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    Phactr1 phosphatase and actin regulator 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100726748, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Phactr1
    Gene description
    phosphatase and actin regulator 1
    See related
    Ensembl:ENSCPOG00000005061
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947496.1 (17410584..17919455)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176381.1 (8772894..9068343)

    NW_026947496.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134478499 Neighboring gene nuclear receptor coactivator 6-like Neighboring gene uncharacterized LOC134478500 Neighboring gene ER membrane protein complex subunit 5-like Neighboring gene uncharacterized LOC134478502 Neighboring gene TBC1 domain family member 7 Neighboring gene Gfo/Idh/MocA-like oxidoreductase domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in stress fiber assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatase and actin regulator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947496.1 Reference mCavPor4.1

      Range
      17410584..17919455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063259891.1 → XP_063115961.1  phosphatase and actin regulator 1 isoform X5

    2. XM_063259893.1 → XP_063115963.1  phosphatase and actin regulator 1 isoform X6

      UniProtKB/TrEMBL
      A0A286XZL8

    3. XM_063259894.1 → XP_063115964.1  phosphatase and actin regulator 1 isoform X7

      UniProtKB/TrEMBL
      H0V4K4

    4. XM_063259892.1 → XP_063115962.1  phosphatase and actin regulator 1 isoform X5

    5. XM_005003272.4 → XP_005003329.1  phosphatase and actin regulator 1 isoform X8

      UniProtKB/TrEMBL
      A0A286X9F8
      Related
      ENSCPOP00000022062.1
      Conserved Domains (2) summary
      smart00707
      Location:439 → 463
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:47 → 69
      RPEL; RPEL repeat

    6. XM_023564711.2 → XP_023420479.1  phosphatase and actin regulator 1 isoform X8

      UniProtKB/TrEMBL
      A0A286X9F8
      Related
      ENSCPOP00000024471.1
      Conserved Domains (2) summary
      smart00707
      Location:439 → 463
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:47 → 69
      RPEL; RPEL repeat

    7. XM_005003267.4 → XP_005003324.3  phosphatase and actin regulator 1 isoform X1

      UniProtKB/TrEMBL
      A0A286X9F8
      Conserved Domains (2) summary
      smart00707
      Location:528 → 552
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:136 → 158
      RPEL; RPEL repeat

    8. XM_005003268.4 → XP_005003325.3  phosphatase and actin regulator 1 isoform X2

      UniProtKB/TrEMBL
      A0A286X9F8
      Related
      ENSCPOP00000032199.1
      Conserved Domains (2) summary
      smart00707
      Location:527 → 551
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:136 → 158
      RPEL; RPEL repeat

    9. XM_005003270.4 → XP_005003327.3  phosphatase and actin regulator 1 isoform X3

      UniProtKB/TrEMBL
      A0A286X9F8
      Conserved Domains (2) summary
      smart00707
      Location:459 → 483
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:136 → 158
      RPEL; RPEL repeat

    10. XM_023564710.2 → XP_023420478.1  phosphatase and actin regulator 1 isoform X4

      UniProtKB/TrEMBL
      A0A286X9F8
      Conserved Domains (2) summary
      smart00707
      Location:458 → 482
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:136 → 158
      RPEL; RPEL repeat
    Nucleotide Protein
    Heading Accession and Version

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