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    LOC660514 heterogeneous nuclear ribonucleoprotein H [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 660514, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC660514
    Gene description
    heterogeneous nuclear ribonucleoprotein H
    Locus tag
    TcasGA2_TC004364
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 7 NC_087400.1 (147120..149769)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG10 NC_007425.3 (7095186..7097817, complement)

    Chromosome 7 - NC_087400.1Genomic Context describing neighboring genes Neighboring gene protein TEX261 Neighboring gene polyadenylate-binding protein 4-like Neighboring gene NADH dehydrogenase (ubiquinone) SGDH subunit Neighboring gene mob as tumor suppressor Neighboring gene THADA Neighboring gene Branched chain keto acid dehydrogenase E1 subunit alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein H
    Names
    AUGUSTUS-3.0.2_04364
    GLEAN_04364
    RNA-binding protein fusilli-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087400.1 Reference icTriCast1.1 Primary Assembly

      Range
      147120..149769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008202102.3 → XP_008200324.1  heterogeneous nuclear ribonucleoprotein H

      See identical proteins and their annotated locations for XP_008200324.1

      UniProtKB/TrEMBL
      D6X545
      Conserved Domains (3) summary
      cd12503
      Location:11 → 86
      RRM1_hnRNPH_GRSF1_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12504
      Location:109 → 185
      RRM2_hnRNPH_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family
      cd12506
      Location:288 → 362
      RRM3_hnRNPH_CRSF1_like; RNA recognition motif 3 in heterogeneous nuclear ribonucleoprotein hnRNP H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins

    2. XM_966739.4 → XP_971832.1  heterogeneous nuclear ribonucleoprotein H

      See identical proteins and their annotated locations for XP_971832.1

      UniProtKB/TrEMBL
      D6X545
      Conserved Domains (3) summary
      cd12503
      Location:11 → 86
      RRM1_hnRNPH_GRSF1_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12504
      Location:109 → 185
      RRM2_hnRNPH_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family
      cd12506
      Location:288 → 362
      RRM3_hnRNPH_CRSF1_like; RNA recognition motif 3 in heterogeneous nuclear ribonucleoprotein hnRNP H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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