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    cyp7a1 cytochrome P450 family 7 subfamily A member 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488670, updated on 25-Apr-2024

    Summary

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    Official Symbol
    cyp7a1provided by Xenbase
    Official Full Name
    cytochrome P450 family 7 subfamily A member 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-485170
    See related
    Ensembl:ENSXETG00000005661
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    cyp7; cyp7a
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (116352903..116357128, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (101473625..101477120, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 110 member B Neighboring gene UBX domain protein 2B Neighboring gene syndecan binding protein Neighboring gene neutral sphingomyelinase activation associated factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables cholesterol 7-alpha-monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within bile acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cellular response to glucose stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cholesterol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cholesterol homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450 7A1
    Names
    cholesterol 7-alpha-monooxygenase
    cytochrome P450, family 7, subfamily A, polypeptide 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      116352903..116357128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002936108.5 → XP_002936154.1  cytochrome P450 7A1

      UniProtKB/TrEMBL
      A0A803J9C9, F6Y5A0
      Related
      ENSXETP00000104429.1, ENSXETT00000123346.1
      Conserved Domains (1) summary
      cl12078
      Location:29 → 478
      p450; Cytochrome P450
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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