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    STOML2 stomatin like 2 [ Equus caballus (horse) ]

    Gene ID: 100055756, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STOML2provided by VGNC
    Official Full Name
    stomatin like 2provided by VGNC
    Primary source
    VGNC:VGNC:23705
    See related
    Ensembl:ENSECAG00000017691
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 25 NC_009168.3 (448895..452284, complement)

    Chromosome 25 - NC_009168.3Genomic Context describing neighboring genes Neighboring gene FA complementation group G Neighboring gene phosphatidylinositol glycan anchor biosynthesis class O Neighboring gene atos homolog B Neighboring gene unc-13 homolog B Neighboring gene poly(A) polymerase alpha pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009168.3 Chromosome 25 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stomatin-like protein 2, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009168.3 Reference EquCab3.0 Primary Assembly

      Range
      448895..452284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014735877.2 → XP_014591363.1  stomatin-like protein 2, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A9L0SFY1, A0A9L0TDC4
      Related
      ENSECAP00000073755.1, ENSECAT00000140549.1
      Conserved Domains (3) summary
      COG0330
      Location:106 → 324
      HflC; Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational modification, protein turnover, chaperones]
      cd08829
      Location:106 → 194
      SPFH_paraslipin; Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
      pfam16200
      Location:269 → 331
      Band_7_C; C-terminal region of band_7

    2. XM_001504533.5 → XP_001504583.1  stomatin-like protein 2, mitochondrial isoform X3

      See identical proteins and their annotated locations for XP_001504583.1

      UniProtKB/TrEMBL
      A0A5F5PXJ3, F6R2L2
      Related
      ENSECAP00000015477.3, ENSECAT00000018940.4
      Conserved Domains (3) summary
      COG0330
      Location:41 → 314
      HflC; Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational modification, protein turnover, chaperones]
      cd08829
      Location:74 → 184
      SPFH_paraslipin; Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
      pfam16200
      Location:259 → 321
      Band_7_C; C-terminal region of band_7

    3. XM_023629639.1 → XP_023485407.1  stomatin-like protein 2, mitochondrial isoform X2

      Conserved Domains (2) summary
      COG0330
      Location:102 → 320
      HflC; Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational modification, protein turnover, chaperones]
      cd08829
      Location:102 → 190
      SPFH_paraslipin; Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    4. XM_014735878.2 → XP_014591364.1  stomatin-like protein 2, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A5F5PXJ3
      Related
      ENSECAP00000065816.1, ENSECAT00000120147.1
      Conserved Domains (3) summary
      COG0330
      Location:2 → 263
      HflC; Regulator of protease activity HflC, stomatin/prohibitin superfamily [Posttranslational modification, protein turnover, chaperones]
      cd08829
      Location:23 → 133
      SPFH_paraslipin; Paraslipin or slipin-2 (SLP-2, a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
      pfam16200
      Location:208 → 270
      Band_7_C; C-terminal region of band_7
    Nucleotide Protein
    Heading Accession and Version

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