 17 Neighboring gene pseudo Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toc159- and Toc75-independent import of a transit sequence-less precursor into the inner envelope of chloroplasts. Miras S, et al. J Biol Chem, 2007 Oct 5. PMID 17636260
    2. A molecular-genetic study of the Arabidopsis Toc75 gene family. Baldwin A, et al. Plant Physiol, 2005 Jun. PMID 15908591, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    translocon outer membrane complex 75-I
    NP_174821.1
    • translocon outer membrane complex 75-I (TOC75-I); LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 75-III (TAIR:AT3G46740.1); Has 497 Blast hits to 421 proteins in 90 species: Archae - 0; Bacteria - 217; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      13332047..13334050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103285.1 → NP_174821.1  translocon outer membrane complex 75-I [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174821.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVG0, Q9C8B7
      Conserved Domains (2) summary
      PLN03138
      Location:3 → 399
      PLN03138; Protein TOC75; Provisional
      pfam01103
      Location:311 → 395
      Bac_surface_Ag; Surface antigen
    Nucleotide Protein
    Heading Accession and Version

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