VTA1 vesicle trafficking 1 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: VTA1provided by VGNC
Official Full Name: vesicle trafficking 1provided by VGNC
Primary source: VGNC:VGNC:79296
See related: Ensembl:ENSMMUG00000023012
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	4	NC_041757.1 (45896635..45975750)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	4	NC_027896.1 (124930635..125008692, complement)

Chromosome 4 - NC_041757.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH104272 (e-PCR)
- UniSTS:98597

RH118728 (e-PCR)
- UniSTS:138053

RH46769 (e-PCR)
- UniSTS:42335

A004F48 (e-PCR)
- UniSTS:56197

D6S1181E (e-PCR)
- UniSTS:51660

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in multivesicular body	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: vacuolar protein sorting-associated protein VTA1 homolog

Names: Vps20-associated 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001261520.1 → NP_001248449.1 vacuolar protein sorting-associated protein VTA1 homolog

See identical proteins and their annotated locations for NP_001248449.1

Status: PROVISIONAL

Source sequence(s)

JV047321

UniProtKB/TrEMBL

A0A1D5R6T2, F6TI07, G8F1G8

Related

ENSMMUP00000030299.4, ENSMMUT00000032383.4

Conserved Domains (1) summary

pfam04652
Location:22 → 152

Vta1; Vta1 like

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041757.1 Reference Mmul_10 Primary Assembly

Range

45896635..45975750

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_028846715.1 → XP_028702548.1 vacuolar protein sorting-associated protein VTA1 homolog isoform X1

UniProtKB/TrEMBL

G8F1G8

Conserved Domains (2) summary

pfam04652
Location:1 → 110

Vta1; Vta1 like

pfam18097
Location:224 → 261

Vta1_C; Vta1 C-terminal domain