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    gdap1l1 ganglioside induced differentiation associated protein 1-like 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779687, updated on 5-Mar-2024

    Summary

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    Official Symbol
    gdap1l1provided by Xenbase
    Official Full Name
    ganglioside induced differentiation associated protein 1-like 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-950543
    See related
    Ensembl:ENSXETG00000001772
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (38598139..38617074, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (30286760..30304555, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene R3H domain containing-like Neighboring gene fat storage-inducing transmembrane protein 2 Neighboring gene oxidative stress responsive serine-rich 1 Neighboring gene junctophilin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC146673

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ganglioside-induced differentiation-associated protein 1-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078771.1 → NP_001072239.1  ganglioside-induced differentiation-associated protein 1-like 1

      See identical proteins and their annotated locations for NP_001072239.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118835
      UniProtKB/TrEMBL
      F7C406, Q0VFG7
      Related
      ENSXETP00000003684.5, ENSXETT00000003684.5
      Conserved Domains (2) summary
      cl00388
      Location:45 → 117
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
      cl02776
      Location:198 → 308
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      38598139..38617074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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