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    mymk myomaker, myoblast fusion factor [ Danio rerio (zebrafish) ]

    Gene ID: 415178, updated on 27-Mar-2024

    Summary

    Official Symbol
    mymkprovided by ZNC
    Official Full Name
    myomaker, myoblast fusion factorprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040625-66
    See related
    Ensembl:ENSDARG00000103988 AllianceGenome:ZFIN:ZDB-GENE-040625-66
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    tmem8c; zgc:86927; si:dkey-191h14.1
    Summary
    Involved in myoblast fusion and regulation of skeletal muscle fiber development. Located in membrane. Is expressed in muscle; post-vent region; and trunk. Used to study Carey-Fineman-Ziter syndrome. Human ortholog(s) of this gene implicated in Carey-Fineman-Ziter syndrome. Orthologous to human MYMK (myomaker, myoblast fusion factor). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (65946136..65954173)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (65267038..65275058)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene protein FAM163B-like Neighboring gene ADAMTS-like 2 Neighboring gene tetratricopeptide repeat protein 16 Neighboring gene solute carrier family 2 member 8 Neighboring gene lipocalin 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within muscle organ development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within myoblast fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within_positive_effect myoblast fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myoblast fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myoblast fusion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in plasma membrane fusion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of skeletal muscle hypertrophy ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of skeletal muscle fiber development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    protein myomaker
    Names
    myoblast fusion maker
    myomaker
    transmembrane protein 8C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002088.1NP_001002088.1  protein myomaker

      See identical proteins and their annotated locations for NP_001002088.1

      Status: PROVISIONAL

      Source sequence(s)
      BC071541
      UniProtKB/Swiss-Prot
      Q6IQ69
      Related
      ENSDARP00000132422.1, ENSDART00000161578.2
      Conserved Domains (1) summary
      pfam12036
      Location:7185
      DUF3522; Protein of unknown function (DUF3522)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      65946136..65954173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017356053.2XP_017211542.1  protein myomaker isoform X1

      UniProtKB/TrEMBL
      A0A8M6Z0J1