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    LOC100533630 chimerin 1 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100533630, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC100533630
    Gene description
    chimerin 1 pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    4q35.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (183380344..183381902)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (186723426..186724984)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (184301497..184303055)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene claudin 24 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_76759 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:184269461-184270660 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:184279278-184279778 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:184319106-184319897 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:184328963-184329801 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:184340331-184340831 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:184351159-184351908 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:184351909-184352659 Neighboring gene FBL pseudogene 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:184359150-184360349 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15827 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22184 Neighboring gene CDKN2A interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_028851.2 

      Range
      101..1659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      183380344..183381902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      186723426..186724984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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