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    LOC100162952 dnaJ homolog subfamily C member 21 [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100162952, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100162952
    Gene description
    dnaJ homolog subfamily C member 21
    See related
    APHIDBASE:ACYPI004071; EnsemblRapid:LOC100162952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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    Genomic context

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    Location:
    chromosome: A1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (72652435..72654609, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383560.1 (1592118..1594287)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial Neighboring gene tubulin beta chain Neighboring gene ribosomal protein 63, mitochondrial Neighboring gene apoptosis-inducing factor 3 Neighboring gene DNA repair protein XRCC3 Neighboring gene protein MEMO1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dnaJ homolog subfamily C member 21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      72652435..72654609 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001943295.5 → XP_001943330.2  dnaJ homolog subfamily C member 21

      UniProtKB/TrEMBL
      A0A8R1W0B0
      Related
      XP_001943330.2, XM_001943295.5
      Conserved Domains (5) summary
      PTZ00121
      Location:181 → 407
      PTZ00121; MAEBL; Provisional
      COG5269
      Location:19 → 245
      ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
      PRK10767
      Location:2 → 66
      PRK10767; chaperone protein DnaJ; Provisional
      sd00020
      Location:293 → 315
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:291 → 316
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    Nucleotide Protein
    Heading Accession and Version

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