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    Trpv4 transient receptor potential cation channel subfamily V member 4 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100751070, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Trpv4
    Gene description
    transient receptor potential cation channel subfamily V member 4
    Locus tag
    I79_010344
    See related
    Ensembl:ENSCGRG00015024132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613978.1 (622829..647412)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (94236983..94261510, complement)

    NW_003613978.1Genomic Context describing neighboring genes Neighboring gene trichoplein keratin filament binding Neighboring gene glycolipid transfer protein Neighboring gene family with sequence similarity 222 member A Neighboring gene mevalonate kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in osmosensory signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 4; transient receptor potential cation channel subfamily V member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613978.1 Reference CriGri_1.0 Primary Assembly

      Range
      622829..647412
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035456606.1 → XP_035312497.1  LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C2MMD7
      Conserved Domains (2) summary
      sd00045
      Location:237 → 268
      ANK; ANK repeat [structural motif]
      cd22195
      Location:103 → 834
      TRPV4; Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 4

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048597.1 Alternate CriGri-PICRH-1.0

      Range
      94236983..94261510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035444337.1 → XP_035300228.1  transient receptor potential cation channel subfamily V member 4 isoform X2

      UniProtKB/TrEMBL
      A0A8C2MMD7, A0A9J7K8P1
      Conserved Domains (2) summary
      sd00045
      Location:203 → 234
      ANK; ANK repeat [structural motif]
      cd22195
      Location:69 → 800
      TRPV4; Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 4

    2. XM_035444340.1 → XP_035300231.1  transient receptor potential cation channel subfamily V member 4 isoform X5

      UniProtKB/TrEMBL
      A0A8C2QLF5, A0A9J7GX17
      Conserved Domains (2) summary
      sd00045
      Location:191 → 231
      ANK; ANK repeat [structural motif]
      cl40437
      Location:103 → 727
      TRPV; Transient Receptor Potential channel, Vanilloid subfamily (TRPV)

    3. XM_035444338.1 → XP_035300229.1  transient receptor potential cation channel subfamily V member 4 isoform X3

      UniProtKB/TrEMBL
      A0A8C2MPP9, A0A9J7GZT2
      Related
      ENSCGRP00015032204.2, ENSCGRT00015039303.2
      Conserved Domains (2) summary
      sd00045
      Location:191 → 231
      ANK; ANK repeat [structural motif]
      cl40437
      Location:103 → 787
      TRPV; Transient Receptor Potential channel, Vanilloid subfamily (TRPV)

    4. XM_035444339.1 → XP_035300230.1  transient receptor potential cation channel subfamily V member 4 isoform X4

      UniProtKB/TrEMBL
      A0A8C2QLF5, A0A9J7GZD8
      Related
      ENSCGRP00015032214.2, ENSCGRT00015039315.2
      Conserved Domains (2) summary
      sd00045
      Location:237 → 268
      ANK; ANK repeat [structural motif]
      cl40437
      Location:103 → 774
      TRPV; Transient Receptor Potential channel, Vanilloid subfamily (TRPV)

    5. XM_035444336.1 → XP_035300227.1  transient receptor potential cation channel subfamily V member 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C2MMD7, A0A9J7H0P9
      Related
      ENSCGRP00015032194.2, ENSCGRT00015039293.2
      Conserved Domains (2) summary
      sd00045
      Location:237 → 268
      ANK; ANK repeat [structural motif]
      cd22195
      Location:103 → 834
      TRPV4; Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 4
    Nucleotide Protein Strain
    Heading Accession and Version

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