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    obst-B obstructor-B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34336, updated on 26-Apr-2024

    Summary

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    Official Symbol
    obst-Bprovided by FlyBase
    Official Full Name
    obstructor-Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027600
    Locus tag
    Dmel_CG4778
    See related
    AllianceGenome:FB:FBgn0027600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH02976; BEST:CK00178; CG4778; CK00178; Dmel\CG4778; obst-b
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in chitin-based extracellular matrix. Is expressed in epithelium and foregut. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    30F6-31A1; 2-39 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10032690..10038954)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10032690..10038954)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44874 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A peritrophin-like protein expressed in the embryonic tracheae of Drosophila melanogaster. Barry MK, et al. Insect Biochem Mol Biol, 1999 Apr. PMID 10333571
    2. Peritrophic matrix proteins. Tellam RL, et al. Insect Biochem Mol Biol, 1999 Feb. PMID 10196732
    3. Identification of the novel evolutionary conserved obstructor multigene family in invertebrates. Behr M, et al. FEBS Lett, 2005 Dec 19. PMID 16325182
    4. Drosophila type IV collagen mutation associates with immune system activation and intestinal dysfunction. Kiss M, et al. Matrix Biol, 2016 Jan. PMID 26363084
    5. Systematic identification of genes regulating synaptic remodeling in the Drosophila visual system. Araki T, et al. Genes Genet Syst, 2020 Aug 27. PMID 32493879

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 10033628-10033667 mobile_element_type = transposon:INE-1{}6186

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables chitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    obstructor-B
    Names
    CG4778-PA
    obst-B-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10032690..10038954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135495.3 → NP_609339.1  obstructor-B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609339.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9Y156
      Related
      FBpp0079524
      Conserved Domains (1) summary
      pfam01607
      Location:156 → 204
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9Y156 Q9Y156

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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