U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100162140 annulin [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100162140, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100162140
    Gene description
    annulin
    See related
    APHIDBASE:ACYPI003313; EnsemblRapid:LOC100162140
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: X
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) X NC_042493.1 (27150337..27181841, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383536.1 (1491915..1523422, complement)

    Chromosome X - NC_042493.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100570780 Neighboring gene uncharacterized LOC103307871 Neighboring gene uncharacterized LOC107882437 Neighboring gene uncharacterized LOC107882431 Neighboring gene putative nuclease HARBI1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-glutamine gamma-glutamyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptide cross-linking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    annulin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042493.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      27150337..27181841 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008180267.3 → XP_008178489.1  annulin isoform X1

      UniProtKB/TrEMBL
      A0A8R2B0U3
      Related
      XP_008178489.1, XM_008180267.3
      Conserved Domains (3) summary
      smart00460
      Location:325 → 416
      TGc; Transglutaminase/protease-like homologues
      pfam00868
      Location:53 → 181
      Transglut_N; Transglutaminase family
      pfam00927
      Location:537 → 643
      Transglut_C; Transglutaminase family, C-terminal ig like domain

    2. XM_003241397.4 → XP_003241445.1  annulin isoform X2

      UniProtKB/TrEMBL
      A0A8R2A7G1
      Related
      XP_003241445.1, XM_003241397.4
      Conserved Domains (3) summary
      smart00460
      Location:286 → 377
      TGc; Transglutaminase/protease-like homologues
      pfam00868
      Location:14 → 142
      Transglut_N; Transglutaminase family
      pfam00927
      Location:498 → 604
      Transglut_C; Transglutaminase family, C-terminal ig like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases